RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 Gemin5Q8BX17 1502 aaKnown RBP35,86■■■■□ 3,33
Cpsf4-201ENSMUST00000070487 Ltbp4Q8K4G1 1666 aa35,86■■■■□ 3,33
Cpsf4-201ENSMUST00000070487 Eid3Q3V124 375 aa35,84■■■■□ 3,33
Cpsf4-201ENSMUST00000070487 Ehbp1l1Q99MS7 1716 aa35,84■■■■□ 3,33
Cpsf4-201ENSMUST00000070487 Dot1lQ6XZL8 1540 aa35,84■■■■□ 3,33
Cpsf4-201ENSMUST00000070487 Psme1P97371 249 aa35,83■■■■□ 3,33
Cpsf4-201ENSMUST00000070487 P3h3Q8CG70 732 aa35,83■■■■□ 3,33
Cpsf4-201ENSMUST00000070487 Mroh3A0A1D5RM54 893 aa35,79■■■■□ 3,32
Cpsf4-201ENSMUST00000070487 Rprd2Q6NXI6 1469 aaKnown RBP35,78■■■■□ 3,32
Cpsf4-201ENSMUST00000070487 Gm13695A2AK44 830 aa35,77■■■■□ 3,32
Cpsf4-201ENSMUST00000070487 Rapgef3Q8VCC8 918 aa35,77■■■■□ 3,32
Cpsf4-201ENSMUST00000070487 Rock1P70335 1354 aa35,76■■■■□ 3,32
Cpsf4-201ENSMUST00000070487 Lmtk3Q5XJV6 1424 aa35,75■■■■□ 3,31
Cpsf4-201ENSMUST00000070487 PplQ9R269 1755 aa35,72■■■■□ 3,31
Cpsf4-201ENSMUST00000070487 Zc3h13E9Q784 1729 aaKnown RBP35,71■■■■□ 3,31
Cpsf4-201ENSMUST00000070487 Washc2Q6PGL7 1334 aa35,7■■■■□ 3,31
Cpsf4-201ENSMUST00000070487 Usp47Q8BY87 1376 aa35,7■■■■□ 3,31
Cpsf4-201ENSMUST00000070487 PalldQ9ET54 1408 aa35,7■■■■□ 3,31
Cpsf4-201ENSMUST00000070487 AU022751B1B0V2 589 aa35,66■■■■□ 3,3
Cpsf4-201ENSMUST00000070487 Nrxn3Q6P9K9 1571 aa35,66■■■■□ 3,3
Cpsf4-201ENSMUST00000070487 Eif2ak4Q9QZ05 1648 aa35,66■■■■□ 3,3
Cpsf4-201ENSMUST00000070487 Iqgap1Q9JKF1 1657 aaKnown RBP35,65■■■■□ 3,3
Cpsf4-201ENSMUST00000070487 Myo3aQ8K3H5 1613 aa35,63■■■■□ 3,29
Cpsf4-201ENSMUST00000070487 Hspa5P20029 655 aaKnown RBP35,61■■■■□ 3,29
Cpsf4-201ENSMUST00000070487 IghaA0A0A6YXW6 389 aa35,6■■■■□ 3,29
Cpsf4-201ENSMUST00000070487 Rgl3Q3UYI5 709 aa35,59■■■■□ 3,29
Cpsf4-201ENSMUST00000070487 Atp1b4Q99ME6 356 aa35,59■■■■□ 3,29
Cpsf4-201ENSMUST00000070487 Med1Q925J9 1575 aa35,56■■■■□ 3,28
Cpsf4-201ENSMUST00000070487 PzpQ61838 1495 aa35,55■■■■□ 3,28
Cpsf4-201ENSMUST00000070487 Plxnc1Q9QZC2 1574 aa35,54■■■■□ 3,28
Cpsf4-201ENSMUST00000070487 Arhgef28P97433 1693 aa35,54■■■■□ 3,28
Cpsf4-201ENSMUST00000070487 Slit3Q9WVB4 1523 aa35,51■■■■□ 3,27
Cpsf4-201ENSMUST00000070487 Shq1Q7TMX5 569 aa35,49■■■■□ 3,27
Cpsf4-201ENSMUST00000070487 Rims1Q99NE5 1463 aa35,48■■■■□ 3,27
Cpsf4-201ENSMUST00000070487 Asxl2Q8BZ32 1370 aa35,48■■■■□ 3,27
Cpsf4-201ENSMUST00000070487 Tulp4Q9JIL5 1547 aa35,48■■■■□ 3,27
Cpsf4-201ENSMUST00000070487 Q9D9H8 365 aa35,47■■■■□ 3,27
Cpsf4-201ENSMUST00000070487 Myom1Q62234 1667 aaKnown RBP35,47■■■■□ 3,27
Cpsf4-201ENSMUST00000070487 Setd1aE9PYH6 1716 aa35,47■■■■□ 3,27
Cpsf4-201ENSMUST00000070487 Gli3Q61602 1583 aa35,47■■■■□ 3,27
Cpsf4-201ENSMUST00000070487 Adamts13Q769J6 1426 aa35,45■■■■□ 3,27
Cpsf4-201ENSMUST00000070487 Ifit1bl1D3Z6F0 470 aa35,44■■■■□ 3,26
Cpsf4-201ENSMUST00000070487 Slc52a2Q9D8F3 450 aa35,43■■■■□ 3,26
Cpsf4-201ENSMUST00000070487 Tubgcp6G5E8P0 1769 aa35,42■■■■□ 3,26
Cpsf4-201ENSMUST00000070487 Pik3r4Q8VD65 1358 aa35,39■■■■□ 3,26
Cpsf4-201ENSMUST00000070487 Kdm2aP59997 1161 aa35,36■■■■□ 3,25
Cpsf4-201ENSMUST00000070487 Srpk2O54781 681 aaKnown RBP35,35■■■■□ 3,25
Cpsf4-201ENSMUST00000070487 Thsd7aQ69ZU6 1645 aa35,34■■■■□ 3,25
Cpsf4-201ENSMUST00000070487 Grwd1Q810D6 446 aaKnown RBP35,33■■■■□ 3,25
Cpsf4-201ENSMUST00000070487 Os9Q8K2C7 672 aa35,3■■■■□ 3,24
Cpsf4-201ENSMUST00000070487 Cep152A2AUM9 1736 aaKnown RBP35,28■■■■□ 3,24
Cpsf4-201ENSMUST00000070487 Gm20521D3Z5F7 333 aa35,27■■■■□ 3,24
Cpsf4-201ENSMUST00000070487 Fan1Q69ZT1 1020 aa35,27■■■■□ 3,24
Cpsf4-201ENSMUST00000070487 Cdk13Q69ZA1 1511 aaKnown RBP35,25■■■■□ 3,23
Cpsf4-201ENSMUST00000070487 Arap3Q8R5G7 1538 aa35,25■■■■□ 3,23
Cpsf4-201ENSMUST00000070487 MaddQ80U28 1577 aa35,25■■■■□ 3,23
Cpsf4-201ENSMUST00000070487 Neurod1Q60867 357 aa35,24■■■■□ 3,23
Cpsf4-201ENSMUST00000070487 Polr3aB2RXC6 1390 aa35,22■■■■□ 3,23
Cpsf4-201ENSMUST00000070487 Tns3Q5SSZ5 1440 aa35,22■■■■□ 3,23
Cpsf4-201ENSMUST00000070487 Puf60Q3UEB3 564 aaKnown RBP35,21■■■■□ 3,23
Cpsf4-201ENSMUST00000070487 NefmP08553 848 aa35,21■■■■□ 3,23
Cpsf4-201ENSMUST00000070487 HnrnpmQ9D0E1 729 aaKnown RBP35,21■■■■□ 3,23
Cpsf4-201ENSMUST00000070487 Fbxo41Q6NS60 873 aa35,19■■■■□ 3,22
Cpsf4-201ENSMUST00000070487 Utp14aQ640M1 767 aaKnown RBP35,15■■■■□ 3,22
Cpsf4-201ENSMUST00000070487 Stk26Q99JT2 416 aa35,15■■■■□ 3,22
Cpsf4-201ENSMUST00000070487 Cpsf1Q9EPU4 1441 aaKnown RBP35,14■■■■□ 3,22
Cpsf4-201ENSMUST00000070487 Col18a1P39061 1774 aa35,13■■■■□ 3,22
Cpsf4-201ENSMUST00000070487 Amigo3Q8C2S7 508 aa35,11■■■■□ 3,21
Cpsf4-201ENSMUST00000070487 Mbd5B1AYB6 1498 aa35,11■■■■□ 3,21
Cpsf4-201ENSMUST00000070487 Hspa1lP16627 641 aa35,1■■■■□ 3,21
Cpsf4-201ENSMUST00000070487 Slain2Q8CI08 581 aa35,1■■■■□ 3,21
Cpsf4-201ENSMUST00000070487 Cdk5rap2Q8K389 1822 aa35,09■■■■□ 3,21
Cpsf4-201ENSMUST00000070487 Iqsec2Q5DU25 1478 aa35,09■■■■□ 3,21
Cpsf4-201ENSMUST00000070487 Cps1Q8C196 1500 aa35,09■■■■□ 3,21
Cpsf4-201ENSMUST00000070487 Lrrc7Q80TE7 1490 aa35,08■■■■□ 3,21
Cpsf4-201ENSMUST00000070487 Acin1Q9JIX8 1338 aaKnown RBP35,05■■■■□ 3,2
Cpsf4-201ENSMUST00000070487 Tmem94Q7TSH8 1360 aa35,03■■■■□ 3,2
Cpsf4-201ENSMUST00000070487 IqubQ8CDK3 788 aa35,03■■■■□ 3,2
Cpsf4-201ENSMUST00000070487 Evi5lH3BKQ3 813 aa35,02■■■■□ 3,2
Cpsf4-201ENSMUST00000070487 Unc13bQ9Z1N9 1602 aa35,01■■■■□ 3,2
Cpsf4-201ENSMUST00000070487 Mug2P28666 1451 aa35,01■■■■□ 3,2
Cpsf4-201ENSMUST00000070487 TonslQ6NZL6 1363 aa35,01■■■■□ 3,2
Cpsf4-201ENSMUST00000070487 Plekhg1F6S200 1446 aa35■■■■□ 3,19
Cpsf4-201ENSMUST00000070487 Bcl11bQ99PV8 884 aa35■■■■□ 3,19
Cpsf4-201ENSMUST00000070487 Usp40Q8BWR4 1235 aa34,99■■■■□ 3,19
Cpsf4-201ENSMUST00000070487 Ift172Q6VH22 1749 aa34,99■■■■□ 3,19
Cpsf4-201ENSMUST00000070487 Brinp3Q499E0 766 aa34,98■■■■□ 3,19
Cpsf4-201ENSMUST00000070487 Stag3O70576 1240 aa34,94■■■■□ 3,18
Cpsf4-201ENSMUST00000070487 Stard8Q8K031 1019 aa34,94■■■■□ 3,18
Cpsf4-201ENSMUST00000070487 Cep170bQ80U49 1574 aa34,93■■■■□ 3,18
Cpsf4-201ENSMUST00000070487 Col14a1Q80X19 1797 aa34,92■■■■□ 3,18
Cpsf4-201ENSMUST00000070487 Sipa1l1Q8C0T5 1782 aa34,92■■■■□ 3,18
Cpsf4-201ENSMUST00000070487 Q3UJC8 639 aa34,91■■■■□ 3,18
Cpsf4-201ENSMUST00000070487 Nwd1A6H603 1563 aa34,9■■■■□ 3,18
Cpsf4-201ENSMUST00000070487 Nphp4P59240 1425 aa34,88■■■■□ 3,17
Cpsf4-201ENSMUST00000070487 Dapk1Q80YE7 1442 aa34,88■■■■□ 3,17
Cpsf4-201ENSMUST00000070487 Atf3Q60765 181 aa34,87■■■■□ 3,17
Cpsf4-201ENSMUST00000070487 Gtf2e1Q9D0D5 440 aa34,87■■■■□ 3,17
Cpsf4-201ENSMUST00000070487 Rundc1Q0VDN7 615 aa34,86■■■■□ 3,17
Cpsf4-201ENSMUST00000070487 DnmbpQ6TXD4 1580 aa34,85■■■■□ 3,17
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms