RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Uggt1Q6P5E4 1551 aa32.22■■■□□ 2.75
Scn1b-201ENSMUST00000098548 Hdac5Q9Z2V6 1113 aa32.22■■■□□ 2.75
Scn1b-201ENSMUST00000098548 Aebp2Q9Z248 504 aaKnown RBP32.2■■■□□ 2.75
Scn1b-201ENSMUST00000098548 Sall2Q9QX96 1004 aa32.19■■■□□ 2.74
Scn1b-201ENSMUST00000098548 Mroh1E0CZ22 1640 aa32.18■■■□□ 2.74
Scn1b-201ENSMUST00000098548 Naip7Q9JIB3 1402 aa32.17■■■□□ 2.74
Scn1b-201ENSMUST00000098548 Mroh3A0A1D5RM54 893 aa32.17■■■□□ 2.74
Scn1b-201ENSMUST00000098548 Prrc2bQ7TPM1 1486 aaKnown RBP32.13■■■□□ 2.73
Scn1b-201ENSMUST00000098548 Kdm5aQ3UXZ9 1690 aa32.12■■■□□ 2.73
Scn1b-201ENSMUST00000098548 GphnQ8BUV3 769 aaKnown RBP32.08■■■□□ 2.73
Scn1b-201ENSMUST00000098548 Adamts13Q769J6 1426 aa32.08■■■□□ 2.73
Scn1b-201ENSMUST00000098548 Cyb5rlB1AS42 316 aa32.07■■■□□ 2.72
Scn1b-201ENSMUST00000098548 Neurod1Q60867 357 aa32.07■■■□□ 2.72
Scn1b-201ENSMUST00000098548 Tulp4Q9JIL5 1547 aa32.05■■■□□ 2.72
Scn1b-201ENSMUST00000098548 AU022751B1B0V2 589 aa32.04■■■□□ 2.72
Scn1b-201ENSMUST00000098548 Txndc2Q6P902 515 aa32.02■■■□□ 2.72
Scn1b-201ENSMUST00000098548 P3h3Q8CG70 732 aa32.02■■■□□ 2.72
Scn1b-201ENSMUST00000098548 Grwd1Q810D6 446 aaKnown RBP32.02■■■□□ 2.72
Scn1b-201ENSMUST00000098548 Scn4aQ9ER60 1841 aa31.99■■■□□ 2.71
Scn1b-201ENSMUST00000098548 Ifit1bl1D3Z6F0 470 aa31.99■■■□□ 2.71
Scn1b-201ENSMUST00000098548 Myom1Q62234 1667 aaKnown RBP31.97■■■□□ 2.71
Scn1b-201ENSMUST00000098548 Dip2aQ8BWT5 1523 aa31.97■■■□□ 2.71
Scn1b-201ENSMUST00000098548 Iqgap1Q9JKF1 1657 aaKnown RBP31.96■■■□□ 2.71
Scn1b-201ENSMUST00000098548 Arid4bA2CG63 1314 aaKnown RBP31.96■■■□□ 2.71
Scn1b-201ENSMUST00000098548 Rimbp3Q3V0F0 1606 aa31.95■■■□□ 2.71
Scn1b-201ENSMUST00000098548 Plxnc1Q9QZC2 1574 aa31.94■■■□□ 2.7
Scn1b-201ENSMUST00000098548 Zc3h13E9Q784 1729 aaKnown RBP31.94■■■□□ 2.7
Scn1b-201ENSMUST00000098548 Ppargc1bQ8VHJ7 1014 aa31.94■■■□□ 2.7
Scn1b-201ENSMUST00000098548 Scaf11E9PZM7 1456 aaKnown RBP31.93■■■□□ 2.7
Scn1b-201ENSMUST00000098548 Rims1Q99NE5 1463 aa31.93■■■□□ 2.7
Scn1b-201ENSMUST00000098548 PplQ9R269 1755 aa31.93■■■□□ 2.7
Scn1b-201ENSMUST00000098548 Psme1P97371 249 aa31.93■■■□□ 2.7
Scn1b-201ENSMUST00000098548 Gemin5Q8BX17 1502 aaKnown RBP31.93■■■□□ 2.7
Scn1b-201ENSMUST00000098548 Atp1b4Q99ME6 356 aa31.89■■■□□ 2.7
Scn1b-201ENSMUST00000098548 Eif2ak4Q9QZ05 1648 aa31.87■■■□□ 2.69
Scn1b-201ENSMUST00000098548 IghaA0A0A6YXW6 389 aa31.87■■■□□ 2.69
Scn1b-201ENSMUST00000098548 Kdm2aP59997 1161 aa31.87■■■□□ 2.69
Scn1b-201ENSMUST00000098548 Mbd5B1AYB6 1498 aa31.87■■■□□ 2.69
Scn1b-201ENSMUST00000098548 Cdk13Q69ZA1 1511 aaKnown RBP31.86■■■□□ 2.69
Scn1b-201ENSMUST00000098548 Gm13695A2AK44 830 aa31.86■■■□□ 2.69
Scn1b-201ENSMUST00000098548 Myo3aQ8K3H5 1613 aa31.86■■■□□ 2.69
Scn1b-201ENSMUST00000098548 Phlpp1Q8CHE4 1687 aa31.85■■■□□ 2.69
Scn1b-201ENSMUST00000098548 Polr3aB2RXC6 1390 aa31.84■■■□□ 2.69
Scn1b-201ENSMUST00000098548 Asxl2Q8BZ32 1370 aa31.84■■■□□ 2.69
Scn1b-201ENSMUST00000098548 Arhgef28P97433 1693 aa31.84■■■□□ 2.69
Scn1b-201ENSMUST00000098548 Mug2P28666 1451 aa31.84■■■□□ 2.69
Scn1b-201ENSMUST00000098548 Rims2Q9EQZ7 1530 aa31.82■■■□□ 2.69
Scn1b-201ENSMUST00000098548 Cep152A2AUM9 1736 aaKnown RBP31.82■■■□□ 2.68
Scn1b-201ENSMUST00000098548 Shq1Q7TMX5 569 aa31.81■■■□□ 2.68
Scn1b-201ENSMUST00000098548 Cpsf1Q9EPU4 1441 aaKnown RBP31.8■■■□□ 2.68
Scn1b-201ENSMUST00000098548 Os9Q8K2C7 672 aa31.79■■■□□ 2.68
Scn1b-201ENSMUST00000098548 Q9D9H8 365 aa31.78■■■□□ 2.68
Scn1b-201ENSMUST00000098548 Ncoa1P70365 1447 aa31.78■■■□□ 2.68
Scn1b-201ENSMUST00000098548 Pip4k2bQ80XI4 416 aa31.77■■■□□ 2.68
Scn1b-201ENSMUST00000098548 Setd1aE9PYH6 1716 aa31.77■■■□□ 2.68
Scn1b-201ENSMUST00000098548 Srpk2O54781 681 aaKnown RBP31.76■■■□□ 2.67
Scn1b-201ENSMUST00000098548 Fan1Q69ZT1 1020 aa31.76■■■□□ 2.67
Scn1b-201ENSMUST00000098548 Cdk5rap2Q8K389 1822 aa31.73■■■□□ 2.67
Scn1b-201ENSMUST00000098548 Gm20521D3Z5F7 333 aa31.73■■■□□ 2.67
Scn1b-201ENSMUST00000098548 Ltbp4Q8K4G1 1666 aa31.73■■■□□ 2.67
Scn1b-201ENSMUST00000098548 PalldQ9ET54 1408 aa31.72■■■□□ 2.67
Scn1b-201ENSMUST00000098548 Slit3Q9WVB4 1523 aa31.72■■■□□ 2.67
Scn1b-201ENSMUST00000098548 Dapk1Q80YE7 1442 aa31.68■■■□□ 2.66
Scn1b-201ENSMUST00000098548 Slc52a2Q9D8F3 450 aa31.68■■■□□ 2.66
Scn1b-201ENSMUST00000098548 Puf60Q3UEB3 564 aaKnown RBP31.67■■■□□ 2.66
Scn1b-201ENSMUST00000098548 Lmtk3Q5XJV6 1424 aa31.64■■■□□ 2.66
Scn1b-201ENSMUST00000098548 Rundc1Q0VDN7 615 aa31.64■■■□□ 2.65
Scn1b-201ENSMUST00000098548 PzpQ61838 1495 aa31.62■■■□□ 2.65
Scn1b-201ENSMUST00000098548 Lrrc7Q80TE7 1490 aa31.62■■■□□ 2.65
Scn1b-201ENSMUST00000098548 MaddQ80U28 1577 aa31.61■■■□□ 2.65
Scn1b-201ENSMUST00000098548 Stk26Q99JT2 416 aa31.6■■■□□ 2.65
Scn1b-201ENSMUST00000098548 Nrxn3Q6P9K9 1571 aa31.59■■■□□ 2.65
Scn1b-201ENSMUST00000098548 Med1Q925J9 1575 aa31.58■■■□□ 2.65
Scn1b-201ENSMUST00000098548 Sipa1l1Q8C0T5 1782 aa31.57■■■□□ 2.65
Scn1b-201ENSMUST00000098548 RalgapbQ8BQZ4 1484 aa31.57■■■□□ 2.64
Scn1b-201ENSMUST00000098548 Card11Q8CIS0 1159 aa31.56■■■□□ 2.64
Scn1b-201ENSMUST00000098548 Rapgef3Q8VCC8 918 aa31.55■■■□□ 2.64
Scn1b-201ENSMUST00000098548 Zbtb4Q5F293 982 aa31.53■■■□□ 2.64
Scn1b-201ENSMUST00000098548 Usp40Q8BWR4 1235 aa31.52■■■□□ 2.64
Scn1b-201ENSMUST00000098548 Cwc22Q8C5N3 908 aaKnown RBP31.51■■■□□ 2.63
Scn1b-201ENSMUST00000098548 Utp14aQ640M1 767 aaKnown RBP31.5■■■□□ 2.63
Scn1b-201ENSMUST00000098548 Cep170bQ80U49 1574 aa31.5■■■□□ 2.63
Scn1b-201ENSMUST00000098548 Thsd7aQ69ZU6 1645 aa31.49■■■□□ 2.63
Scn1b-201ENSMUST00000098548 Tubgcp6G5E8P0 1769 aa31.49■■■□□ 2.63
Scn1b-201ENSMUST00000098548 Pik3r4Q8VD65 1358 aa31.47■■■□□ 2.63
Scn1b-201ENSMUST00000098548 HnrnpmQ9D0E1 729 aaKnown RBP31.47■■■□□ 2.63
Scn1b-201ENSMUST00000098548 Arap3Q8R5G7 1538 aa31.45■■■□□ 2.63
Scn1b-201ENSMUST00000098548 DnmbpQ6TXD4 1580 aa31.44■■■□□ 2.62
Scn1b-201ENSMUST00000098548 Nphp4P59240 1425 aa31.44■■■□□ 2.62
Scn1b-201ENSMUST00000098548 Nop58Q6DFW4 536 aaKnown RBP31.43■■■□□ 2.62
Scn1b-201ENSMUST00000098548 Ift172Q6VH22 1749 aa31.43■■■□□ 2.62
Scn1b-201ENSMUST00000098548 Stag3O70576 1240 aa31.42■■■□□ 2.62
Scn1b-201ENSMUST00000098548 Gtf2e1Q9D0D5 440 aa31.42■■■□□ 2.62
Scn1b-201ENSMUST00000098548 Sin3aQ60520 1274 aaKnown RBP31.41■■■□□ 2.62
Scn1b-201ENSMUST00000098548 Cps1Q8C196 1500 aa31.4■■■□□ 2.62
Scn1b-201ENSMUST00000098548 IqubQ8CDK3 788 aa31.4■■■□□ 2.62
Scn1b-201ENSMUST00000098548 Srcin1Q9QWI6 1250 aa31.39■■■□□ 2.62
Scn1b-201ENSMUST00000098548 Gli3Q61602 1583 aa31.37■■■□□ 2.61
Scn1b-201ENSMUST00000098548 Rock2P70336 1388 aa31.36■■■□□ 2.61
Scn1b-201ENSMUST00000098548 Plekhg1F6S200 1446 aa31.33■■■□□ 2.61
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms