RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 AU022751B1B0V2 589 aa16.8■□□□□ 0.28
Ccdc28b-201ENSMUST00000030586 Fbxo41Q6NS60 873 aa16.79■□□□□ 0.28
Ccdc28b-201ENSMUST00000030586 Gemin5Q8BX17 1502 aaKnown RBP16.79■□□□□ 0.28
Ccdc28b-201ENSMUST00000030586 P3h3Q8CG70 732 aa16.78■□□□□ 0.28
Ccdc28b-201ENSMUST00000030586 Eif2ak4Q9QZ05 1648 aa16.78■□□□□ 0.28
Ccdc28b-201ENSMUST00000030586 Dot1lQ6XZL8 1540 aa16.77■□□□□ 0.28
Ccdc28b-201ENSMUST00000030586 Prdm2A2A7B5 1709 aaKnown RBP16.77■□□□□ 0.28
Ccdc28b-201ENSMUST00000030586 Psme1P97371 249 aa16.77■□□□□ 0.28
Ccdc28b-201ENSMUST00000030586 Gli3Q61602 1583 aa16.77■□□□□ 0.27
Ccdc28b-201ENSMUST00000030586 Nrxn3Q6P9K9 1571 aa16.77■□□□□ 0.27
Ccdc28b-201ENSMUST00000030586 Asxl2Q8BZ32 1370 aa16.77■□□□□ 0.27
Ccdc28b-201ENSMUST00000030586 PzpQ61838 1495 aa16.74■□□□□ 0.27
Ccdc28b-201ENSMUST00000030586 Washc2Q6PGL7 1334 aa16.73■□□□□ 0.27
Ccdc28b-201ENSMUST00000030586 Lmtk3Q5XJV6 1424 aa16.73■□□□□ 0.27
Ccdc28b-201ENSMUST00000030586 Eid3Q3V124 375 aa16.73■□□□□ 0.27
Ccdc28b-201ENSMUST00000030586 Med1Q925J9 1575 aa16.72■□□□□ 0.27
Ccdc28b-201ENSMUST00000030586 Iqgap1Q9JKF1 1657 aaKnown RBP16.72■□□□□ 0.27
Ccdc28b-201ENSMUST00000030586 PalldQ9ET54 1408 aa16.72■□□□□ 0.27
Ccdc28b-201ENSMUST00000030586 Myo3aQ8K3H5 1613 aa16.72■□□□□ 0.27
Ccdc28b-201ENSMUST00000030586 Ppip5k1A2ARP1 1436 aa16.71■□□□□ 0.27
Ccdc28b-201ENSMUST00000030586 Ehbp1l1Q99MS7 1716 aa16.7■□□□□ 0.26
Ccdc28b-201ENSMUST00000030586 Gm13695A2AK44 830 aa16.7■□□□□ 0.26
Ccdc28b-201ENSMUST00000030586 Rprd2Q6NXI6 1469 aaKnown RBP16.69■□□□□ 0.26
Ccdc28b-201ENSMUST00000030586 Amigo3Q8C2S7 508 aa16.69■□□□□ 0.26
Ccdc28b-201ENSMUST00000030586 PplQ9R269 1755 aa16.67■□□□□ 0.26
Ccdc28b-201ENSMUST00000030586 Slit3Q9WVB4 1523 aa16.67■□□□□ 0.26
Ccdc28b-201ENSMUST00000030586 Mroh3A0A1D5RM54 893 aa16.67■□□□□ 0.26
Ccdc28b-201ENSMUST00000030586 Tubgcp6G5E8P0 1769 aa16.66■□□□□ 0.26
Ccdc28b-201ENSMUST00000030586 Rock1P70335 1354 aa16.65■□□□□ 0.26
Ccdc28b-201ENSMUST00000030586 Adamts13Q769J6 1426 aa16.65■□□□□ 0.26
Ccdc28b-201ENSMUST00000030586 Q9D9H8 365 aa16.65■□□□□ 0.26
Ccdc28b-201ENSMUST00000030586 Usp47Q8BY87 1376 aa16.64■□□□□ 0.26
Ccdc28b-201ENSMUST00000030586 Ankrd36D3Z4K0 1415 aa16.64■□□□□ 0.25
Ccdc28b-201ENSMUST00000030586 Hspa1lP16627 641 aa16.64■□□□□ 0.25
Ccdc28b-201ENSMUST00000030586 Hspa5P20029 655 aaKnown RBP16.64■□□□□ 0.25
Ccdc28b-201ENSMUST00000030586 Hdac5Q9Z2V6 1113 aa16.64■□□□□ 0.25
Ccdc28b-201ENSMUST00000030586 Zc3h13E9Q784 1729 aaKnown RBP16.64■□□□□ 0.25
Ccdc28b-201ENSMUST00000030586 Thsd7aQ69ZU6 1645 aa16.63■□□□□ 0.25
Ccdc28b-201ENSMUST00000030586 Arhgef28P97433 1693 aa16.62■□□□□ 0.25
Ccdc28b-201ENSMUST00000030586 Myom1Q62234 1667 aaKnown RBP16.62■□□□□ 0.25
Ccdc28b-201ENSMUST00000030586 Shq1Q7TMX5 569 aa16.62■□□□□ 0.25
Ccdc28b-201ENSMUST00000030586 Rims1Q99NE5 1463 aa16.61■□□□□ 0.25
Ccdc28b-201ENSMUST00000030586 Rgl3Q3UYI5 709 aa16.61■□□□□ 0.25
Ccdc28b-201ENSMUST00000030586 Atp1b4Q99ME6 356 aa16.61■□□□□ 0.25
Ccdc28b-201ENSMUST00000030586 Setd1aE9PYH6 1716 aa16.6■□□□□ 0.25
Ccdc28b-201ENSMUST00000030586 Tulp4Q9JIL5 1547 aa16.6■□□□□ 0.25
Ccdc28b-201ENSMUST00000030586 Plxnc1Q9QZC2 1574 aa16.59■□□□□ 0.25
Ccdc28b-201ENSMUST00000030586 Mbd5B1AYB6 1498 aa16.57■□□□□ 0.24
Ccdc28b-201ENSMUST00000030586 Tns3Q5SSZ5 1440 aa16.55■□□□□ 0.24
Ccdc28b-201ENSMUST00000030586 Ifit1bl1D3Z6F0 470 aa16.55■□□□□ 0.24
Ccdc28b-201ENSMUST00000030586 Pik3r4Q8VD65 1358 aa16.54■□□□□ 0.24
Ccdc28b-201ENSMUST00000030586 HnrnpmQ9D0E1 729 aaKnown RBP16.54■□□□□ 0.24
Ccdc28b-201ENSMUST00000030586 Col18a1P39061 1774 aa16.52■□□□□ 0.24
Ccdc28b-201ENSMUST00000030586 Arap3Q8R5G7 1538 aa16.52■□□□□ 0.24
Ccdc28b-201ENSMUST00000030586 Kdm2aP59997 1161 aa16.52■□□□□ 0.24
Ccdc28b-201ENSMUST00000030586 Ecm2Q5FW85 670 aa16.52■□□□□ 0.24
Ccdc28b-201ENSMUST00000030586 Slain2Q8CI08 581 aa16.52■□□□□ 0.24
Ccdc28b-201ENSMUST00000030586 Iqsec2Q5DU25 1478 aa16.52■□□□□ 0.23
Ccdc28b-201ENSMUST00000030586 Bcl11bQ99PV8 884 aa16.51■□□□□ 0.23
Ccdc28b-201ENSMUST00000030586 Slc52a2Q9D8F3 450 aa16.51■□□□□ 0.23
Ccdc28b-201ENSMUST00000030586 Brinp3Q499E0 766 aa16.5■□□□□ 0.23
Ccdc28b-201ENSMUST00000030586 Grwd1Q810D6 446 aaKnown RBP16.5■□□□□ 0.23
Ccdc28b-201ENSMUST00000030586 MaddQ80U28 1577 aa16.5■□□□□ 0.23
Ccdc28b-201ENSMUST00000030586 Fan1Q69ZT1 1020 aa16.49■□□□□ 0.23
Ccdc28b-201ENSMUST00000030586 Mapk8ip2Q9ERE9 830 aa16.49■□□□□ 0.23
Ccdc28b-201ENSMUST00000030586 Evi5lH3BKQ3 813 aa16.48■□□□□ 0.23
Ccdc28b-201ENSMUST00000030586 Tmem94Q7TSH8 1360 aa16.48■□□□□ 0.23
Ccdc28b-201ENSMUST00000030586 Puf60Q3UEB3 564 aaKnown RBP16.47■□□□□ 0.23
Ccdc28b-201ENSMUST00000030586 Stk26Q99JT2 416 aa16.47■□□□□ 0.23
Ccdc28b-201ENSMUST00000030586 Srpk2O54781 681 aaKnown RBP16.46■□□□□ 0.23
Ccdc28b-201ENSMUST00000030586 Utp14aQ640M1 767 aaKnown RBP16.44■□□□□ 0.22
Ccdc28b-201ENSMUST00000030586 Cps1Q8C196 1500 aa16.44■□□□□ 0.22
Ccdc28b-201ENSMUST00000030586 Cep170bQ80U49 1574 aa16.43■□□□□ 0.22
Ccdc28b-201ENSMUST00000030586 Cdk13Q69ZA1 1511 aaKnown RBP16.43■□□□□ 0.22
Ccdc28b-201ENSMUST00000030586 Gm20521D3Z5F7 333 aa16.42■□□□□ 0.22
Ccdc28b-201ENSMUST00000030586 Lrrc7Q80TE7 1490 aa16.42■□□□□ 0.22
Ccdc28b-201ENSMUST00000030586 Os9Q8K2C7 672 aa16.41■□□□□ 0.22
Ccdc28b-201ENSMUST00000030586 Polr3aB2RXC6 1390 aa16.4■□□□□ 0.22
Ccdc28b-201ENSMUST00000030586 Neurod1Q60867 357 aa16.4■□□□□ 0.22
Ccdc28b-201ENSMUST00000030586 GapdhsQ64467 440 aa16.39■□□□□ 0.21
Ccdc28b-201ENSMUST00000030586 Cep152A2AUM9 1736 aaKnown RBP16.38■□□□□ 0.21
Ccdc28b-201ENSMUST00000030586 Nwd1A6H603 1563 aa16.38■□□□□ 0.21
Ccdc28b-201ENSMUST00000030586 Cpsf1Q9EPU4 1441 aaKnown RBP16.36■□□□□ 0.21
Ccdc28b-201ENSMUST00000030586 Ift172Q6VH22 1749 aa16.36■□□□□ 0.21
Ccdc28b-201ENSMUST00000030586 Mug2P28666 1451 aa16.35■□□□□ 0.21
Ccdc28b-201ENSMUST00000030586 Unc13bQ9Z1N9 1602 aa16.35■□□□□ 0.21
Ccdc28b-201ENSMUST00000030586 Gm10563F6WIE4 79 aa16.35■□□□□ 0.21
Ccdc28b-201ENSMUST00000030586 Q3UJC8 639 aa16.35■□□□□ 0.21
Ccdc28b-201ENSMUST00000030586 Cdk5rap2Q8K389 1822 aa16.35■□□□□ 0.21
Ccdc28b-201ENSMUST00000030586 RalgapbQ8BQZ4 1484 aa16.35■□□□□ 0.21
Ccdc28b-201ENSMUST00000030586 Gimap5Q8BWF2 308 aa16.34■□□□□ 0.21
Ccdc28b-201ENSMUST00000030586 Usp40Q8BWR4 1235 aa16.34■□□□□ 0.21
Ccdc28b-201ENSMUST00000030586 Plekhg1F6S200 1446 aa16.34■□□□□ 0.21
Ccdc28b-201ENSMUST00000030586 Usp32F8VPZ3 1604 aa16.34■□□□□ 0.21
Ccdc28b-201ENSMUST00000030586 C3P01027 1663 aa16.34■□□□□ 0.21
Ccdc28b-201ENSMUST00000030586 Ttll13A4Q9F6 804 aa16.33■□□□□ 0.2
Ccdc28b-201ENSMUST00000030586 Tom1O88746 492 aa16.33■□□□□ 0.2
Ccdc28b-201ENSMUST00000030586 DnmbpQ6TXD4 1580 aa16.33■□□□□ 0.2
Ccdc28b-201ENSMUST00000030586 Itsn2Q9Z0R6 1659 aa16.33■□□□□ 0.2
Ccdc28b-201ENSMUST00000030586 NalcnQ8BXR5 1738 aa16.33■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms