RNA–Protein interactions for RNA: ENSMUST00000098036.8

Cln3-203, Transcript of Battenin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cln3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3-203ENSMUST00000098036 Iqgap1Q9JKF1 1657 aaKnown RBP19.11■□□□□ 0.65
Cln3-203ENSMUST00000098036 Kdm5aQ3UXZ9 1690 aa19.1■□□□□ 0.65
Cln3-203ENSMUST00000098036 Polr3aB2RXC6 1390 aa19.09■□□□□ 0.65
Cln3-203ENSMUST00000098036 Rimbp3Q3V0F0 1606 aa19.09■□□□□ 0.65
Cln3-203ENSMUST00000098036 Washc2Q6PGL7 1334 aa19.08■□□□□ 0.65
Cln3-203ENSMUST00000098036 Mug2P28666 1451 aa19.08■□□□□ 0.64
Cln3-203ENSMUST00000098036 Itsn1Q9Z0R4 1714 aa19.08■□□□□ 0.64
Cln3-203ENSMUST00000098036 Efcab6Q6P1E8 1516 aa19.07■□□□□ 0.64
Cln3-203ENSMUST00000098036 Tecpr2Q3UH45 1423 aa19.07■□□□□ 0.64
Cln3-203ENSMUST00000098036 Phlpp1Q8CHE4 1687 aa19.07■□□□□ 0.64
Cln3-203ENSMUST00000098036 Neurod1Q60867 357 aa19.06■□□□□ 0.64
Cln3-203ENSMUST00000098036 Stk24Q99KH8 431 aa19.06■□□□□ 0.64
Cln3-203ENSMUST00000098036 Uggt1Q6P5E4 1551 aa19.04■□□□□ 0.64
Cln3-203ENSMUST00000098036 Dapk1Q80YE7 1442 aa19.03■□□□□ 0.64
Cln3-203ENSMUST00000098036 Pip4k2bQ80XI4 416 aa19.03■□□□□ 0.64
Cln3-203ENSMUST00000098036 ErbinQ80TH2 1402 aa19.03■□□□□ 0.64
Cln3-203ENSMUST00000098036 Abca8aQ8K442 1620 aa19.02■□□□□ 0.64
Cln3-203ENSMUST00000098036 Ehbp1l1Q99MS7 1716 aa19.02■□□□□ 0.64
Cln3-203ENSMUST00000098036 Scaf11E9PZM7 1456 aaKnown RBP19.02■□□□□ 0.64
Cln3-203ENSMUST00000098036 Ncoa1P70365 1447 aa19.01■□□□□ 0.63
Cln3-203ENSMUST00000098036 Arid4bA2CG63 1314 aaKnown RBP19.01■□□□□ 0.63
Cln3-203ENSMUST00000098036 Naip7Q9JIB3 1402 aa19.01■□□□□ 0.63
Cln3-203ENSMUST00000098036 RalgapbQ8BQZ4 1484 aa19.01■□□□□ 0.63
Cln3-203ENSMUST00000098036 Rims2Q9EQZ7 1530 aa19.01■□□□□ 0.63
Cln3-203ENSMUST00000098036 Adamts13Q769J6 1426 aa18.99■□□□□ 0.63
Cln3-203ENSMUST00000098036 Sall3Q62255 1320 aa18.98■□□□□ 0.63
Cln3-203ENSMUST00000098036 Mroh3A0A1D5RM54 893 aa18.98■□□□□ 0.63
Cln3-203ENSMUST00000098036 Txndc2Q6P902 515 aa18.98■□□□□ 0.63
Cln3-203ENSMUST00000098036 Cwc22Q8C5N3 908 aaKnown RBP18.98■□□□□ 0.63
Cln3-203ENSMUST00000098036 Ltbp4Q8K4G1 1666 aa18.98■□□□□ 0.63
Cln3-203ENSMUST00000098036 Cdk13Q69ZA1 1511 aaKnown RBP18.97■□□□□ 0.63
Cln3-203ENSMUST00000098036 Tulp4Q9JIL5 1547 aa18.97■□□□□ 0.63
Cln3-203ENSMUST00000098036 Mroh1E0CZ22 1640 aa18.96■□□□□ 0.63
Cln3-203ENSMUST00000098036 Rundc1Q0VDN7 615 aa18.95■□□□□ 0.62
Cln3-203ENSMUST00000098036 Grwd1Q810D6 446 aaKnown RBP18.95■□□□□ 0.62
Cln3-203ENSMUST00000098036 P3h3Q8CG70 732 aa18.95■□□□□ 0.62
Cln3-203ENSMUST00000098036 Prrc2bQ7TPM1 1486 aaKnown RBP18.94■□□□□ 0.62
Cln3-203ENSMUST00000098036 Zc3h13E9Q784 1729 aaKnown RBP18.93■□□□□ 0.62
Cln3-203ENSMUST00000098036 Gemin5Q8BX17 1502 aaKnown RBP18.93■□□□□ 0.62
Cln3-203ENSMUST00000098036 Card11Q8CIS0 1159 aa18.93■□□□□ 0.62
Cln3-203ENSMUST00000098036 PplQ9R269 1755 aa18.92■□□□□ 0.62
Cln3-203ENSMUST00000098036 Gm13695A2AK44 830 aa18.92■□□□□ 0.62
Cln3-203ENSMUST00000098036 Sin3aQ60520 1274 aaKnown RBP18.92■□□□□ 0.62
Cln3-203ENSMUST00000098036 AatkQ80YE4 1365 aa18.92■□□□□ 0.62
Cln3-203ENSMUST00000098036 Eif2ak4Q9QZ05 1648 aa18.91■□□□□ 0.62
Cln3-203ENSMUST00000098036 Ifit1bl1D3Z6F0 470 aa18.9■□□□□ 0.62
Cln3-203ENSMUST00000098036 Psme1P97371 249 aa18.9■□□□□ 0.62
Cln3-203ENSMUST00000098036 Rock2P70336 1388 aa18.9■□□□□ 0.62
Cln3-203ENSMUST00000098036 Myo3aQ8K3H5 1613 aa18.9■□□□□ 0.62
Cln3-203ENSMUST00000098036 Cep152A2AUM9 1736 aaKnown RBP18.88■□□□□ 0.61
Cln3-203ENSMUST00000098036 Rims1Q99NE5 1463 aa18.87■□□□□ 0.61
Cln3-203ENSMUST00000098036 Rapgef3Q8VCC8 918 aa18.85■□□□□ 0.61
Cln3-203ENSMUST00000098036 Setd1aE9PYH6 1716 aa18.84■□□□□ 0.61
Cln3-203ENSMUST00000098036 Nrxn3Q6P9K9 1571 aa18.84■□□□□ 0.61
Cln3-203ENSMUST00000098036 Myom1Q62234 1667 aaKnown RBP18.83■□□□□ 0.61
Cln3-203ENSMUST00000098036 Atp1b4Q99ME6 356 aa18.83■□□□□ 0.6
Cln3-203ENSMUST00000098036 Plxnc1Q9QZC2 1574 aa18.83■□□□□ 0.6
Cln3-203ENSMUST00000098036 Plekhg5Q66T02 1073 aa18.82■□□□□ 0.6
Cln3-203ENSMUST00000098036 Arhgef28P97433 1693 aa18.82■□□□□ 0.6
Cln3-203ENSMUST00000098036 Med1Q925J9 1575 aa18.81■□□□□ 0.6
Cln3-203ENSMUST00000098036 Lmtk3Q5XJV6 1424 aa18.8■□□□□ 0.6
Cln3-203ENSMUST00000098036 PalldQ9ET54 1408 aa18.8■□□□□ 0.6
Cln3-203ENSMUST00000098036 Gli3Q61602 1583 aa18.8■□□□□ 0.6
Cln3-203ENSMUST00000098036 AU022751B1B0V2 589 aa18.79■□□□□ 0.6
Cln3-203ENSMUST00000098036 Tubgcp6G5E8P0 1769 aa18.79■□□□□ 0.6
Cln3-203ENSMUST00000098036 IghaA0A0A6YXW6 389 aa18.77■□□□□ 0.6
Cln3-203ENSMUST00000098036 Stard8Q8K031 1019 aa18.77■□□□□ 0.6
Cln3-203ENSMUST00000098036 Slit3Q9WVB4 1523 aa18.77■□□□□ 0.6
Cln3-203ENSMUST00000098036 Asxl2Q8BZ32 1370 aa18.77■□□□□ 0.59
Cln3-203ENSMUST00000098036 PzpQ61838 1495 aa18.73■□□□□ 0.59
Cln3-203ENSMUST00000098036 Shq1Q7TMX5 569 aa18.73■□□□□ 0.59
Cln3-203ENSMUST00000098036 Q9D9H8 365 aa18.73■□□□□ 0.59
Cln3-203ENSMUST00000098036 Thsd7aQ69ZU6 1645 aa18.73■□□□□ 0.59
Cln3-203ENSMUST00000098036 Cdk5rap2Q8K389 1822 aa18.73■□□□□ 0.59
Cln3-203ENSMUST00000098036 Srpk2O54781 681 aaKnown RBP18.72■□□□□ 0.59
Cln3-203ENSMUST00000098036 Pola1P33609 1465 aa18.72■□□□□ 0.59
Cln3-203ENSMUST00000098036 Kdm2aP59997 1161 aa18.72■□□□□ 0.59
Cln3-203ENSMUST00000098036 Smg6P61406 1418 aaKnown RBP18.71■□□□□ 0.59
Cln3-203ENSMUST00000098036 Gm20521D3Z5F7 333 aa18.71■□□□□ 0.59
Cln3-203ENSMUST00000098036 Nop58Q6DFW4 536 aaKnown RBP18.71■□□□□ 0.59
Cln3-203ENSMUST00000098036 Slc52a2Q9D8F3 450 aa18.7■□□□□ 0.58
Cln3-203ENSMUST00000098036 Mapk8ip2Q9ERE9 830 aa18.7■□□□□ 0.58
Cln3-203ENSMUST00000098036 Srcin1Q9QWI6 1250 aa18.69■□□□□ 0.58
Cln3-203ENSMUST00000098036 DnmbpQ6TXD4 1580 aa18.69■□□□□ 0.58
Cln3-203ENSMUST00000098036 Nphp4P59240 1425 aa18.69■□□□□ 0.58
Cln3-203ENSMUST00000098036 Sipa1l1Q8C0T5 1782 aa18.68■□□□□ 0.58
Cln3-203ENSMUST00000098036 Os9Q8K2C7 672 aa18.68■□□□□ 0.58
Cln3-203ENSMUST00000098036 Itsn2Q9Z0R6 1659 aa18.65■□□□□ 0.58
Cln3-203ENSMUST00000098036 MaddQ80U28 1577 aa18.65■□□□□ 0.58
Cln3-203ENSMUST00000098036 Fan1Q69ZT1 1020 aa18.64■□□□□ 0.58
Cln3-203ENSMUST00000098036 Sbno1Q689Z5 1390 aa18.63■□□□□ 0.57
Cln3-203ENSMUST00000098036 Pik3r4Q8VD65 1358 aa18.63■□□□□ 0.57
Cln3-203ENSMUST00000098036 Arap3Q8R5G7 1538 aa18.62■□□□□ 0.57
Cln3-203ENSMUST00000098036 Puf60Q3UEB3 564 aaKnown RBP18.62■□□□□ 0.57
Cln3-203ENSMUST00000098036 Usp40Q8BWR4 1235 aa18.61■□□□□ 0.57
Cln3-203ENSMUST00000098036 Gtf2e1Q9D0D5 440 aa18.61■□□□□ 0.57
Cln3-203ENSMUST00000098036 Tns3Q5SSZ5 1440 aa18.61■□□□□ 0.57
Cln3-203ENSMUST00000098036 Lrrc7Q80TE7 1490 aa18.59■□□□□ 0.57
Cln3-203ENSMUST00000098036 Col18a1P39061 1774 aa18.58■□□□□ 0.57
Cln3-203ENSMUST00000098036 Ift172Q6VH22 1749 aa18.58■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms