RNA–Protein interactions for RNA: ENSMUST00000105413.7

Col6a2-202, Transcript of Collagen alpha-2(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a2, Length 4,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2-202ENSMUST00000105413 MccE9PWI3 1003 aa17.1■□□□□ 0.33
Col6a2-202ENSMUST00000105413 MlecQ6ZQI3 291 aaKnown RBP17.09■□□□□ 0.33
Col6a2-202ENSMUST00000105413 Pabpn1Q8CCS6 302 aaKnown RBP17.09■□□□□ 0.33
Col6a2-202ENSMUST00000105413 PrxO55103 1391 aa17.09■□□□□ 0.33
Col6a2-202ENSMUST00000105413 Mre11Q61216 706 aa17.08■□□□□ 0.32
Col6a2-202ENSMUST00000105413 Tnnt1O88346 262 aa17.07■□□□□ 0.32
Col6a2-202ENSMUST00000105413 Stk31Q99MW1 1018 aa17.07■□□□□ 0.32
Col6a2-202ENSMUST00000105413 CatipB9EKE5 520 aa17.06■□□□□ 0.32
Col6a2-202ENSMUST00000105413 Casc1Q6TDU8 730 aa17.06■□□□□ 0.32
Col6a2-202ENSMUST00000105413 Thoc2B1AZI6 1594 aaKnown RBP17.06■□□□□ 0.32
Col6a2-202ENSMUST00000105413 Ncoa3O09000 1398 aa17.06■□□□□ 0.32
Col6a2-202ENSMUST00000105413 Neo1P97798 1493 aa17.05■□□□□ 0.32
Col6a2-202ENSMUST00000105413 Ccdc146E9Q9F7 977 aa17.05■□□□□ 0.32
Col6a2-202ENSMUST00000105413 Gsto1O09131 240 aa17.04■□□□□ 0.32
Col6a2-202ENSMUST00000105413 AampJ3QN89 436 aa17.04■□□□□ 0.32
Col6a2-202ENSMUST00000105413 Pik3c2gO70167 1506 aa17.04■□□□□ 0.32
Col6a2-202ENSMUST00000105413 Mlh3A0A1Y7VMP7 1443 aa17.04■□□□□ 0.32
Col6a2-202ENSMUST00000105413 Asxl1P59598 1514 aa17.03■□□□□ 0.32
Col6a2-202ENSMUST00000105413 BC005561E9Q5E2 1589 aa17.03■□□□□ 0.32
Col6a2-202ENSMUST00000105413 Rtn4Q99P72 1162 aaKnown RBP17.03■□□□□ 0.32
Col6a2-202ENSMUST00000105413 Polr3aB2RXC6 1390 aa17.02■□□□□ 0.32
Col6a2-202ENSMUST00000105413 Apaf1O88879 1249 aa17.02■□□□□ 0.32
Col6a2-202ENSMUST00000105413 KarsQ99MN1 595 aaKnown RBP17.02■□□□□ 0.32
Col6a2-202ENSMUST00000105413 Atp2b2Q9R0K7 1198 aa17.01■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Ciz1Q8VEH2 845 aa17.01■□□□□ 0.31
Col6a2-202ENSMUST00000105413 PtmsQ9D0J8 101 aaKnown RBP17.01■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Q9D9H8 365 aa17.01■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Eif4g2Q62448 906 aaKnown RBP17■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Gtf3c3Q3TMP1 882 aa17■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Camsap2Q8C1B1 1461 aa17■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Ccdc183A2AJB1 534 aa17■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Atl3Q91YH5 541 aa16.99■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Cgnl1Q6AW69 1298 aa16.99■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Caskin1Q6P9K8 1431 aa16.99■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Cabp4Q8VHC5 271 aa16.98■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Samd9lQ69Z37 1561 aa16.98■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Rbm25B2RY56 838 aaKnown RBP16.98■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Erich6bQ9D4S6 220 aa16.98■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Swt1Q9DBQ9 907 aa16.97■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Sall3Q62255 1320 aa16.97■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Pes1Q9EQ61 584 aaKnown RBP16.97■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Nectin2P32507 530 aa16.96■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Ggt6Q6PDE7 497 aa16.96■□□□□ 0.31
Col6a2-202ENSMUST00000105413 Pla2r1Q62028 1487 aa16.95■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Eif4g1Q6NZJ6 1600 aaKnown RBP16.95■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Ap3b2Q9JME5 1082 aa16.95■□□□□ 0.3
Col6a2-202ENSMUST00000105413 DroshaQ5HZJ0 1373 aaKnown RBP16.94■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Nutm1Q8BHP2 1126 aa16.94■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Rabep1O35551 862 aa16.94■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Usp16Q99LG0 825 aa16.94■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Rsph3aQ3UFY4 516 aa16.93■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Gnai1B2RSH2 354 aa16.93■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Gnai3Q9DC51 354 aa16.93■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Rfx1P48377 963 aa16.93■□□□□ 0.3
Col6a2-202ENSMUST00000105413 PxdnQ3UQ28 1475 aa16.93■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Erich3F6QRE9 1637 aa16.93■□□□□ 0.3
Col6a2-202ENSMUST00000105413 FanciQ8K368 1330 aa16.92■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Disp1Q3TDN0 1521 aa16.92■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Cavin4A2AMM0 362 aa16.92■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Cc2d1aQ8K1A6 943 aa16.92■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Triml2E9PW10 424 aa16.91■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Pde3bQ61409 1100 aa16.91■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Dnajc5bQ9CQ94 199 aa16.91■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Ttc21bQ0HA38 1315 aa16.91■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Sh3bp5Q9Z131 463 aa16.9■□□□□ 0.3
Col6a2-202ENSMUST00000105413 SlkO54988 1233 aa16.9■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Dusp27Q148W8 1138 aa16.9■□□□□ 0.3
Col6a2-202ENSMUST00000105413 Ric3Q8BPM6 367 aa16.89■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Pcmtd1P59913 357 aa16.89■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Ppp2r3aB2RXC8 1150 aa16.88■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Cald1E9QA15 768 aaKnown RBP16.88■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Fam135aQ6NS59 1506 aa16.88■□□□□ 0.29
Col6a2-202ENSMUST00000105413 PrkcshO08795 521 aa16.88■□□□□ 0.29
Col6a2-202ENSMUST00000105413 WizO88286 1684 aaKnown RBP16.88■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Brpf1B2RRD7 1212 aa16.87■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Rassf8Q8CJ96 419 aa16.87■□□□□ 0.29
Col6a2-202ENSMUST00000105413 MecomP14404 1042 aa16.87■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Igf1rQ60751 1373 aa16.87■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Gm21190A0A0G2JGJ6 266 aa16.86■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Ccdc171E9Q1U1 1324 aa16.85■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Slc4a10Q5DTL9 1118 aa16.85■□□□□ 0.29
Col6a2-202ENSMUST00000105413 SkilQ60665 675 aa16.85■□□□□ 0.29
Col6a2-202ENSMUST00000105413 4933402E13RikQ9D4D2 429 aa16.85■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Atp6v1dP57746 247 aa16.84■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Cetn4Q8K4K1 168 aa16.84■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Tspyl2Q7TQI8 677 aa16.84■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Peg3Q3URU2 1571 aa16.83■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Rapgef6Q5NCJ1 1609 aa16.83■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Smarce1O54941 411 aaKnown RBP16.83■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Atp7aQ64430 1491 aa16.83■□□□□ 0.29
Col6a2-202ENSMUST00000105413 Slc52a2Q9D8F3 450 aa16.83■□□□□ 0.28
Col6a2-202ENSMUST00000105413 Kank1E9Q238 1360 aa16.83■□□□□ 0.28
Col6a2-202ENSMUST00000105413 Casq1O09165 405 aa16.83■□□□□ 0.28
Col6a2-202ENSMUST00000105413 Lmtk2Q3TYD6 1471 aa16.83■□□□□ 0.28
Col6a2-202ENSMUST00000105413 Fancd2Q80V62 1450 aa16.83■□□□□ 0.28
Col6a2-202ENSMUST00000105413 Tnpo1Q8BFY9 898 aaKnown RBP16.82■□□□□ 0.28
Col6a2-202ENSMUST00000105413 Cdk19Q8BWD8 501 aa16.82■□□□□ 0.28
Col6a2-202ENSMUST00000105413 Iffo2Q8R2V2 512 aa16.82■□□□□ 0.28
Col6a2-202ENSMUST00000105413 Afap1Q80YS6 731 aa16.82■□□□□ 0.28
Col6a2-202ENSMUST00000105413 CgnP59242 1191 aa16.81■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 141.9 ms