RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Gm20521D3Z5F7 333 aa9.57□□□□□ -0.88
Clrn1-202ENSMUST00000055636 DroshaQ5HZJ0 1373 aaKnown RBP9.56□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Myo5cE9Q1F5 1742 aa9.56□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Adamts13Q769J6 1426 aa9.56□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Znf518aB2RRF6 1478 aaKnown RBP9.56□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Ylpm1Q9R0I7 1386 aaKnown RBP9.56□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Iqgap1Q9JKF1 1657 aaKnown RBP9.56□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Cpsf1Q9EPU4 1441 aaKnown RBP9.56□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Gli2Q0VGT2 1544 aa9.55□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Erbb3Q61526 1339 aa9.55□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Rock2P70336 1388 aa9.55□□□□□ -0.88
Clrn1-202ENSMUST00000055636 ErbinQ80TH2 1402 aa9.55□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Cfap65Q3V0B4 1847 aa9.54□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Tulp4Q9JIL5 1547 aa9.54□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Abcc6Q9R1S7 1498 aa9.54□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Srpk2O54781 681 aaKnown RBP9.53□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Plekhg5Q66T02 1073 aa9.53□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Atp1b4Q99ME6 356 aa9.53□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Srcin1Q9QWI6 1250 aa9.53□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Dip2cE9PWR4 1557 aa9.53□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Gtf3c3Q3TMP1 882 aa9.53□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Afap1Q80YS6 731 aa9.53□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Dnajc5gQ8C632 165 aa9.53□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Pank3Q8R2W9 370 aa9.53□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Inpp5dQ9ES52 1191 aa9.53□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Cnga1P29974 684 aa9.52□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Iqcf3Q9D498 203 aa9.52□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Fndc1E9Q043 1732 aa9.52□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Prex1Q69ZK0 1650 aa9.52□□□□□ -0.89
Clrn1-202ENSMUST00000055636 ChgaP26339 463 aaKnown RBP9.51□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Fgd1P52734 960 aa9.51□□□□□ -0.89
Clrn1-202ENSMUST00000055636 AatkQ80YE4 1365 aa9.51□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Slc4a1apE9PX68 744 aa9.51□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Hsp90aa1P07901 733 aaKnown RBP9.51□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Kdm5cP41230 1554 aa9.51□□□□□ -0.89
Clrn1-202ENSMUST00000055636 AnkarA2RT91 1465 aa9.51□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Usp40Q8BWR4 1235 aa9.5□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Ppip5k1A2ARP1 1436 aa9.5□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Kank1E9Q238 1360 aa9.5□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Clasp1Q80TV8 1535 aaKnown RBP9.5□□□□□ -0.89
Clrn1-202ENSMUST00000055636 RereQ80TZ9 1558 aa9.49□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Atp10aO54827 1508 aa9.49□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Q7TT23 1179 aa9.49□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Stk26Q99JT2 416 aa9.49□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Rpgrip1lQ8CG73 1264 aa9.48□□□□□ -0.89
Clrn1-202ENSMUST00000055636 PrxO55103 1391 aa9.48□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Irx3P81067 507 aa9.48□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Mink1Q9JM52 1308 aa9.48□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Plcd4Q8K3R3 807 aa9.47□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Gtf2e1Q9D0D5 440 aa9.47□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Iqgap3F8VQ29 1632 aa9.47□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Cul9Q80TT8 1865 aa9.47□□□□□ -0.89
Clrn1-202ENSMUST00000055636 AU022751B1B0V2 589 aa9.47□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Puf60Q3UEB3 564 aaKnown RBP9.47□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Ccdc9Q8VC31 543 aaKnown RBP9.47□□□□□ -0.89
Clrn1-202ENSMUST00000055636 AglF8VPN4 1532 aa9.47□□□□□ -0.89
Clrn1-202ENSMUST00000055636 AdgbG3UZ78 1657 aa9.47□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Zfp444Q3TDV8 331 aaKnown RBP9.46□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Myo3aQ8K3H5 1613 aa9.46□□□□□ -0.89
Clrn1-202ENSMUST00000055636 Topbp1Q6ZQF0 1515 aa9.46□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Stag3O70576 1240 aa9.45□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Tmem131lQ3U3D7 1597 aa9.45□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Zranb1Q7M760 708 aa9.45□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Uggt2E9Q4X2 1504 aa9.44□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Cdc42bpgQ80UW5 1551 aa9.44□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Zscan10Q3URR7 782 aa9.44□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Prkrip1Q9CWV6 186 aaKnown RBP9.44□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Rad21Q61550 635 aaKnown RBP9.43□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Ttc37F8VPK0 1563 aa9.43□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Tmf1B9EKI3 1091 aa9.43□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Dnajc5P60904 198 aa9.42□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Shq1Q7TMX5 569 aa9.42□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Plch2A2AP18 1501 aa9.42□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Q9D9H8 365 aa9.42□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Abca8aQ8K442 1620 aa9.42□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Ttll13A4Q9F6 804 aa9.41□□□□□ -0.9
Clrn1-202ENSMUST00000055636 DaxxO35613 739 aa9.41□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Fam184bQ0KK56 942 aa9.41□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Pknox2Q8BG99 474 aa9.41□□□□□ -0.9
Clrn1-202ENSMUST00000055636 TnikP83510 1323 aa9.41□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Adgrb3Q80ZF8 1522 aa9.41□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Nkx1-2P42580 305 aa9.41□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Dcaf11Q91VU6 549 aa9.41□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Synj2Q9D2G5 1434 aa9.4□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Asxl2Q8BZ32 1370 aa9.4□□□□□ -0.9
Clrn1-202ENSMUST00000055636 NeflP08551 543 aa9.4□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Knl1Q66JQ7 1612 aa9.4□□□□□ -0.9
Clrn1-202ENSMUST00000055636 Skint5A7XUY5 1461 aa9.4□□□□□ -0.91
Clrn1-202ENSMUST00000055636 4933416C03RikQ3V063 378 aa9.4□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Anp32bQ9EST5 272 aaKnown RBP9.4□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Ehbp1l1Q99MS7 1716 aa9.39□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Ecm2Q5FW85 670 aa9.39□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Tubgcp6G5E8P0 1769 aa9.39□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Qser1A2BIE1 1698 aa9.39□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Zscan21Q07231 555 aa9.39□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Mak16Q8BGS0 296 aaKnown RBP9.39□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Hecw2Q6I6G8 1578 aa9.38□□□□□ -0.91
Clrn1-202ENSMUST00000055636 B4galnt3Q6L8S8 986 aa9.38□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Akap12Q9WTQ5 1684 aa9.38□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Prrc2bQ7TPM1 1486 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms