RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Uggt1Q6P5E4 1551 aa32,22■■■□□ 2,75
Scn1b-201ENSMUST00000098548 Hdac5Q9Z2V6 1113 aa32,22■■■□□ 2,75
Scn1b-201ENSMUST00000098548 Aebp2Q9Z248 504 aaKnown RBP32,2■■■□□ 2,75
Scn1b-201ENSMUST00000098548 Sall2Q9QX96 1004 aa32,19■■■□□ 2,74
Scn1b-201ENSMUST00000098548 Mroh1E0CZ22 1640 aa32,18■■■□□ 2,74
Scn1b-201ENSMUST00000098548 Naip7Q9JIB3 1402 aa32,17■■■□□ 2,74
Scn1b-201ENSMUST00000098548 Mroh3A0A1D5RM54 893 aa32,17■■■□□ 2,74
Scn1b-201ENSMUST00000098548 Prrc2bQ7TPM1 1486 aaKnown RBP32,13■■■□□ 2,73
Scn1b-201ENSMUST00000098548 Kdm5aQ3UXZ9 1690 aa32,12■■■□□ 2,73
Scn1b-201ENSMUST00000098548 GphnQ8BUV3 769 aaKnown RBP32,08■■■□□ 2,73
Scn1b-201ENSMUST00000098548 Adamts13Q769J6 1426 aa32,08■■■□□ 2,73
Scn1b-201ENSMUST00000098548 Cyb5rlB1AS42 316 aa32,07■■■□□ 2,72
Scn1b-201ENSMUST00000098548 Neurod1Q60867 357 aa32,07■■■□□ 2,72
Scn1b-201ENSMUST00000098548 Tulp4Q9JIL5 1547 aa32,05■■■□□ 2,72
Scn1b-201ENSMUST00000098548 AU022751B1B0V2 589 aa32,04■■■□□ 2,72
Scn1b-201ENSMUST00000098548 Txndc2Q6P902 515 aa32,02■■■□□ 2,72
Scn1b-201ENSMUST00000098548 P3h3Q8CG70 732 aa32,02■■■□□ 2,72
Scn1b-201ENSMUST00000098548 Grwd1Q810D6 446 aaKnown RBP32,02■■■□□ 2,72
Scn1b-201ENSMUST00000098548 Scn4aQ9ER60 1841 aa31,99■■■□□ 2,71
Scn1b-201ENSMUST00000098548 Ifit1bl1D3Z6F0 470 aa31,99■■■□□ 2,71
Scn1b-201ENSMUST00000098548 Myom1Q62234 1667 aaKnown RBP31,97■■■□□ 2,71
Scn1b-201ENSMUST00000098548 Dip2aQ8BWT5 1523 aa31,97■■■□□ 2,71
Scn1b-201ENSMUST00000098548 Iqgap1Q9JKF1 1657 aaKnown RBP31,96■■■□□ 2,71
Scn1b-201ENSMUST00000098548 Arid4bA2CG63 1314 aaKnown RBP31,96■■■□□ 2,71
Scn1b-201ENSMUST00000098548 Rimbp3Q3V0F0 1606 aa31,95■■■□□ 2,71
Scn1b-201ENSMUST00000098548 Plxnc1Q9QZC2 1574 aa31,94■■■□□ 2,7
Scn1b-201ENSMUST00000098548 Zc3h13E9Q784 1729 aaKnown RBP31,94■■■□□ 2,7
Scn1b-201ENSMUST00000098548 Ppargc1bQ8VHJ7 1014 aa31,94■■■□□ 2,7
Scn1b-201ENSMUST00000098548 Scaf11E9PZM7 1456 aaKnown RBP31,93■■■□□ 2,7
Scn1b-201ENSMUST00000098548 Rims1Q99NE5 1463 aa31,93■■■□□ 2,7
Scn1b-201ENSMUST00000098548 PplQ9R269 1755 aa31,93■■■□□ 2,7
Scn1b-201ENSMUST00000098548 Psme1P97371 249 aa31,93■■■□□ 2,7
Scn1b-201ENSMUST00000098548 Gemin5Q8BX17 1502 aaKnown RBP31,93■■■□□ 2,7
Scn1b-201ENSMUST00000098548 Atp1b4Q99ME6 356 aa31,89■■■□□ 2,7
Scn1b-201ENSMUST00000098548 Eif2ak4Q9QZ05 1648 aa31,87■■■□□ 2,69
Scn1b-201ENSMUST00000098548 IghaA0A0A6YXW6 389 aa31,87■■■□□ 2,69
Scn1b-201ENSMUST00000098548 Kdm2aP59997 1161 aa31,87■■■□□ 2,69
Scn1b-201ENSMUST00000098548 Mbd5B1AYB6 1498 aa31,87■■■□□ 2,69
Scn1b-201ENSMUST00000098548 Cdk13Q69ZA1 1511 aaKnown RBP31,86■■■□□ 2,69
Scn1b-201ENSMUST00000098548 Gm13695A2AK44 830 aa31,86■■■□□ 2,69
Scn1b-201ENSMUST00000098548 Myo3aQ8K3H5 1613 aa31,86■■■□□ 2,69
Scn1b-201ENSMUST00000098548 Phlpp1Q8CHE4 1687 aa31,85■■■□□ 2,69
Scn1b-201ENSMUST00000098548 Polr3aB2RXC6 1390 aa31,84■■■□□ 2,69
Scn1b-201ENSMUST00000098548 Asxl2Q8BZ32 1370 aa31,84■■■□□ 2,69
Scn1b-201ENSMUST00000098548 Arhgef28P97433 1693 aa31,84■■■□□ 2,69
Scn1b-201ENSMUST00000098548 Mug2P28666 1451 aa31,84■■■□□ 2,69
Scn1b-201ENSMUST00000098548 Rims2Q9EQZ7 1530 aa31,82■■■□□ 2,69
Scn1b-201ENSMUST00000098548 Cep152A2AUM9 1736 aaKnown RBP31,82■■■□□ 2,68
Scn1b-201ENSMUST00000098548 Shq1Q7TMX5 569 aa31,81■■■□□ 2,68
Scn1b-201ENSMUST00000098548 Cpsf1Q9EPU4 1441 aaKnown RBP31,8■■■□□ 2,68
Scn1b-201ENSMUST00000098548 Os9Q8K2C7 672 aa31,79■■■□□ 2,68
Scn1b-201ENSMUST00000098548 Q9D9H8 365 aa31,78■■■□□ 2,68
Scn1b-201ENSMUST00000098548 Ncoa1P70365 1447 aa31,78■■■□□ 2,68
Scn1b-201ENSMUST00000098548 Pip4k2bQ80XI4 416 aa31,77■■■□□ 2,68
Scn1b-201ENSMUST00000098548 Setd1aE9PYH6 1716 aa31,77■■■□□ 2,68
Scn1b-201ENSMUST00000098548 Srpk2O54781 681 aaKnown RBP31,76■■■□□ 2,67
Scn1b-201ENSMUST00000098548 Fan1Q69ZT1 1020 aa31,76■■■□□ 2,67
Scn1b-201ENSMUST00000098548 Cdk5rap2Q8K389 1822 aa31,73■■■□□ 2,67
Scn1b-201ENSMUST00000098548 Gm20521D3Z5F7 333 aa31,73■■■□□ 2,67
Scn1b-201ENSMUST00000098548 Ltbp4Q8K4G1 1666 aa31,73■■■□□ 2,67
Scn1b-201ENSMUST00000098548 PalldQ9ET54 1408 aa31,72■■■□□ 2,67
Scn1b-201ENSMUST00000098548 Slit3Q9WVB4 1523 aa31,72■■■□□ 2,67
Scn1b-201ENSMUST00000098548 Dapk1Q80YE7 1442 aa31,68■■■□□ 2,66
Scn1b-201ENSMUST00000098548 Slc52a2Q9D8F3 450 aa31,68■■■□□ 2,66
Scn1b-201ENSMUST00000098548 Puf60Q3UEB3 564 aaKnown RBP31,67■■■□□ 2,66
Scn1b-201ENSMUST00000098548 Lmtk3Q5XJV6 1424 aa31,64■■■□□ 2,66
Scn1b-201ENSMUST00000098548 Rundc1Q0VDN7 615 aa31,64■■■□□ 2,65
Scn1b-201ENSMUST00000098548 PzpQ61838 1495 aa31,62■■■□□ 2,65
Scn1b-201ENSMUST00000098548 Lrrc7Q80TE7 1490 aa31,62■■■□□ 2,65
Scn1b-201ENSMUST00000098548 MaddQ80U28 1577 aa31,61■■■□□ 2,65
Scn1b-201ENSMUST00000098548 Stk26Q99JT2 416 aa31,6■■■□□ 2,65
Scn1b-201ENSMUST00000098548 Nrxn3Q6P9K9 1571 aa31,59■■■□□ 2,65
Scn1b-201ENSMUST00000098548 Med1Q925J9 1575 aa31,58■■■□□ 2,65
Scn1b-201ENSMUST00000098548 Sipa1l1Q8C0T5 1782 aa31,57■■■□□ 2,65
Scn1b-201ENSMUST00000098548 RalgapbQ8BQZ4 1484 aa31,57■■■□□ 2,64
Scn1b-201ENSMUST00000098548 Card11Q8CIS0 1159 aa31,56■■■□□ 2,64
Scn1b-201ENSMUST00000098548 Rapgef3Q8VCC8 918 aa31,55■■■□□ 2,64
Scn1b-201ENSMUST00000098548 Zbtb4Q5F293 982 aa31,53■■■□□ 2,64
Scn1b-201ENSMUST00000098548 Usp40Q8BWR4 1235 aa31,52■■■□□ 2,64
Scn1b-201ENSMUST00000098548 Cwc22Q8C5N3 908 aaKnown RBP31,51■■■□□ 2,63
Scn1b-201ENSMUST00000098548 Utp14aQ640M1 767 aaKnown RBP31,5■■■□□ 2,63
Scn1b-201ENSMUST00000098548 Cep170bQ80U49 1574 aa31,5■■■□□ 2,63
Scn1b-201ENSMUST00000098548 Thsd7aQ69ZU6 1645 aa31,49■■■□□ 2,63
Scn1b-201ENSMUST00000098548 Tubgcp6G5E8P0 1769 aa31,49■■■□□ 2,63
Scn1b-201ENSMUST00000098548 Pik3r4Q8VD65 1358 aa31,47■■■□□ 2,63
Scn1b-201ENSMUST00000098548 HnrnpmQ9D0E1 729 aaKnown RBP31,47■■■□□ 2,63
Scn1b-201ENSMUST00000098548 Arap3Q8R5G7 1538 aa31,45■■■□□ 2,63
Scn1b-201ENSMUST00000098548 DnmbpQ6TXD4 1580 aa31,44■■■□□ 2,62
Scn1b-201ENSMUST00000098548 Nphp4P59240 1425 aa31,44■■■□□ 2,62
Scn1b-201ENSMUST00000098548 Nop58Q6DFW4 536 aaKnown RBP31,43■■■□□ 2,62
Scn1b-201ENSMUST00000098548 Ift172Q6VH22 1749 aa31,43■■■□□ 2,62
Scn1b-201ENSMUST00000098548 Stag3O70576 1240 aa31,42■■■□□ 2,62
Scn1b-201ENSMUST00000098548 Gtf2e1Q9D0D5 440 aa31,42■■■□□ 2,62
Scn1b-201ENSMUST00000098548 Sin3aQ60520 1274 aaKnown RBP31,41■■■□□ 2,62
Scn1b-201ENSMUST00000098548 Cps1Q8C196 1500 aa31,4■■■□□ 2,62
Scn1b-201ENSMUST00000098548 IqubQ8CDK3 788 aa31,4■■■□□ 2,62
Scn1b-201ENSMUST00000098548 Srcin1Q9QWI6 1250 aa31,39■■■□□ 2,62
Scn1b-201ENSMUST00000098548 Gli3Q61602 1583 aa31,37■■■□□ 2,61
Scn1b-201ENSMUST00000098548 Rock2P70336 1388 aa31,36■■■□□ 2,61
Scn1b-201ENSMUST00000098548 Plekhg1F6S200 1446 aa31,33■■■□□ 2,61
Retrieved 100 of 22,080 RNA–protein pairs in 55,7 ms