RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 NefmP08553 848 aa26.9■■□□□ 1.9
Vti1b-201ENSMUST00000055262 P3h3Q8CG70 732 aa26.87■■□□□ 1.89
Vti1b-201ENSMUST00000055262 Gemin5Q8BX17 1502 aaKnown RBP26.86■■□□□ 1.89
Vti1b-201ENSMUST00000055262 Prrc2bQ7TPM1 1486 aaKnown RBP26.86■■□□□ 1.89
Vti1b-201ENSMUST00000055262 Mroh1E0CZ22 1640 aa26.86■■□□□ 1.89
Vti1b-201ENSMUST00000055262 Ehbp1l1Q99MS7 1716 aa26.85■■□□□ 1.89
Vti1b-201ENSMUST00000055262 Ppip5k1A2ARP1 1436 aa26.84■■□□□ 1.89
Vti1b-201ENSMUST00000055262 Gm13695A2AK44 830 aa26.83■■□□□ 1.89
Vti1b-201ENSMUST00000055262 Dot1lQ6XZL8 1540 aa26.83■■□□□ 1.89
Vti1b-201ENSMUST00000055262 Rprd2Q6NXI6 1469 aaKnown RBP26.82■■□□□ 1.88
Vti1b-201ENSMUST00000055262 AatkQ80YE4 1365 aa26.81■■□□□ 1.88
Vti1b-201ENSMUST00000055262 Psme1P97371 249 aa26.81■■□□□ 1.88
Vti1b-201ENSMUST00000055262 Eif2ak4Q9QZ05 1648 aa26.8■■□□□ 1.88
Vti1b-201ENSMUST00000055262 Rapgef3Q8VCC8 918 aa26.79■■□□□ 1.88
Vti1b-201ENSMUST00000055262 Iqgap1Q9JKF1 1657 aaKnown RBP26.79■■□□□ 1.88
Vti1b-201ENSMUST00000055262 Myo3aQ8K3H5 1613 aa26.78■■□□□ 1.88
Vti1b-201ENSMUST00000055262 Usp47Q8BY87 1376 aa26.77■■□□□ 1.88
Vti1b-201ENSMUST00000055262 Rock1P70335 1354 aa26.76■■□□□ 1.87
Vti1b-201ENSMUST00000055262 Hspa5P20029 655 aaKnown RBP26.75■■□□□ 1.87
Vti1b-201ENSMUST00000055262 Nrxn3Q6P9K9 1571 aa26.75■■□□□ 1.87
Vti1b-201ENSMUST00000055262 PplQ9R269 1755 aa26.74■■□□□ 1.87
Vti1b-201ENSMUST00000055262 Zc3h13E9Q784 1729 aaKnown RBP26.74■■□□□ 1.87
Vti1b-201ENSMUST00000055262 Lmtk3Q5XJV6 1424 aa26.71■■□□□ 1.87
Vti1b-201ENSMUST00000055262 Gli3Q61602 1583 aa26.71■■□□□ 1.87
Vti1b-201ENSMUST00000055262 Med1Q925J9 1575 aa26.7■■□□□ 1.87
Vti1b-201ENSMUST00000055262 Mroh3A0A1D5RM54 893 aa26.69■■□□□ 1.86
Vti1b-201ENSMUST00000055262 PalldQ9ET54 1408 aa26.69■■□□□ 1.86
Vti1b-201ENSMUST00000055262 Washc2Q6PGL7 1334 aa26.68■■□□□ 1.86
Vti1b-201ENSMUST00000055262 Atp1b4Q99ME6 356 aa26.67■■□□□ 1.86
Vti1b-201ENSMUST00000055262 IghaA0A0A6YXW6 389 aa26.66■■□□□ 1.86
Vti1b-201ENSMUST00000055262 AU022751B1B0V2 589 aa26.65■■□□□ 1.86
Vti1b-201ENSMUST00000055262 Arhgef28P97433 1693 aa26.65■■□□□ 1.86
Vti1b-201ENSMUST00000055262 Plxnc1Q9QZC2 1574 aa26.64■■□□□ 1.86
Vti1b-201ENSMUST00000055262 Asxl2Q8BZ32 1370 aa26.64■■□□□ 1.85
Vti1b-201ENSMUST00000055262 PzpQ61838 1495 aa26.63■■□□□ 1.85
Vti1b-201ENSMUST00000055262 Setd1aE9PYH6 1716 aa26.63■■□□□ 1.85
Vti1b-201ENSMUST00000055262 Myom1Q62234 1667 aaKnown RBP26.63■■□□□ 1.85
Vti1b-201ENSMUST00000055262 Slit3Q9WVB4 1523 aa26.62■■□□□ 1.85
Vti1b-201ENSMUST00000055262 Tubgcp6G5E8P0 1769 aa26.61■■□□□ 1.85
Vti1b-201ENSMUST00000055262 Rgl3Q3UYI5 709 aa26.6■■□□□ 1.85
Vti1b-201ENSMUST00000055262 TonslQ6NZL6 1363 aa26.58■■□□□ 1.85
Vti1b-201ENSMUST00000055262 Tulp4Q9JIL5 1547 aa26.56■■□□□ 1.84
Vti1b-201ENSMUST00000055262 Shq1Q7TMX5 569 aa26.55■■□□□ 1.84
Vti1b-201ENSMUST00000055262 Q9D9H8 365 aa26.55■■□□□ 1.84
Vti1b-201ENSMUST00000055262 Thsd7aQ69ZU6 1645 aa26.55■■□□□ 1.84
Vti1b-201ENSMUST00000055262 Rims1Q99NE5 1463 aa26.54■■□□□ 1.84
Vti1b-201ENSMUST00000055262 Adamts13Q769J6 1426 aa26.51■■□□□ 1.83
Vti1b-201ENSMUST00000055262 Fbxo41Q6NS60 873 aa26.49■■□□□ 1.83
Vti1b-201ENSMUST00000055262 Ifit1bl1D3Z6F0 470 aa26.47■■□□□ 1.83
Vti1b-201ENSMUST00000055262 Pik3r4Q8VD65 1358 aa26.44■■□□□ 1.82
Vti1b-201ENSMUST00000055262 Tns3Q5SSZ5 1440 aa26.44■■□□□ 1.82
Vti1b-201ENSMUST00000055262 Rpgrip1Q9EPQ2 1331 aa26.43■■□□□ 1.82
Vti1b-201ENSMUST00000055262 Kdm2aP59997 1161 aa26.42■■□□□ 1.82
Vti1b-201ENSMUST00000055262 Os9Q8K2C7 672 aa26.42■■□□□ 1.82
Vti1b-201ENSMUST00000055262 Cep152A2AUM9 1736 aaKnown RBP26.42■■□□□ 1.82
Vti1b-201ENSMUST00000055262 MaddQ80U28 1577 aa26.41■■□□□ 1.82
Vti1b-201ENSMUST00000055262 Cdk13Q69ZA1 1511 aaKnown RBP26.41■■□□□ 1.82
Vti1b-201ENSMUST00000055262 Arap3Q8R5G7 1538 aa26.41■■□□□ 1.82
Vti1b-201ENSMUST00000055262 Srpk2O54781 681 aaKnown RBP26.4■■□□□ 1.82
Vti1b-201ENSMUST00000055262 Hspa1lP16627 641 aa26.4■■□□□ 1.82
Vti1b-201ENSMUST00000055262 Polr3aB2RXC6 1390 aa26.39■■□□□ 1.82
Vti1b-201ENSMUST00000055262 Grwd1Q810D6 446 aaKnown RBP26.39■■□□□ 1.82
Vti1b-201ENSMUST00000055262 Slc52a2Q9D8F3 450 aa26.39■■□□□ 1.82
Vti1b-201ENSMUST00000055262 Cpsf1Q9EPU4 1441 aaKnown RBP26.39■■□□□ 1.81
Vti1b-201ENSMUST00000055262 Mbd5B1AYB6 1498 aa26.38■■□□□ 1.81
Vti1b-201ENSMUST00000055262 Neurod1Q60867 357 aa26.36■■□□□ 1.81
Vti1b-201ENSMUST00000055262 Fan1Q69ZT1 1020 aa26.36■■□□□ 1.81
Vti1b-201ENSMUST00000055262 Bcl11bQ99PV8 884 aa26.36■■□□□ 1.81
Vti1b-201ENSMUST00000055262 HnrnpmQ9D0E1 729 aaKnown RBP26.35■■□□□ 1.81
Vti1b-201ENSMUST00000055262 Iqsec2Q5DU25 1478 aa26.35■■□□□ 1.81
Vti1b-201ENSMUST00000055262 Col18a1P39061 1774 aa26.33■■□□□ 1.81
Vti1b-201ENSMUST00000055262 Amigo3Q8C2S7 508 aa26.33■■□□□ 1.81
Vti1b-201ENSMUST00000055262 Stk26Q99JT2 416 aa26.32■■□□□ 1.8
Vti1b-201ENSMUST00000055262 Cps1Q8C196 1500 aa26.31■■□□□ 1.8
Vti1b-201ENSMUST00000055262 Ecm2Q5FW85 670 aa26.31■■□□□ 1.8
Vti1b-201ENSMUST00000055262 Mug2P28666 1451 aa26.31■■□□□ 1.8
Vti1b-201ENSMUST00000055262 Gm20521D3Z5F7 333 aa26.3■■□□□ 1.8
Vti1b-201ENSMUST00000055262 Lrrc7Q80TE7 1490 aa26.3■■□□□ 1.8
Vti1b-201ENSMUST00000055262 Evi5lH3BKQ3 813 aa26.3■■□□□ 1.8
Vti1b-201ENSMUST00000055262 Puf60Q3UEB3 564 aaKnown RBP26.3■■□□□ 1.8
Vti1b-201ENSMUST00000055262 Utp14aQ640M1 767 aaKnown RBP26.28■■□□□ 1.8
Vti1b-201ENSMUST00000055262 Slain2Q8CI08 581 aa26.28■■□□□ 1.8
Vti1b-201ENSMUST00000055262 Cdk5rap2Q8K389 1822 aa26.28■■□□□ 1.8
Vti1b-201ENSMUST00000055262 Tmem94Q7TSH8 1360 aa26.27■■□□□ 1.8
Vti1b-201ENSMUST00000055262 Las1lA2BE28 776 aaKnown RBP26.27■■□□□ 1.8
Vti1b-201ENSMUST00000055262 Unc13bQ9Z1N9 1602 aa26.26■■□□□ 1.79
Vti1b-201ENSMUST00000055262 Ift172Q6VH22 1749 aa26.25■■□□□ 1.79
Vti1b-201ENSMUST00000055262 Brinp3Q499E0 766 aa26.23■■□□□ 1.79
Vti1b-201ENSMUST00000055262 Cep170bQ80U49 1574 aa26.21■■□□□ 1.79
Vti1b-201ENSMUST00000055262 Dapk1Q80YE7 1442 aa26.2■■□□□ 1.79
Vti1b-201ENSMUST00000055262 Sipa1l1Q8C0T5 1782 aa26.18■■□□□ 1.78
Vti1b-201ENSMUST00000055262 DnmbpQ6TXD4 1580 aa26.18■■□□□ 1.78
Vti1b-201ENSMUST00000055262 Col14a1Q80X19 1797 aa26.17■■□□□ 1.78
Vti1b-201ENSMUST00000055262 Nwd1A6H603 1563 aa26.17■■□□□ 1.78
Vti1b-201ENSMUST00000055262 RalgapbQ8BQZ4 1484 aa26.15■■□□□ 1.78
Vti1b-201ENSMUST00000055262 Plekhg1F6S200 1446 aa26.15■■□□□ 1.78
Vti1b-201ENSMUST00000055262 NalcnQ8BXR5 1738 aa26.14■■□□□ 1.78
Vti1b-201ENSMUST00000055262 IqubQ8CDK3 788 aa26.14■■□□□ 1.78
Vti1b-201ENSMUST00000055262 Rreb1Q3UH06 1700 aaKnown RBP26.13■■□□□ 1.77
Vti1b-201ENSMUST00000055262 Rundc1Q0VDN7 615 aa26.12■■□□□ 1.77
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms