RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Q9D9H8 365 aa20.49■□□□□ 0.87
Shroom3-201ENSMUST00000113051 Hmox1P14901 289 aa20.49■□□□□ 0.87
Shroom3-201ENSMUST00000113051 Ddx11Q6AXC6 880 aa20.49■□□□□ 0.87
Shroom3-201ENSMUST00000113051 Ylpm1Q9R0I7 1386 aaKnown RBP20.48■□□□□ 0.87
Shroom3-201ENSMUST00000113051 Esx1O88933 382 aa20.48■□□□□ 0.87
Shroom3-201ENSMUST00000113051 Nap1l3Q794H2 544 aa20.48■□□□□ 0.87
Shroom3-201ENSMUST00000113051 Tpm2P58774 284 aa20.48■□□□□ 0.87
Shroom3-201ENSMUST00000113051 Trim30aP15533 496 aa20.47■□□□□ 0.87
Shroom3-201ENSMUST00000113051 Gtf2f1Q3THK3 508 aaKnown RBP20.46■□□□□ 0.87
Shroom3-201ENSMUST00000113051 Zranb3Q6NZP1 1069 aa20.46■□□□□ 0.87
Shroom3-201ENSMUST00000113051 Stk3Q9JI10 497 aa20.46■□□□□ 0.87
Shroom3-201ENSMUST00000113051 Ric3Q8BPM6 367 aa20.46■□□□□ 0.87
Shroom3-201ENSMUST00000113051 Rad54l2Q99NG0 1466 aa20.45■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Cfdp1O88271 295 aaKnown RBP20.45■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Filip1lQ6P6L0 1131 aa20.45■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Taok2Q6ZQ29 1240 aa20.45■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Atp6v1dP57746 247 aa20.45■□□□□ 0.86
Shroom3-201ENSMUST00000113051 IbspQ61711 324 aa20.45■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Cc2d2bA0A286YDU8 1405 aa20.44■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Cplx1P63040 134 aa20.44■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Mphosph10Q810V0 681 aaKnown RBP20.44■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Fbln2P37889 1221 aa20.43■□□□□ 0.86
Shroom3-201ENSMUST00000113051 March6Q6ZQ89 909 aa20.43■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Utp3Q9JI13 469 aaKnown RBP20.43■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Nol12Q8BG17 217 aa20.43■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Rapgef2Q8CHG7 1496 aa20.43■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Fam184bQ0KK56 942 aa20.43■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Ftsj3Q9DBE9 838 aaKnown RBP20.43■□□□□ 0.86
Shroom3-201ENSMUST00000113051 TatQ8QZR1 454 aa20.43■□□□□ 0.86
Shroom3-201ENSMUST00000113051 SetQ9EQU5 289 aaKnown RBP20.43■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Rec8Q8C5S7 591 aa20.42■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Stard8Q8K031 1019 aa20.42■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Smg7Q5RJH6 1138 aaKnown RBP20.41■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Cgnl1Q6AW69 1298 aa20.41■□□□□ 0.86
Shroom3-201ENSMUST00000113051 St18Q80TY4 1045 aa20.41■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Sh3bgrQ9WUZ7 214 aa20.41■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Tdrd9Q14BI7 1383 aa20.41■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Hnrnpul1Q8VDM6 859 aaKnown RBP20.41■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Gsto1O09131 240 aa20.4■□□□□ 0.86
Shroom3-201ENSMUST00000113051 ErbinQ80TH2 1402 aa20.4■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Kdm4aQ8BW72 1064 aa20.4■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Bicd2Q921C5 820 aa20.4■□□□□ 0.86
Shroom3-201ENSMUST00000113051 Phldb1Q6PDH0 1371 aaKnown RBP20.4■□□□□ 0.86
Shroom3-201ENSMUST00000113051 MpripP97434 1024 aa20.38■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Rab11fip3Q8CHD8 1047 aa20.38■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Cnnm1Q0GA42 951 aa20.37■□□□□ 0.85
Shroom3-201ENSMUST00000113051 NexnQ7TPW1 607 aa20.37■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Carmil1Q6EDY6 1374 aa20.37■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Cplx2P84086 134 aa20.37■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Mad1l1Q9WTX8 717 aaKnown RBP20.37■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Nolc1E9Q5C9 702 aaKnown RBP20.37■□□□□ 0.85
Shroom3-201ENSMUST00000113051 IkQ9Z1M8 557 aaKnown RBP20.37■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Tpm1P58771 284 aa20.37■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Stk11ipQ3TAA7 1072 aa20.36■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Gsdma3Q5Y4Y6 464 aa20.35■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Kcnn1Q9EQR3 537 aa20.35■□□□□ 0.85
Shroom3-201ENSMUST00000113051 ArsiQ32KI9 573 aa20.35■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Rsph3aQ3UFY4 516 aa20.34■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Cdca7Q9D0M2 382 aa20.34■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Srek1Q8BZX4 494 aaKnown RBP20.34■□□□□ 0.85
Shroom3-201ENSMUST00000113051 UacaQ8CGB3 1411 aa20.34■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Rock1P70335 1354 aa20.34■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Fkbp4P30416 458 aa20.34■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Me1P06801 572 aa20.33■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Casq1O09165 405 aa20.33■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Becn1O88597 448 aa20.33■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Sv2bQ8BG39 683 aa20.33■□□□□ 0.85
Shroom3-201ENSMUST00000113051 Erich4Q3UNU4 136 aa20.33■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Q9D2X8 372 aa20.33■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Atp2b2Q9R0K7 1198 aa20.33■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Ell2Q3UKU1 639 aa20.33■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Evc2Q8K1G2 1220 aa20.32■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Cecr2E9Q2Z1 1453 aa20.32■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Gm21698A0A087WQP8 267 aa20.32■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Gm21671G3UY31 267 aa20.32■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Rbm25B2RY56 838 aaKnown RBP20.32■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Zscan10Q3URR7 782 aa20.31■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Pank1Q8K4K6 548 aa20.31■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Sycp1Q62209 993 aa20.3■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Jph4Q80WT0 628 aa20.3■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Usp48Q3V0C5 1052 aa20.29■□□□□ 0.84
Shroom3-201ENSMUST00000113051 KinQ8K339 391 aa20.29■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Cspp1B2RX88 1205 aa20.29■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Dapk1Q80YE7 1442 aa20.28■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Rrp12Q6P5B0 1295 aaKnown RBP20.28■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Tmc1Q8R4P5 757 aa20.28■□□□□ 0.84
Shroom3-201ENSMUST00000113051 PogkQ80TC5 607 aa20.28■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Smc3Q9CW03 1217 aaKnown RBP20.28■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Dhx29Q6PGC1 1365 aaKnown RBP20.27■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Nap1l1P28656 391 aaKnown RBP20.27■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Rnf20Q5DTM8 973 aa20.27■□□□□ 0.84
Shroom3-201ENSMUST00000113051 Dmrt2Q8BG36 561 aa20.27■□□□□ 0.83
Shroom3-201ENSMUST00000113051 Bcl11aQ9QYE3 773 aa20.27■□□□□ 0.83
Shroom3-201ENSMUST00000113051 Puf60Q3UEB3 564 aaKnown RBP20.27■□□□□ 0.83
Shroom3-201ENSMUST00000113051 Speer4bQ9D9F7 267 aa20.27■□□□□ 0.83
Shroom3-201ENSMUST00000113051 Cyb5rlB1AS42 316 aa20.26■□□□□ 0.83
Shroom3-201ENSMUST00000113051 Babam1Q3UI43 333 aa20.26■□□□□ 0.83
Shroom3-201ENSMUST00000113051 Bicdl1A0JNT9 577 aa20.26■□□□□ 0.83
Shroom3-201ENSMUST00000113051 Synj1Q8CHC4 1574 aa20.25■□□□□ 0.83
Shroom3-201ENSMUST00000113051 Agtpbp1Q641K1 1218 aa20.25■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms