RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 ChgaP26339 463 aaKnown RBP19.48■□□□□ 0.71
Clcn3-203ENSMUST00000093490 Cspp1B2RX88 1205 aa19.48■□□□□ 0.71
Clcn3-203ENSMUST00000093490 Anapc15P60007 132 aa19.47■□□□□ 0.71
Clcn3-203ENSMUST00000093490 VgfQ0VGU4 617 aa19.47■□□□□ 0.71
Clcn3-203ENSMUST00000093490 Map3k5O35099 1380 aa19.46■□□□□ 0.71
Clcn3-203ENSMUST00000093490 Lamc3Q9R0B6 1581 aa19.46■□□□□ 0.71
Clcn3-203ENSMUST00000093490 CgnP59242 1191 aa19.46■□□□□ 0.71
Clcn3-203ENSMUST00000093490 Tpm3-rs7D3Z2H9 248 aa19.46■□□□□ 0.71
Clcn3-203ENSMUST00000093490 Sirt1Q923E4 737 aa19.45■□□□□ 0.7
Clcn3-203ENSMUST00000093490 Bcl11bQ99PV8 884 aa19.45■□□□□ 0.7
Clcn3-203ENSMUST00000093490 Znf330Q922H9 316 aa19.45■□□□□ 0.7
Clcn3-203ENSMUST00000093490 Kiaa0754Q69ZZ9 979 aa19.43■□□□□ 0.7
Clcn3-203ENSMUST00000093490 Glipr1l2Q9CQ35 332 aa19.43■□□□□ 0.7
Clcn3-203ENSMUST00000093490 SlkO54988 1233 aa19.43■□□□□ 0.7
Clcn3-203ENSMUST00000093490 Pibf1E9Q6K3 756 aa19.42■□□□□ 0.7
Clcn3-203ENSMUST00000093490 GorabQ8BRM2 368 aa19.42■□□□□ 0.7
Clcn3-203ENSMUST00000093490 Atp2b2Q9R0K7 1198 aa19.42■□□□□ 0.7
Clcn3-203ENSMUST00000093490 SynmQ70IV5 1561 aa19.41■□□□□ 0.7
Clcn3-203ENSMUST00000093490 Ttll5Q8CHB8 1328 aa19.41■□□□□ 0.7
Clcn3-203ENSMUST00000093490 Ush1cQ9ES64 910 aa19.4■□□□□ 0.7
Clcn3-203ENSMUST00000093490 Ccdc47Q9D024 483 aaKnown RBP19.39■□□□□ 0.7
Clcn3-203ENSMUST00000093490 Q9D9H8 365 aa19.39■□□□□ 0.69
Clcn3-203ENSMUST00000093490 A2mQ6GQT1 1474 aa19.39■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Trim30aP15533 496 aa19.39■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Ccdc60Q8C4J0 545 aa19.39■□□□□ 0.69
Clcn3-203ENSMUST00000093490 G3bp1P97855 465 aaKnown RBP19.39■□□□□ 0.69
Clcn3-203ENSMUST00000093490 TatQ8QZR1 454 aa19.38■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Ddx11Q6AXC6 880 aa19.38■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Top2bQ64511 1612 aa19.38■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Myom3A2ABU4 1439 aa19.38■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Brpf1B2RRD7 1212 aa19.38■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Gnai1B2RSH2 354 aa19.37■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Gnai3Q9DC51 354 aa19.37■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Tiam1Q60610 1591 aa19.37■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Zpr1Q62384 459 aa19.36■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Arap1Q4LDD4 1452 aa19.36■□□□□ 0.69
Clcn3-203ENSMUST00000093490 SetQ9EQU5 289 aaKnown RBP19.35■□□□□ 0.69
Clcn3-203ENSMUST00000093490 GphnQ8BUV3 769 aaKnown RBP19.35■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Gimap6Q8K349 305 aa19.35■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Kif16bB1AVY7 1312 aa19.35■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Tceal9Q9DD24 104 aa19.35■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Slc4a10Q5DTL9 1118 aa19.34■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Pip4k2bQ80XI4 416 aa19.34■□□□□ 0.69
Clcn3-203ENSMUST00000093490 St18Q80TY4 1045 aa19.34■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Casq1O09165 405 aa19.34■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Gnl3lQ6PGG6 577 aaKnown RBP19.34■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Magi1Q6RHR9 1471 aa19.33■□□□□ 0.69
Clcn3-203ENSMUST00000093490 Ppm1fQ8CGA0 452 aa19.33■□□□□ 0.68
Clcn3-203ENSMUST00000093490 Map7d2A2AG50 781 aa19.32■□□□□ 0.68
Clcn3-203ENSMUST00000093490 Ecm2Q5FW85 670 aa19.32■□□□□ 0.68
Clcn3-203ENSMUST00000093490 Afap1Q80YS6 731 aa19.31■□□□□ 0.68
Clcn3-203ENSMUST00000093490 Swt1Q9DBQ9 907 aa19.31■□□□□ 0.68
Clcn3-203ENSMUST00000093490 Caskin1Q6P9K8 1431 aa19.31■□□□□ 0.68
Clcn3-203ENSMUST00000093490 Neo1P97798 1493 aa19.3■□□□□ 0.68
Clcn3-203ENSMUST00000093490 Sf3a1Q8K4Z5 791 aaKnown RBP19.3■□□□□ 0.68
Clcn3-203ENSMUST00000093490 Slc52a2Q9D8F3 450 aa19.29■□□□□ 0.68
Clcn3-203ENSMUST00000093490 Ccdc146E9Q9F7 977 aa19.29■□□□□ 0.68
Clcn3-203ENSMUST00000093490 Grin2aP35436 1464 aa19.29■□□□□ 0.68
Clcn3-203ENSMUST00000093490 Rabep1O35551 862 aa19.29■□□□□ 0.68
Clcn3-203ENSMUST00000093490 Trim58Q5NCC9 485 aa19.29■□□□□ 0.68
Clcn3-203ENSMUST00000093490 Fmnl2A2APV2 1086 aa19.28■□□□□ 0.68
Clcn3-203ENSMUST00000093490 Filip1lQ6P6L0 1131 aa19.28■□□□□ 0.68
Clcn3-203ENSMUST00000093490 Mug1P28665 1476 aa19.28■□□□□ 0.68
Clcn3-203ENSMUST00000093490 PtprkP35822 1457 aa19.27■□□□□ 0.68
Clcn3-203ENSMUST00000093490 Prkrip1Q9CWV6 186 aaKnown RBP19.27■□□□□ 0.67
Clcn3-203ENSMUST00000093490 NexnQ7TPW1 607 aa19.26■□□□□ 0.67
Clcn3-203ENSMUST00000093490 HypkQ9CR41 129 aa19.26■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Ak7Q9D2H2 614 aa19.26■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Mlh3A0A1Y7VMP7 1443 aa19.26■□□□□ 0.67
Clcn3-203ENSMUST00000093490 AppP12023 770 aa19.26■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Plekhd1B2RPU2 505 aa19.26■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Atl3Q91YH5 541 aa19.25■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Gprasp1Q5U4C1 1347 aa19.25■□□□□ 0.67
Clcn3-203ENSMUST00000093490 CrebrfQ8CDG5 640 aaKnown RBP19.25■□□□□ 0.67
Clcn3-203ENSMUST00000093490 ZgpatQ8VDM1 511 aa19.25■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Nap1l3Q794H2 544 aa19.24■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Ccer1Q9CQL2 403 aa19.24■□□□□ 0.67
Clcn3-203ENSMUST00000093490 KinQ8K339 391 aa19.24■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Hmgb2P30681 210 aaKnown RBP19.23■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Gpatch11Q3UFS4 262 aa19.23■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Tpm3P21107 285 aaKnown RBP19.23■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Zfp644E9QA22 1323 aa19.23■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Evi5lH3BKQ3 813 aa19.22■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Usp16Q99LG0 825 aa19.22■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Senp3Q9EP97 568 aaKnown RBP19.22■□□□□ 0.67
Clcn3-203ENSMUST00000093490 OvosQ3UU35 1456 aa19.22■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Gm10471E9Q1C7 252 aa19.21■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Sf3b2Q3UJB0 878 aaKnown RBP19.21■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Tpd52l1O54818 204 aa19.21■□□□□ 0.67
Clcn3-203ENSMUST00000093490 Srek1Q8BZX4 494 aaKnown RBP19.2■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Ccdc171E9Q1U1 1324 aa19.2■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Kif4P33174 1231 aa19.2■□□□□ 0.66
Clcn3-203ENSMUST00000093490 NexmifQ5DTT1 1515 aa19.2■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Cplx2P84086 134 aa19.19■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Rab3gap2Q8BMG7 1366 aa19.18■□□□□ 0.66
Clcn3-203ENSMUST00000093490 PhaxQ9JJT9 385 aaKnown RBP19.18■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Ncapd3Q6ZQK0 1506 aa19.18■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Evc2Q8K1G2 1220 aa19.18■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Plekhh1Q80TI1 1356 aa19.17■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Eif2s2Q99L45 331 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 80.7 ms