RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Cd109Q8R422 1442 aa30,47■■■□□ 2,47
Ttc39b-201ENSMUST00000030205 PalldQ9ET54 1408 aa30,47■■■□□ 2,47
Ttc39b-201ENSMUST00000030205 Tarbp1E9Q368 1579 aa30,46■■■□□ 2,47
Ttc39b-201ENSMUST00000030205 Uggt1Q6P5E4 1551 aa30,46■■■□□ 2,47
Ttc39b-201ENSMUST00000030205 Iqgap3F8VQ29 1632 aa30,46■■■□□ 2,47
Ttc39b-201ENSMUST00000030205 Tom1O88746 492 aa30,45■■■□□ 2,47
Ttc39b-201ENSMUST00000030205 Ttll5Q8CHB8 1328 aa30,45■■■□□ 2,46
Ttc39b-201ENSMUST00000030205 PplQ9R269 1755 aa30,43■■■□□ 2,46
Ttc39b-201ENSMUST00000030205 Col18a1P39061 1774 aa30,43■■■□□ 2,46
Ttc39b-201ENSMUST00000030205 UbtfP25976 765 aaKnown RBP30,41■■■□□ 2,46
Ttc39b-201ENSMUST00000030205 Brinp3Q499E0 766 aa30,41■■■□□ 2,46
Ttc39b-201ENSMUST00000030205 Stk24Q99KH8 431 aa30,41■■■□□ 2,46
Ttc39b-201ENSMUST00000030205 Atp7aQ64430 1491 aa30,41■■■□□ 2,46
Ttc39b-201ENSMUST00000030205 Prrc2bQ7TPM1 1486 aaKnown RBP30,41■■■□□ 2,46
Ttc39b-201ENSMUST00000030205 Kif7B7ZNG0 1348 aa30,35■■■□□ 2,45
Ttc39b-201ENSMUST00000030205 Ankrd36D3Z4K0 1415 aa30,35■■■□□ 2,45
Ttc39b-201ENSMUST00000030205 PtprgQ05909 1442 aa30,35■■■□□ 2,45
Ttc39b-201ENSMUST00000030205 Ehbp1l1Q99MS7 1716 aa30,35■■■□□ 2,45
Ttc39b-201ENSMUST00000030205 Fbln2P37889 1221 aa30,33■■■□□ 2,45
Ttc39b-201ENSMUST00000030205 Asxl2Q8BZ32 1370 aa30,32■■■□□ 2,44
Ttc39b-201ENSMUST00000030205 Ube2uB1AUC4 352 aa30,32■■■□□ 2,44
Ttc39b-201ENSMUST00000030205 Gimap5Q8BWF2 308 aa30,31■■■□□ 2,44
Ttc39b-201ENSMUST00000030205 Mroh1E0CZ22 1640 aa30,31■■■□□ 2,44
Ttc39b-201ENSMUST00000030205 Trak1Q6PD31 939 aa30,3■■■□□ 2,44
Ttc39b-201ENSMUST00000030205 Tns3Q5SSZ5 1440 aa30,3■■■□□ 2,44
Ttc39b-201ENSMUST00000030205 Slit3Q9WVB4 1523 aa30,28■■■□□ 2,44
Ttc39b-201ENSMUST00000030205 Evi5lH3BKQ3 813 aa30,27■■■□□ 2,44
Ttc39b-201ENSMUST00000030205 Arap3Q8R5G7 1538 aa30,27■■■□□ 2,44
Ttc39b-201ENSMUST00000030205 Pik3c2aQ61194 1686 aa30,27■■■□□ 2,44
Ttc39b-201ENSMUST00000030205 Slain2Q8CI08 581 aa30,26■■■□□ 2,43
Ttc39b-201ENSMUST00000030205 Arhgef28P97433 1693 aa30,26■■■□□ 2,43
Ttc39b-201ENSMUST00000030205 Nyap1Q6PFX7 833 aa30,25■■■□□ 2,43
Ttc39b-201ENSMUST00000030205 Mia2Q91ZV0 1396 aa30,25■■■□□ 2,43
Ttc39b-201ENSMUST00000030205 Sall3Q62255 1320 aa30,24■■■□□ 2,43
Ttc39b-201ENSMUST00000030205 ErbinQ80TH2 1402 aa30,24■■■□□ 2,43
Ttc39b-201ENSMUST00000030205 Abca8aQ8K442 1620 aa30,22■■■□□ 2,43
Ttc39b-201ENSMUST00000030205 Pik3c2gO70167 1506 aa30,2■■■□□ 2,42
Ttc39b-201ENSMUST00000030205 Edc4Q3UJB9 1406 aaKnown RBP30,19■■■□□ 2,42
Ttc39b-201ENSMUST00000030205 AatkQ80YE4 1365 aa30,17■■■□□ 2,42
Ttc39b-201ENSMUST00000030205 Kif21bQ9QXL1 1668 aa30,16■■■□□ 2,42
Ttc39b-201ENSMUST00000030205 Ttll13A4Q9F6 804 aa30,15■■■□□ 2,42
Ttc39b-201ENSMUST00000030205 Cypt2Q6P924 180 aa30,14■■■□□ 2,42
Ttc39b-201ENSMUST00000030205 Slc5a4bQ91ZP4 660 aa30,13■■■□□ 2,41
Ttc39b-201ENSMUST00000030205 Slit2Q9R1B9 1521 aa30,12■■■□□ 2,41
Ttc39b-201ENSMUST00000030205 Atp1b4Q99ME6 356 aa30,11■■■□□ 2,41
Ttc39b-201ENSMUST00000030205 Rprd2Q6NXI6 1469 aaKnown RBP30,09■■■□□ 2,41
Ttc39b-201ENSMUST00000030205 Pik3r4Q8VD65 1358 aa30,06■■■□□ 2,4
Ttc39b-201ENSMUST00000030205 AU022751B1B0V2 589 aa30,06■■■□□ 2,4
Ttc39b-201ENSMUST00000030205 Qtrt2B8ZXI1 415 aa30,06■■■□□ 2,4
Ttc39b-201ENSMUST00000030205 Q9D9H8 365 aa30,05■■■□□ 2,4
Ttc39b-201ENSMUST00000030205 Unc13bQ9Z1N9 1602 aa30,04■■■□□ 2,4
Ttc39b-201ENSMUST00000030205 Tmem94Q7TSH8 1360 aa30,03■■■□□ 2,4
Ttc39b-201ENSMUST00000030205 Nwd1A6H603 1563 aa30,02■■■□□ 2,4
Ttc39b-201ENSMUST00000030205 Atf3Q60765 181 aa30,01■■■□□ 2,39
Ttc39b-201ENSMUST00000030205 Fnbp4Q6ZQ03 1031 aa30■■■□□ 2,39
Ttc39b-201ENSMUST00000030205 Myom1Q62234 1667 aaKnown RBP29,98■■■□□ 2,39
Ttc39b-201ENSMUST00000030205 Shq1Q7TMX5 569 aa29,97■■■□□ 2,39
Ttc39b-201ENSMUST00000030205 HnrnpmQ9D0E1 729 aaKnown RBP29,97■■■□□ 2,39
Ttc39b-201ENSMUST00000030205 Dhx9O70133 1380 aaKnown RBP29,96■■■□□ 2,39
Ttc39b-201ENSMUST00000030205 Sema6bO54951 886 aa29,96■■■□□ 2,39
Ttc39b-201ENSMUST00000030205 Dapk1Q80YE7 1442 aa29,96■■■□□ 2,39
Ttc39b-201ENSMUST00000030205 Adgrl1Q80TR1 1466 aa29,95■■■□□ 2,39
Ttc39b-201ENSMUST00000030205 Col14a1Q80X19 1797 aa29,95■■■□□ 2,38
Ttc39b-201ENSMUST00000030205 Mphosph9A6H5Y1 991 aa29,93■■■□□ 2,38
Ttc39b-201ENSMUST00000030205 Cntnap1O54991 1385 aa29,92■■■□□ 2,38
Ttc39b-201ENSMUST00000030205 Nhsl1Q8CAF4 1587 aa29,91■■■□□ 2,38
Ttc39b-201ENSMUST00000030205 Plxnc1Q9QZC2 1574 aa29,88■■■□□ 2,37
Ttc39b-201ENSMUST00000030205 PtprvP70289 1705 aa29,86■■■□□ 2,37
Ttc39b-201ENSMUST00000030205 Hdac5Q9Z2V6 1113 aa29,86■■■□□ 2,37
Ttc39b-201ENSMUST00000030205 NalcnQ8BXR5 1738 aa29,85■■■□□ 2,37
Ttc39b-201ENSMUST00000030205 KdrP35918 1367 aa29,84■■■□□ 2,37
Ttc39b-201ENSMUST00000030205 Ift172Q6VH22 1749 aa29,82■■■□□ 2,36
Ttc39b-201ENSMUST00000030205 Zfp142G5E869 1843 aa29,82■■■□□ 2,36
Ttc39b-201ENSMUST00000030205 Znf526Q8BI66 675 aa29,81■■■□□ 2,36
Ttc39b-201ENSMUST00000030205 Ybx3Q9JKB3 361 aaKnown RBP29,8■■■□□ 2,36
Ttc39b-201ENSMUST00000030205 Cps1Q8C196 1500 aa29,79■■■□□ 2,36
Ttc39b-201ENSMUST00000030205 MaddQ80U28 1577 aa29,78■■■□□ 2,36
Ttc39b-201ENSMUST00000030205 MypopQ8R4U1 393 aa29,78■■■□□ 2,36
Ttc39b-201ENSMUST00000030205 Siglec1Q62230 1695 aa29,78■■■□□ 2,36
Ttc39b-201ENSMUST00000030205 Mroh3A0A1D5RM54 893 aa29,77■■■□□ 2,36
Ttc39b-201ENSMUST00000030205 Dot1lQ6XZL8 1540 aa29,76■■■□□ 2,36
Ttc39b-201ENSMUST00000030205 C3P01027 1663 aa29,76■■■□□ 2,36
Ttc39b-201ENSMUST00000030205 Bcl2l12Q9D3J3 255 aa29,76■■■□□ 2,35
Ttc39b-201ENSMUST00000030205 NinlQ6ZQ12 1394 aa29,76■■■□□ 2,35
Ttc39b-201ENSMUST00000030205 Kif24Q6NWW5 1356 aa29,75■■■□□ 2,35
Ttc39b-201ENSMUST00000030205 Lrp6O88572 1613 aa29,74■■■□□ 2,35
Ttc39b-201ENSMUST00000030205 Ppip5k1A2ARP1 1436 aa29,73■■■□□ 2,35
Ttc39b-201ENSMUST00000030205 Itsn2Q9Z0R6 1659 aa29,72■■■□□ 2,35
Ttc39b-201ENSMUST00000030205 Pkd2O35245 966 aa29,72■■■□□ 2,35
Ttc39b-201ENSMUST00000030205 Ggt6Q6PDE7 497 aa29,72■■■□□ 2,35
Ttc39b-201ENSMUST00000030205 Dmrt2Q8BG36 561 aa29,71■■■□□ 2,35
Ttc39b-201ENSMUST00000030205 Rreb1Q3UH06 1700 aaKnown RBP29,69■■■□□ 2,34
Ttc39b-201ENSMUST00000030205 Pik3c2bE9QAN8 1632 aa29,69■■■□□ 2,34
Ttc39b-201ENSMUST00000030205 Kif20bQ80WE4 1774 aaKnown RBP29,67■■■□□ 2,34
Ttc39b-201ENSMUST00000030205 Gm10563F6WIE4 79 aa29,67■■■□□ 2,34
Ttc39b-201ENSMUST00000030205 Rims1Q99NE5 1463 aa29,67■■■□□ 2,34
Ttc39b-201ENSMUST00000030205 DccP70211 1447 aa29,66■■■□□ 2,34
Ttc39b-201ENSMUST00000030205 Washc2Q6PGL7 1334 aa29,66■■■□□ 2,34
Ttc39b-201ENSMUST00000030205 Ddx17Q501J6 650 aaKnown RBP29,65■■■□□ 2,34
Ttc39b-201ENSMUST00000030205 Utp14aQ640M1 767 aaKnown RBP29,62■■■□□ 2,33
Retrieved 100 of 22,080 RNA–protein pairs in 33,5 ms