RNA–Protein interactions for RNA: ENSMUST00000098036.8

Cln3-203, Transcript of Battenin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cln3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3-203ENSMUST00000098036 Gm35339A0A140LHH9 1649 aa29.13■■■□□ 2.25
Cln3-203ENSMUST00000098036 NischQ80TM9 1593 aa28.81■■■□□ 2.2
Cln3-203ENSMUST00000098036 Abcc9P70170 1546 aa27.89■■■□□ 2.06
Cln3-203ENSMUST00000098036 Abcc8B2RUS7 1588 aa27.78■■■□□ 2.04
Cln3-203ENSMUST00000098036 ScribQ80U72 1612 aa26.73■■□□□ 1.87
Cln3-203ENSMUST00000098036 NacadQ5SWP3 1504 aa25.88■■□□□ 1.73
Cln3-203ENSMUST00000098036 Kdm5dQ62240 1548 aa25.88■■□□□ 1.73
Cln3-203ENSMUST00000098036 Dcaf1Q80TR8 1506 aa25.59■■□□□ 1.69
Cln3-203ENSMUST00000098036 Sycp2Q9CUU3 1500 aa25.36■■□□□ 1.65
Cln3-203ENSMUST00000098036 Rhox8Q6VSS7 320 aa25.19■■□□□ 1.62
Cln3-203ENSMUST00000098036 Rb1cc1Q9ESK9 1588 aa25.15■■□□□ 1.62
Cln3-203ENSMUST00000098036 BicraF8VPZ9 1578 aa24.99■■□□□ 1.59
Cln3-203ENSMUST00000098036 Ccdc180J3QNE4 1664 aa24.81■■□□□ 1.56
Cln3-203ENSMUST00000098036 Baz1aO88379 1555 aa24.78■■□□□ 1.56
Cln3-203ENSMUST00000098036 Crybg2B7ZCC2 1516 aa24.6■■□□□ 1.53
Cln3-203ENSMUST00000098036 Rtl1Q7M732 1744 aa24.57■■□□□ 1.52
Cln3-203ENSMUST00000098036 Zcchc6Q5BLK4 1491 aaKnown RBP24.41■■□□□ 1.5
Cln3-203ENSMUST00000098036 Pds5bQ4VA53 1446 aaKnown RBP24.24■■□□□ 1.47
Cln3-203ENSMUST00000098036 Smarca2Q6DIC0 1577 aa24.07■■□□□ 1.44
Cln3-203ENSMUST00000098036 Atad2bE9Q166 1460 aaKnown RBP24.04■■□□□ 1.44
Cln3-203ENSMUST00000098036 Dnajc5bQ9CQ94 199 aa24.03■■□□□ 1.44
Cln3-203ENSMUST00000098036 Thoc2B1AZI6 1594 aaKnown RBP24.01■■□□□ 1.43
Cln3-203ENSMUST00000098036 Smarca4Q3TKT4 1613 aaKnown RBP23.95■■□□□ 1.42
Cln3-203ENSMUST00000098036 Cecr2E9Q2Z1 1453 aa23.92■■□□□ 1.42
Cln3-203ENSMUST00000098036 Iqgap2Q3UQ44 1575 aa23.81■■□□□ 1.4
Cln3-203ENSMUST00000098036 Ercc6F8VPZ5 1481 aa23.79■■□□□ 1.4
Cln3-203ENSMUST00000098036 Cc2d2aQ8CFW7 1633 aa23.65■■□□□ 1.38
Cln3-203ENSMUST00000098036 Wdr62Q3U3T8 1523 aa23.56■■□□□ 1.36
Cln3-203ENSMUST00000098036 Frmpd1A2AKB4 1549 aa23.51■■□□□ 1.35
Cln3-203ENSMUST00000098036 Fam135aQ6NS59 1506 aa23.49■■□□□ 1.35
Cln3-203ENSMUST00000098036 Ccdc136Q3TVA9 1136 aa23.44■■□□□ 1.34
Cln3-203ENSMUST00000098036 Cttnbp2B9EJA2 1648 aa23.42■■□□□ 1.34
Cln3-203ENSMUST00000098036 Synj1Q8CHC4 1574 aa23.41■■□□□ 1.34
Cln3-203ENSMUST00000098036 CftrP26361 1476 aa23.39■■□□□ 1.34
Cln3-203ENSMUST00000098036 Brd4Q9ESU6 1400 aaKnown RBP23.39■■□□□ 1.33
Cln3-203ENSMUST00000098036 Phldb1Q6PDH0 1371 aaKnown RBP23.33■■□□□ 1.33
Cln3-203ENSMUST00000098036 Unc13aQ4KUS2 1712 aa23.29■■□□□ 1.32
Cln3-203ENSMUST00000098036 Trim41Q5NCC3 630 aa23.23■■□□□ 1.31
Cln3-203ENSMUST00000098036 Baz1bQ9Z277 1479 aa23.17■■□□□ 1.3
Cln3-203ENSMUST00000098036 Ubl4bQ9CQ84 188 aa23.12■■□□□ 1.29
Cln3-203ENSMUST00000098036 Esf1Q3V1V3 845 aaKnown RBP23.04■■□□□ 1.28
Cln3-203ENSMUST00000098036 Mrc2Q64449 1479 aa22.95■■□□□ 1.26
Cln3-203ENSMUST00000098036 HrcG5E8J6 738 aa22.81■■□□□ 1.24
Cln3-203ENSMUST00000098036 Rsf1E9PWW9 1441 aaKnown RBP22.79■■□□□ 1.24
Cln3-203ENSMUST00000098036 Kif15Q6P9L6 1387 aa22.74■■□□□ 1.23
Cln3-203ENSMUST00000098036 Golga3P55937 1487 aa22.7■■□□□ 1.22
Cln3-203ENSMUST00000098036 Lamc3Q9R0B6 1581 aa22.69■■□□□ 1.22
Cln3-203ENSMUST00000098036 Cux2P70298 1426 aa22.69■■□□□ 1.22
Cln3-203ENSMUST00000098036 Top2bQ64511 1612 aa22.62■■□□□ 1.21
Cln3-203ENSMUST00000098036 Cngb1E1AZ71 1325 aa22.58■■□□□ 1.21
Cln3-203ENSMUST00000098036 Kif21aQ9QXL2 1672 aa22.53■■□□□ 1.2
Cln3-203ENSMUST00000098036 TnnQ80Z71 1560 aa22.5■■□□□ 1.19
Cln3-203ENSMUST00000098036 Lrriq1Q0P5X1 1673 aa22.48■■□□□ 1.19
Cln3-203ENSMUST00000098036 Npm1Q61937 292 aaKnown RBP22.46■■□□□ 1.19
Cln3-203ENSMUST00000098036 Cep164Q5DU05 1446 aa22.4■■□□□ 1.18
Cln3-203ENSMUST00000098036 Ccdc18Q640L5 1455 aa22.36■■□□□ 1.17
Cln3-203ENSMUST00000098036 Fmn1Q05860 1466 aa22.35■■□□□ 1.17
Cln3-203ENSMUST00000098036 Il27Q8K3I6 234 aa22.33■■□□□ 1.17
Cln3-203ENSMUST00000098036 Camsap1A2AHC3 1581 aa22.33■■□□□ 1.16
Cln3-203ENSMUST00000098036 Ccdc88bQ4QRL3 1481 aa22.26■■□□□ 1.15
Cln3-203ENSMUST00000098036 Dhx29Q6PGC1 1365 aaKnown RBP22.21■■□□□ 1.15
Cln3-203ENSMUST00000098036 LrpprcQ6PB66 1392 aaKnown RBP22.2■■□□□ 1.14
Cln3-203ENSMUST00000098036 Chic1Q8CBW7 227 aa22.16■■□□□ 1.14
Cln3-203ENSMUST00000098036 Crocc2F6XLV1 1638 aa22.16■■□□□ 1.14
Cln3-203ENSMUST00000098036 Eif4g3Q80XI3 1579 aaKnown RBP22.15■■□□□ 1.14
Cln3-203ENSMUST00000098036 Urb2E9Q7L1 1524 aaKnown RBP22.15■■□□□ 1.14
Cln3-203ENSMUST00000098036 Plb1Q3TTY0 1478 aa22.11■■□□□ 1.13
Cln3-203ENSMUST00000098036 PogzQ8BZH4 1409 aaKnown RBP22.08■■□□□ 1.13
Cln3-203ENSMUST00000098036 Top2aQ01320 1528 aaKnown RBP22.04■■□□□ 1.12
Cln3-203ENSMUST00000098036 Grin2bQ01097 1482 aa22.01■■□□□ 1.11
Cln3-203ENSMUST00000098036 Duox2A2AQ99 1517 aa21.99■■□□□ 1.11
Cln3-203ENSMUST00000098036 Ift140E9PY46 1464 aa21.93■■□□□ 1.1
Cln3-203ENSMUST00000098036 Samd9lQ69Z37 1561 aa21.86■■□□□ 1.09
Cln3-203ENSMUST00000098036 Rusc2Q80U22 1514 aa21.84■■□□□ 1.09
Cln3-203ENSMUST00000098036 Efcab5A0JP43 1406 aa21.83■■□□□ 1.09
Cln3-203ENSMUST00000098036 NrkQ9R0G8 1455 aa21.8■■□□□ 1.08
Cln3-203ENSMUST00000098036 Disp1Q3TDN0 1521 aa21.79■■□□□ 1.08
Cln3-203ENSMUST00000098036 Pbrm1Q8BSQ9 1634 aaKnown RBP21.76■■□□□ 1.07
Cln3-203ENSMUST00000098036 Setd1bQ8CFT2 1985 aa21.75■■□□□ 1.07
Cln3-203ENSMUST00000098036 Gab3Q8BSM5 595 aa21.74■■□□□ 1.07
Cln3-203ENSMUST00000098036 Shroom4Q1W617 1475 aa21.73■■□□□ 1.07
Cln3-203ENSMUST00000098036 Rapgef2Q8CHG7 1496 aa21.73■■□□□ 1.07
Cln3-203ENSMUST00000098036 Shroom2A2ALU4 1481 aa21.72■■□□□ 1.07
Cln3-203ENSMUST00000098036 PtprkP35822 1457 aa21.7■■□□□ 1.06
Cln3-203ENSMUST00000098036 Rad54l2Q99NG0 1466 aa21.69■■□□□ 1.06
Cln3-203ENSMUST00000098036 Nup160Q9Z0W3 1402 aaKnown RBP21.69■■□□□ 1.06
Cln3-203ENSMUST00000098036 Cc2d2bA0A286YDU8 1405 aa21.64■■□□□ 1.06
Cln3-203ENSMUST00000098036 Grin2aP35436 1464 aa21.62■■□□□ 1.05
Cln3-203ENSMUST00000098036 Magi3Q9EQJ9 1476 aa21.62■■□□□ 1.05
Cln3-203ENSMUST00000098036 SynmQ70IV5 1561 aa21.59■■□□□ 1.05
Cln3-203ENSMUST00000098036 Dnajc5P60904 198 aa21.57■■□□□ 1.04
Cln3-203ENSMUST00000098036 Zeb1Q64318 1117 aa21.55■■□□□ 1.04
Cln3-203ENSMUST00000098036 Pabpn1Q8CCS6 302 aaKnown RBP21.54■■□□□ 1.04
Cln3-203ENSMUST00000098036 Cep162Q6ZQ06 1403 aa21.53■■□□□ 1.04
Cln3-203ENSMUST00000098036 AqrQ8CFQ3 1481 aaKnown RBP21.53■■□□□ 1.04
Cln3-203ENSMUST00000098036 Npm2Q80W85 207 aa21.53■■□□□ 1.04
Cln3-203ENSMUST00000098036 Eif4g1Q6NZJ6 1600 aaKnown RBP21.52■■□□□ 1.04
Cln3-203ENSMUST00000098036 Pla2r1Q62028 1487 aa21.52■■□□□ 1.04
Cln3-203ENSMUST00000098036 Pelp1Q9DBD5 1123 aaKnown RBP21.49■■□□□ 1.03
Cln3-203ENSMUST00000098036 Gpatch8A2A6A1 1505 aa21.48■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms