RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Trim26Q99PN3 545 aa10.4□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Cul7Q8VE73 1689 aa10.4□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 1700123L14RikQ3V2K7 440 aa10.39□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Rsph4aQ8BYM7 716 aa10.39□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Apbb1Q9QXJ1 710 aa10.39□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Naip6Q9JIB6 1403 aa10.39□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 CrbnQ8C7D2 445 aa10.39□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Sox12Q04890 314 aa10.39□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Setbp1Q9Z180 1582 aa10.38□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Atp2b2Q9R0K7 1198 aa10.38□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Znf518aB2RRF6 1478 aaKnown RBP10.38□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 CenpjQ569L8 1344 aa10.38□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 AatkQ80YE4 1365 aa10.38□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Trpm2Q91YD4 1506 aa10.38□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 RalgapbQ8BQZ4 1484 aa10.38□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Mast1Q9R1L5 1570 aa10.37□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Nos1Q9Z0J4 1429 aa10.37□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Cdc42bpbQ7TT50 1713 aa10.37□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Cpsf1Q9EPU4 1441 aaKnown RBP10.37□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Mak16Q8BGS0 296 aaKnown RBP10.37□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Dnajc5gQ8C632 165 aa10.37□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Abcc6Q9R1S7 1498 aa10.36□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Dot1lQ6XZL8 1540 aa10.36□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Lamc1P02468 1607 aaKnown RBP10.36□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Tcerg1Q8CGF7 1100 aaKnown RBP10.36□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Birc3O08863 600 aa10.36□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Ppp4r2Q0VGB7 417 aa10.36□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Asxl2Q8BZ32 1370 aa10.36□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Plin1Q8CGN5 517 aa10.35□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Ak9G3UYQ4 1894 aa10.35□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Kif1bQ60575 1816 aaKnown RBP10.35□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Speer4f1Q9D5Q6 258 aa10.34□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Cfap65Q3V0B4 1847 aa10.34□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Kidins220E9Q9B7 1793 aa10.34□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 Ppp2r1aQ76MZ3 589 aa10.34□□□□□ -0.75
Ccdc39-201ENSMUST00000029222 U2af1Q9D883 239 aaKnown RBP10.33□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Senp3Q9EP97 568 aaKnown RBP10.33□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 AU022751B1B0V2 589 aa10.33□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Col17a1Q07563 1470 aa10.33□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Kiaa1210E9Q0C6 1637 aa10.32□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Gsto1O09131 240 aa10.31□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Slc4a3P16283 1227 aa10.31□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Aplp2Q06335 707 aa10.31□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 HnrnpmQ9D0E1 729 aaKnown RBP10.31□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Slc52a2Q9D8F3 450 aa10.31□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Golga2Q921M4 999 aa10.31□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Cdk19Q8BWD8 501 aa10.3□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Abca9Q8K449 1623 aa10.3□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Ppip5k1A2ARP1 1436 aa10.29□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Synj2Q9D2G5 1434 aa10.29□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 NpatQ8BMA5 1420 aa10.28□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Mbd5B1AYB6 1498 aa10.28□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Prrc2bQ7TPM1 1486 aaKnown RBP10.28□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Tsen2Q6P7W5 460 aa10.27□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Wdr43Q6ZQL4 677 aaKnown RBP10.27□□□□□ -0.76
Ccdc39-201ENSMUST00000029222 Tulp4Q9JIL5 1547 aa10.27□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Zfp444Q3TDV8 331 aaKnown RBP10.27□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 ShprhQ7TPQ3 1674 aa10.27□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Hecw1Q8K4P8 1604 aa10.27□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Pprc1Q6NZN1 1644 aa10.26□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Atp10aO54827 1508 aa10.26□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Anp32aO35381 247 aa10.26□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Abca6Q8K441 1624 aa10.26□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Hfm1D3Z4R1 1434 aa10.25□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Upf2A2AT37 1269 aaKnown RBP10.25□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Pcdh10E9PXQ7 1057 aa10.25□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 GsdmaQ9EST1 446 aa10.25□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Skint5A7XUY5 1461 aa10.25□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Mapk8ip3Q9ESN9 1337 aa10.25□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Neurl4Q5NCX5 1563 aa10.25□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Rab3gap2Q8BMG7 1366 aa10.25□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Dip2cE9PWR4 1557 aa10.25□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Pdcd11Q6NS46 1862 aaKnown RBP10.24□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Apaf1O88879 1249 aa10.24□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Talpid3E9PV87 1520 aa10.24□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 AnkarA2RT91 1465 aa10.23□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Adamts13Q769J6 1426 aa10.23□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Fndc1E9Q043 1732 aa10.23□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Irx6Q9ER75 438 aa10.22□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Xrn1P97789 1719 aaKnown RBP10.22□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 1700019A02RikA0A087WPV9 146 aa10.21□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Myo3aQ8K3H5 1613 aa10.21□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 L3mbtl2P59178 703 aa10.21□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Pip4k2bQ80XI4 416 aa10.21□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Kdm5cP41230 1554 aa10.21□□□□□ -0.77
Ccdc39-201ENSMUST00000029222 Uggt2E9Q4X2 1504 aa10.21□□□□□ -0.78
Ccdc39-201ENSMUST00000029222 Gm6268A2A3U9 297 aa10.2□□□□□ -0.78
Ccdc39-201ENSMUST00000029222 Kcnh8P59111 1102 aa10.2□□□□□ -0.78
Ccdc39-201ENSMUST00000029222 Efcab6Q6P1E8 1516 aa10.2□□□□□ -0.78
Ccdc39-201ENSMUST00000029222 Robo2Q7TPD3 1470 aa10.2□□□□□ -0.78
Ccdc39-201ENSMUST00000029222 Cald1E9QA15 768 aaKnown RBP10.2□□□□□ -0.78
Ccdc39-201ENSMUST00000029222 Ksr2Q3UVC0 959 aa10.19□□□□□ -0.78
Ccdc39-201ENSMUST00000029222 Cabp4Q8VHC5 271 aa10.19□□□□□ -0.78
Ccdc39-201ENSMUST00000029222 Rwdd1Q9CQK7 243 aa10.19□□□□□ -0.78
Ccdc39-201ENSMUST00000029222 Clasp1Q80TV8 1535 aaKnown RBP10.19□□□□□ -0.78
Ccdc39-201ENSMUST00000029222 Lrrc7Q80TE7 1490 aa10.19□□□□□ -0.78
Ccdc39-201ENSMUST00000029222 FanciQ8K368 1330 aa10.19□□□□□ -0.78
Ccdc39-201ENSMUST00000029222 Plch2A2AP18 1501 aa10.19□□□□□ -0.78
Ccdc39-201ENSMUST00000029222 Ap3b2Q9JME5 1082 aa10.19□□□□□ -0.78
Ccdc39-201ENSMUST00000029222 Kif21bQ9QXL1 1668 aa10.18□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms