RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Ehbp1l1Q99MS7 1716 aa18.26■□□□□ 0.51
Ccdc28a-202ENSMUST00000080860 Rprd2Q6NXI6 1469 aaKnown RBP18.26■□□□□ 0.51
Ccdc28a-202ENSMUST00000080860 Trak1Q6PD31 939 aa18.25■□□□□ 0.51
Ccdc28a-202ENSMUST00000080860 Prrc2bQ7TPM1 1486 aaKnown RBP18.22■□□□□ 0.51
Ccdc28a-202ENSMUST00000080860 Slit3Q9WVB4 1523 aa18.22■□□□□ 0.51
Ccdc28a-202ENSMUST00000080860 Ppip5k1A2ARP1 1436 aa18.21■□□□□ 0.51
Ccdc28a-202ENSMUST00000080860 IghaA0A0A6YXW6 389 aa18.2■□□□□ 0.5
Ccdc28a-202ENSMUST00000080860 AatkQ80YE4 1365 aa18.19■□□□□ 0.5
Ccdc28a-202ENSMUST00000080860 Arid4bA2CG63 1314 aaKnown RBP18.18■□□□□ 0.5
Ccdc28a-202ENSMUST00000080860 Dhx9O70133 1380 aaKnown RBP18.17■□□□□ 0.5
Ccdc28a-202ENSMUST00000080860 Mphosph9A6H5Y1 991 aa18.17■□□□□ 0.5
Ccdc28a-202ENSMUST00000080860 Arhgef28P97433 1693 aa18.17■□□□□ 0.5
Ccdc28a-202ENSMUST00000080860 ErbinQ80TH2 1402 aa18.16■□□□□ 0.5
Ccdc28a-202ENSMUST00000080860 Myom1Q62234 1667 aaKnown RBP18.16■□□□□ 0.5
Ccdc28a-202ENSMUST00000080860 Arap3Q8R5G7 1538 aa18.16■□□□□ 0.5
Ccdc28a-202ENSMUST00000080860 Col18a1P39061 1774 aa18.16■□□□□ 0.5
Ccdc28a-202ENSMUST00000080860 Dot1lQ6XZL8 1540 aa18.14■□□□□ 0.49
Ccdc28a-202ENSMUST00000080860 Txndc2Q6P902 515 aa18.14■□□□□ 0.49
Ccdc28a-202ENSMUST00000080860 Mbd5B1AYB6 1498 aa18.14■□□□□ 0.49
Ccdc28a-202ENSMUST00000080860 Plxnc1Q9QZC2 1574 aa18.13■□□□□ 0.49
Ccdc28a-202ENSMUST00000080860 MaddQ80U28 1577 aa18.12■□□□□ 0.49
Ccdc28a-202ENSMUST00000080860 Ccer2J3QPU5 274 aa18.11■□□□□ 0.49
Ccdc28a-202ENSMUST00000080860 Sall3Q62255 1320 aa18.1■□□□□ 0.49
Ccdc28a-202ENSMUST00000080860 Hspa1lP16627 641 aa18.1■□□□□ 0.49
Ccdc28a-202ENSMUST00000080860 Pik3r4Q8VD65 1358 aa18.09■□□□□ 0.49
Ccdc28a-202ENSMUST00000080860 Hdac5Q9Z2V6 1113 aa18.08■□□□□ 0.48
Ccdc28a-202ENSMUST00000080860 Cdk13Q69ZA1 1511 aaKnown RBP18.08■□□□□ 0.48
Ccdc28a-202ENSMUST00000080860 Rims1Q99NE5 1463 aa18.07■□□□□ 0.48
Ccdc28a-202ENSMUST00000080860 AU022751B1B0V2 589 aa18.07■□□□□ 0.48
Ccdc28a-202ENSMUST00000080860 Ankrd36D3Z4K0 1415 aa18.06■□□□□ 0.48
Ccdc28a-202ENSMUST00000080860 DnmbpQ6TXD4 1580 aa18.06■□□□□ 0.48
Ccdc28a-202ENSMUST00000080860 Amigo3Q8C2S7 508 aa18.06■□□□□ 0.48
Ccdc28a-202ENSMUST00000080860 Stk24Q99KH8 431 aa18.06■□□□□ 0.48
Ccdc28a-202ENSMUST00000080860 Rock1P70335 1354 aa18.05■□□□□ 0.48
Ccdc28a-202ENSMUST00000080860 Psme1P97371 249 aa18.04■□□□□ 0.48
Ccdc28a-202ENSMUST00000080860 Unc13bQ9Z1N9 1602 aa18.04■□□□□ 0.48
Ccdc28a-202ENSMUST00000080860 Ube2uB1AUC4 352 aa18.03■□□□□ 0.48
Ccdc28a-202ENSMUST00000080860 Pkd2O35245 966 aa18.02■□□□□ 0.48
Ccdc28a-202ENSMUST00000080860 Tns3Q5SSZ5 1440 aa18.01■□□□□ 0.47
Ccdc28a-202ENSMUST00000080860 Erich6D3Z6S9 713 aa18.01■□□□□ 0.47
Ccdc28a-202ENSMUST00000080860 Adamts13Q769J6 1426 aa17.98■□□□□ 0.47
Ccdc28a-202ENSMUST00000080860 Tulp4Q9JIL5 1547 aa17.98■□□□□ 0.47
Ccdc28a-202ENSMUST00000080860 Cps1Q8C196 1500 aa17.98■□□□□ 0.47
Ccdc28a-202ENSMUST00000080860 Asxl2Q8BZ32 1370 aa17.97■□□□□ 0.47
Ccdc28a-202ENSMUST00000080860 Washc2Q6PGL7 1334 aa17.97■□□□□ 0.47
Ccdc28a-202ENSMUST00000080860 P3h3Q8CG70 732 aa17.95■□□□□ 0.46
Ccdc28a-202ENSMUST00000080860 Nwd1A6H603 1563 aa17.95■□□□□ 0.46
Ccdc28a-202ENSMUST00000080860 Gm13695A2AK44 830 aa17.93■□□□□ 0.46
Ccdc28a-202ENSMUST00000080860 Brinp3Q499E0 766 aa17.93■□□□□ 0.46
Ccdc28a-202ENSMUST00000080860 Ift172Q6VH22 1749 aa17.9■□□□□ 0.46
Ccdc28a-202ENSMUST00000080860 Slc52a2Q9D8F3 450 aa17.9■□□□□ 0.46
Ccdc28a-202ENSMUST00000080860 Col14a1Q80X19 1797 aa17.89■□□□□ 0.45
Ccdc28a-202ENSMUST00000080860 Slain2Q8CI08 581 aa17.88■□□□□ 0.45
Ccdc28a-202ENSMUST00000080860 Pik3c2aQ61194 1686 aa17.87■□□□□ 0.45
Ccdc28a-202ENSMUST00000080860 Cep152A2AUM9 1736 aaKnown RBP17.87■□□□□ 0.45
Ccdc28a-202ENSMUST00000080860 Q9D9H8 365 aa17.87■□□□□ 0.45
Ccdc28a-202ENSMUST00000080860 Mroh3A0A1D5RM54 893 aa17.86■□□□□ 0.45
Ccdc28a-202ENSMUST00000080860 Ehmt2Q9Z148 1263 aaKnown RBP17.86■□□□□ 0.45
Ccdc28a-202ENSMUST00000080860 Itsn2Q9Z0R6 1659 aa17.86■□□□□ 0.45
Ccdc28a-202ENSMUST00000080860 NalcnQ8BXR5 1738 aa17.86■□□□□ 0.45
Ccdc28a-202ENSMUST00000080860 Shq1Q7TMX5 569 aa17.84■□□□□ 0.45
Ccdc28a-202ENSMUST00000080860 Dapk1Q80YE7 1442 aa17.83■□□□□ 0.45
Ccdc28a-202ENSMUST00000080860 Usp47Q8BY87 1376 aa17.83■□□□□ 0.45
Ccdc28a-202ENSMUST00000080860 Bcl11bQ99PV8 884 aa17.83■□□□□ 0.44
Ccdc28a-202ENSMUST00000080860 Cdk5rap2Q8K389 1822 aa17.83■□□□□ 0.44
Ccdc28a-202ENSMUST00000080860 GapdhsQ64467 440 aa17.81■□□□□ 0.44
Ccdc28a-202ENSMUST00000080860 Usp32F8VPZ3 1604 aa17.8■□□□□ 0.44
Ccdc28a-202ENSMUST00000080860 C3P01027 1663 aa17.8■□□□□ 0.44
Ccdc28a-202ENSMUST00000080860 Plekhg1F6S200 1446 aa17.8■□□□□ 0.44
Ccdc28a-202ENSMUST00000080860 Kif20bQ80WE4 1774 aaKnown RBP17.79■□□□□ 0.44
Ccdc28a-202ENSMUST00000080860 Wnk3Q80XP9 1757 aa17.79■□□□□ 0.44
Ccdc28a-202ENSMUST00000080860 Sipa1l1Q8C0T5 1782 aa17.79■□□□□ 0.44
Ccdc28a-202ENSMUST00000080860 D430041D05RikF6ZGR6 1678 aa17.78■□□□□ 0.44
Ccdc28a-202ENSMUST00000080860 Tom1O88746 492 aa17.78■□□□□ 0.44
Ccdc28a-202ENSMUST00000080860 HnrnpmQ9D0E1 729 aaKnown RBP17.78■□□□□ 0.44
Ccdc28a-202ENSMUST00000080860 Tmem94Q7TSH8 1360 aa17.78■□□□□ 0.44
Ccdc28a-202ENSMUST00000080860 Ecm2Q5FW85 670 aa17.77■□□□□ 0.44
Ccdc28a-202ENSMUST00000080860 Mier1Q5UAK0 511 aa17.77■□□□□ 0.44
Ccdc28a-202ENSMUST00000080860 DccP70211 1447 aa17.77■□□□□ 0.44
Ccdc28a-202ENSMUST00000080860 KdrP35918 1367 aa17.76■□□□□ 0.43
Ccdc28a-202ENSMUST00000080860 Lrrc7Q80TE7 1490 aa17.74■□□□□ 0.43
Ccdc28a-202ENSMUST00000080860 Cep170bQ80U49 1574 aa17.74■□□□□ 0.43
Ccdc28a-202ENSMUST00000080860 Als2Q920R0 1651 aa17.74■□□□□ 0.43
Ccdc28a-202ENSMUST00000080860 Cpsf1Q9EPU4 1441 aaKnown RBP17.73■□□□□ 0.43
Ccdc28a-202ENSMUST00000080860 Evi5lH3BKQ3 813 aa17.73■□□□□ 0.43
Ccdc28a-202ENSMUST00000080860 Gimap5Q8BWF2 308 aa17.73■□□□□ 0.43
Ccdc28a-202ENSMUST00000080860 Rreb1Q3UH06 1700 aaKnown RBP17.72■□□□□ 0.43
Ccdc28a-202ENSMUST00000080860 Camta1A2A891 1682 aa17.72■□□□□ 0.43
Ccdc28a-202ENSMUST00000080860 C5P06684 1680 aa17.72■□□□□ 0.43
Ccdc28a-202ENSMUST00000080860 Sipa1l2Q80TE4 1722 aa17.72■□□□□ 0.43
Ccdc28a-202ENSMUST00000080860 Atp1b4Q99ME6 356 aa17.71■□□□□ 0.43
Ccdc28a-202ENSMUST00000080860 Pik3c2bE9QAN8 1632 aa17.7■□□□□ 0.42
Ccdc28a-202ENSMUST00000080860 Mapk8ip2Q9ERE9 830 aa17.7■□□□□ 0.42
Ccdc28a-202ENSMUST00000080860 Adgrl1Q80TR1 1466 aa17.69■□□□□ 0.42
Ccdc28a-202ENSMUST00000080860 Polr3aB2RXC6 1390 aa17.68■□□□□ 0.42
Ccdc28a-202ENSMUST00000080860 Ttll13A4Q9F6 804 aa17.68■□□□□ 0.42
Ccdc28a-202ENSMUST00000080860 Ifit1bl1D3Z6F0 470 aa17.68■□□□□ 0.42
Ccdc28a-202ENSMUST00000080860 Puf60Q3UEB3 564 aaKnown RBP17.68■□□□□ 0.42
Ccdc28a-202ENSMUST00000080860 Rgl3Q3UYI5 709 aa17.67■□□□□ 0.42
Ccdc28a-202ENSMUST00000080860 Atf3Q60765 181 aa17.67■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms