RNA–Protein interactions for RNA: ENSMUST00000112523.7

Clstn3-202, Transcript of Calsyntenin-3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clstn3, Length 3,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn3-202ENSMUST00000112523 U2surpQ6NV83 1029 aaKnown RBP12.25□□□□□ -0.45
Clstn3-202ENSMUST00000112523 Fam208aQ69ZR9 1610 aaKnown RBP12.25□□□□□ -0.45
Clstn3-202ENSMUST00000112523 Tnnt1O88346 262 aa12.25□□□□□ -0.45
Clstn3-202ENSMUST00000112523 GnpatP98192 678 aa12.25□□□□□ -0.45
Clstn3-202ENSMUST00000112523 Slc4a3P16283 1227 aa12.24□□□□□ -0.45
Clstn3-202ENSMUST00000112523 Zscan21Q07231 555 aa12.24□□□□□ -0.45
Clstn3-202ENSMUST00000112523 Naip6Q9JIB6 1403 aa12.24□□□□□ -0.45
Clstn3-202ENSMUST00000112523 Smg6P61406 1418 aaKnown RBP12.23□□□□□ -0.45
Clstn3-202ENSMUST00000112523 NpatQ8BMA5 1420 aa12.22□□□□□ -0.45
Clstn3-202ENSMUST00000112523 Armcx1Q9CX83 456 aa12.22□□□□□ -0.45
Clstn3-202ENSMUST00000112523 Mapk8ip3Q9ESN9 1337 aa12.22□□□□□ -0.45
Clstn3-202ENSMUST00000112523 Cdk13Q69ZA1 1511 aaKnown RBP12.22□□□□□ -0.45
Clstn3-202ENSMUST00000112523 Tsen2Q6P7W5 460 aa12.22□□□□□ -0.45
Clstn3-202ENSMUST00000112523 Col17a1Q07563 1470 aa12.21□□□□□ -0.45
Clstn3-202ENSMUST00000112523 Tmem94Q7TSH8 1360 aa12.21□□□□□ -0.45
Clstn3-202ENSMUST00000112523 Slc4a2P13808 1237 aaKnown RBP12.21□□□□□ -0.45
Clstn3-202ENSMUST00000112523 Tnnt3Q9QZ47 272 aa12.21□□□□□ -0.45
Clstn3-202ENSMUST00000112523 Calr4Q3TQS0 420 aa12.21□□□□□ -0.45
Clstn3-202ENSMUST00000112523 GphnQ8BUV3 769 aaKnown RBP12.21□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Znf330Q922H9 316 aa12.21□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Pik3c2gO70167 1506 aa12.21□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Anks4bQ8K3X6 423 aa12.2□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Acsbg1Q99PU5 721 aa12.2□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Fndc1E9Q043 1732 aa12.2□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Gm10563F6WIE4 79 aa12.2□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Apaf1O88879 1249 aa12.2□□□□□ -0.46
Clstn3-202ENSMUST00000112523 PrxO55103 1391 aa12.2□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Golga2Q921M4 999 aa12.19□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Zfyve16Q80U44 1528 aa12.19□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Zcchc11B2RX14 1644 aaKnown RBP12.18□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Ddx17Q501J6 650 aaKnown RBP12.18□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Rtn4Q99P72 1162 aaKnown RBP12.18□□□□□ -0.46
Clstn3-202ENSMUST00000112523 AatkQ80YE4 1365 aa12.18□□□□□ -0.46
Clstn3-202ENSMUST00000112523 AU022751B1B0V2 589 aa12.18□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Cfap74Q3UY96 1578 aa12.18□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Fyb1O35601 819 aa12.17□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Pak3Q61036 559 aa12.17□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Usp54Q8BL06 1588 aaKnown RBP12.17□□□□□ -0.46
Clstn3-202ENSMUST00000112523 NhsB1AV60 1647 aa12.17□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Q3UJC8 639 aa12.17□□□□□ -0.46
Clstn3-202ENSMUST00000112523 DiexfQ8BTT6 772 aaKnown RBP12.17□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Ppp4r2Q0VGB7 417 aa12.16□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Ddx54Q8K4L0 874 aaKnown RBP12.16□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Atf3Q60765 181 aa12.16□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Adgrl2Q8JZZ7 1487 aa12.16□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Tmco5bQ80X59 307 aa12.15□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Mug2P28666 1451 aa12.15□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Prrc2bQ7TPM1 1486 aaKnown RBP12.15□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Edc4Q3UJB9 1406 aaKnown RBP12.15□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Supt6hQ62383 1726 aaKnown RBP12.15□□□□□ -0.46
Clstn3-202ENSMUST00000112523 Q8BT18 775 aa12.15□□□□□ -0.46
Clstn3-202ENSMUST00000112523 PtprgQ05909 1442 aa12.14□□□□□ -0.47
Clstn3-202ENSMUST00000112523 MpripP97434 1024 aa12.14□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Ppp2r1aQ76MZ3 589 aa12.14□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Stard8Q8K031 1019 aa12.14□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Polr3aB2RXC6 1390 aa12.13□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Fmn2Q9JL04 1578 aa12.13□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Mak16Q8BGS0 296 aaKnown RBP12.13□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Dbr1Q923B1 550 aa12.13□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Kif16bB1AVY7 1312 aa12.12□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Tarbp1E9Q368 1579 aa12.12□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Synj2Q9D2G5 1434 aa12.12□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Abca8bQ8K440 1620 aa12.11□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Abcc6Q9R1S7 1498 aa12.11□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.11□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Ksr2Q3UVC0 959 aa12.11□□□□□ -0.47
Clstn3-202ENSMUST00000112523 GsdmaQ9EST1 446 aa12.11□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Slc52a2Q9D8F3 450 aa12.1□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Hfm1D3Z4R1 1434 aa12.1□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Mcm10Q0VBD2 885 aa12.1□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Asxl1P59598 1514 aa12.09□□□□□ -0.47
Clstn3-202ENSMUST00000112523 Nos1Q9Z0J4 1429 aa12.08□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Skint5A7XUY5 1461 aa12.07□□□□□ -0.48
Clstn3-202ENSMUST00000112523 TatQ8QZR1 454 aa12.07□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Rock1P70335 1354 aa12.06□□□□□ -0.48
Clstn3-202ENSMUST00000112523 B4galnt3Q6L8S8 986 aa12.06□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Rnf17Q99MV7 1640 aa12.06□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Cdc42bpbQ7TT50 1713 aa12.06□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Camsap2Q8C1B1 1461 aa12.06□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Kif1bQ60575 1816 aaKnown RBP12.06□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Bcl2l13P59017 434 aa12.06□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Tmem132eQ6IEE6 982 aa12.06□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Gm32742A0A1B0GT42 1604 aa12.06□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Mast1Q9R1L5 1570 aa12.06□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Ncoa1P70365 1447 aa12.05□□□□□ -0.48
Clstn3-202ENSMUST00000112523 CenpbP27790 599 aa12.05□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Nectin2P32507 530 aa12.05□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Kif14L0N7N1 1674 aaKnown RBP12.05□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Atp10aO54827 1508 aa12.04□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Cul7Q8VE73 1689 aa12.04□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Atxn3Q9CVD2 355 aa12.04□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Dip2cE9PWR4 1557 aa12.04□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Abcc3B2RX12 1523 aa12.04□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Rtf1A2AQ19 715 aaKnown RBP12.04□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Gm10471E9Q1C7 252 aa12.03□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Nutm1Q8BHP2 1126 aa12.03□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Plekhg5Q66T02 1073 aa12.03□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Idi1P58044 227 aa12.03□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Dennd6aQ8BH65 605 aa12.03□□□□□ -0.48
Clstn3-202ENSMUST00000112523 Cluap1Q8R3P7 413 aa12.02□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms