RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Mfap1aC0HKD8 439 aaKnown RBP10.6□□□□□ -0.71
Bdnf-210ENSMUST00000111051 Mfap1bC0HKD9 439 aaKnown RBP10.6□□□□□ -0.71
Bdnf-210ENSMUST00000111051 Ythdc1E9Q5K9 736 aaKnown RBP10.6□□□□□ -0.71
Bdnf-210ENSMUST00000111051 Atl3Q91YH5 541 aa10.59□□□□□ -0.71
Bdnf-210ENSMUST00000111051 Fhod3Q76LL6 1578 aa10.59□□□□□ -0.71
Bdnf-210ENSMUST00000111051 Pprc1Q6NZN1 1644 aa10.59□□□□□ -0.71
Bdnf-210ENSMUST00000111051 Cpsf1Q9EPU4 1441 aaKnown RBP10.59□□□□□ -0.71
Bdnf-210ENSMUST00000111051 Arhgap5P97393 1501 aa10.58□□□□□ -0.71
Bdnf-210ENSMUST00000111051 Vsig10D3YX43 558 aa10.58□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Wdr7Q920I9 1489 aa10.58□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Kdm3bQ6ZPY7 1562 aa10.58□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Tsen2Q6P7W5 460 aa10.58□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Pank1Q8K4K6 548 aa10.58□□□□□ -0.72
Bdnf-210ENSMUST00000111051 ErbinQ80TH2 1402 aa10.58□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Rabep1O35551 862 aa10.57□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Rapgef6Q5NCJ1 1609 aa10.57□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Fam135aQ6NS59 1506 aa10.57□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Gcc2Q8CHG3 1679 aa10.57□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Smc5Q8CG46 1101 aaKnown RBP10.56□□□□□ -0.72
Bdnf-210ENSMUST00000111051 CenpjQ569L8 1344 aa10.56□□□□□ -0.72
Bdnf-210ENSMUST00000111051 HnrnpuQ8VEK3 800 aaKnown RBP10.56□□□□□ -0.72
Bdnf-210ENSMUST00000111051 WizO88286 1684 aaKnown RBP10.56□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Cul7Q8VE73 1689 aa10.56□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Arhgef40Q3UPH7 1517 aa10.56□□□□□ -0.72
Bdnf-210ENSMUST00000111051 PxdnQ3UQ28 1475 aa10.56□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Disp1Q3TDN0 1521 aa10.55□□□□□ -0.72
Bdnf-210ENSMUST00000111051 PtmaP26350 111 aa10.55□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Zmym4A2A791 1549 aaKnown RBP10.55□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Mink1Q9JM52 1308 aa10.55□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Adgrb2Q8CGM1 1561 aa10.55□□□□□ -0.72
Bdnf-210ENSMUST00000111051 KarsQ99MN1 595 aaKnown RBP10.55□□□□□ -0.72
Bdnf-210ENSMUST00000111051 TimelessQ9R1X4 1197 aa10.55□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Znf692Q3U381 531 aa10.54□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Tmco5bQ80X59 307 aa10.54□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Arid3cA6PWV5 409 aa10.54□□□□□ -0.72
Bdnf-210ENSMUST00000111051 NgefQ8CHT1 710 aa10.54□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Abca5Q8K448 1642 aa10.54□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Dennd4bQ3U1Y4 1499 aa10.53□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Ppp2r3aB2RXC8 1150 aa10.53□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Znf330Q922H9 316 aa10.53□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Map3k5O35099 1380 aa10.53□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Ciz1Q8VEH2 845 aa10.53□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Stk26Q99JT2 416 aa10.53□□□□□ -0.72
Bdnf-210ENSMUST00000111051 Magi3Q9EQJ9 1476 aa10.53□□□□□ -0.72
Bdnf-210ENSMUST00000111051 PtmsQ9D0J8 101 aaKnown RBP10.52□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Scaf1Q5U4C3 1256 aaKnown RBP10.52□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Rbm10Q99KG3 930 aaKnown RBP10.52□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Puf60Q3UEB3 564 aaKnown RBP10.51□□□□□ -0.73
Bdnf-210ENSMUST00000111051 TnikP83510 1323 aa10.51□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Rsph3aQ3UFY4 516 aa10.51□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Erbb3Q61526 1339 aa10.51□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Fgd6Q69ZL1 1399 aa10.51□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Ccdc60Q8C4J0 545 aa10.51□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Adcy10Q8C0T9 1614 aa10.51□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Atf7ipQ7TT18 1306 aa10.5□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Shroom2A2ALU4 1481 aa10.5□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Kif21aQ9QXL2 1672 aa10.5□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Atp7aQ64430 1491 aa10.5□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Cdk13Q69ZA1 1511 aaKnown RBP10.49□□□□□ -0.73
Bdnf-210ENSMUST00000111051 G3bp1P97855 465 aaKnown RBP10.49□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Rrp12Q6P5B0 1295 aaKnown RBP10.49□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Tnpo1Q8BFY9 898 aaKnown RBP10.49□□□□□ -0.73
Bdnf-210ENSMUST00000111051 AlkP97793 1621 aa10.48□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Cgnl1Q6AW69 1298 aa10.48□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Tspyl2Q7TQI8 677 aa10.48□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Tmc1Q8R4P5 757 aa10.48□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Sptbn5F6UCX4 1208 aa10.48□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Ppp1r9bQ6R891 817 aaKnown RBP10.48□□□□□ -0.73
Bdnf-210ENSMUST00000111051 PtprgQ05909 1442 aa10.47□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Map4k4P97820 1233 aaKnown RBP10.47□□□□□ -0.73
Bdnf-210ENSMUST00000111051 GorabQ8BRM2 368 aa10.47□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Gm14025A2AP89 1413 aa10.47□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Ddrgk1Q80WW9 315 aa10.47□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Neo1P97798 1493 aa10.47□□□□□ -0.73
Bdnf-210ENSMUST00000111051 Nkx1-2P42580 305 aa10.46□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Setbp1Q9Z180 1582 aa10.46□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Fancd2Q80V62 1450 aa10.46□□□□□ -0.74
Bdnf-210ENSMUST00000111051 U2surpQ6NV83 1029 aaKnown RBP10.46□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Adgrl2Q8JZZ7 1487 aa10.45□□□□□ -0.74
Bdnf-210ENSMUST00000111051 1700019A02RikA0A087WPV9 146 aa10.45□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Vgll3P85442 326 aa10.45□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Lamc1P02468 1607 aaKnown RBP10.45□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Adamts12Q811B3 1600 aa10.45□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Apaf1O88879 1249 aa10.45□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Sbno1Q689Z5 1390 aa10.45□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Unc13aQ4KUS2 1712 aa10.45□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Cald1E9QA15 768 aaKnown RBP10.44□□□□□ -0.74
Bdnf-210ENSMUST00000111051 SlkO54988 1233 aa10.44□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Cetn4Q8K4K1 168 aa10.44□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Ssh2Q5SW75 1423 aa10.44□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Birc3O08863 600 aa10.44□□□□□ -0.74
Bdnf-210ENSMUST00000111051 SkilQ60665 675 aa10.44□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Prex2Q3LAC4 1598 aa10.44□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Phf14Q9D4H9 881 aa10.44□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Erich6bQ9D4S6 220 aa10.44□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Map3k4O08648 1597 aa10.44□□□□□ -0.74
Bdnf-210ENSMUST00000111051 MccE9PWI3 1003 aa10.43□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Ccdc171E9Q1U1 1324 aa10.43□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Kdm2bQ6P1G2 1309 aa10.43□□□□□ -0.74
Bdnf-210ENSMUST00000111051 Rfx1P48377 963 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms