RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 Bcl11aQ9QYE3 773 aa18.8■□□□□ 0.6
Rtf1-201ENSMUST00000028767 DekQ7TNV0 380 aaKnown RBP18.79■□□□□ 0.6
Rtf1-201ENSMUST00000028767 Atp10dQ8K2X1 1416 aa18.79■□□□□ 0.6
Rtf1-201ENSMUST00000028767 Ralbp1Q62172 648 aa18.79■□□□□ 0.6
Rtf1-201ENSMUST00000028767 MyclP10166 368 aa18.78■□□□□ 0.6
Rtf1-201ENSMUST00000028767 Pank1Q8K4K6 548 aa18.78■□□□□ 0.6
Rtf1-201ENSMUST00000028767 Mug2P28666 1451 aa18.78■□□□□ 0.6
Rtf1-201ENSMUST00000028767 Spryd3E9Q9B3 442 aa18.78■□□□□ 0.6
Rtf1-201ENSMUST00000028767 Ccar1Q8CH18 1146 aaKnown RBP18.77■□□□□ 0.6
Rtf1-201ENSMUST00000028767 Sox12Q04890 314 aa18.77■□□□□ 0.6
Rtf1-201ENSMUST00000028767 Q9D9H8 365 aa18.77■□□□□ 0.6
Rtf1-201ENSMUST00000028767 Ssh2Q5SW75 1423 aa18.77■□□□□ 0.59
Rtf1-201ENSMUST00000028767 Ttll13A4Q9F6 804 aa18.76■□□□□ 0.59
Rtf1-201ENSMUST00000028767 Adamts12Q811B3 1600 aa18.76■□□□□ 0.59
Rtf1-201ENSMUST00000028767 Ttc21bQ0HA38 1315 aa18.76■□□□□ 0.59
Rtf1-201ENSMUST00000028767 Apaf1O88879 1249 aa18.75■□□□□ 0.59
Rtf1-201ENSMUST00000028767 Ipo8Q7TMY7 1010 aa18.74■□□□□ 0.59
Rtf1-201ENSMUST00000028767 Iqcf3Q9D498 203 aa18.73■□□□□ 0.59
Rtf1-201ENSMUST00000028767 Pibf1E9Q6K3 756 aa18.73■□□□□ 0.59
Rtf1-201ENSMUST00000028767 Map7O88735 730 aa18.73■□□□□ 0.59
Rtf1-201ENSMUST00000028767 Ccdc60Q8C4J0 545 aa18.73■□□□□ 0.59
Rtf1-201ENSMUST00000028767 Cdk13Q69ZA1 1511 aaKnown RBP18.72■□□□□ 0.59
Rtf1-201ENSMUST00000028767 Gcc2Q8CHG3 1679 aa18.72■□□□□ 0.59
Rtf1-201ENSMUST00000028767 Arhgef12Q8R4H2 1543 aaKnown RBP18.72■□□□□ 0.59
Rtf1-201ENSMUST00000028767 Plekhh1Q80TI1 1356 aa18.71■□□□□ 0.59
Rtf1-201ENSMUST00000028767 Mfap1aC0HKD8 439 aaKnown RBP18.7■□□□□ 0.58
Rtf1-201ENSMUST00000028767 Mfap1bC0HKD9 439 aaKnown RBP18.7■□□□□ 0.58
Rtf1-201ENSMUST00000028767 AI481877A2ALV5 1481 aa18.7■□□□□ 0.58
Rtf1-201ENSMUST00000028767 Atp2b2Q9R0K7 1198 aa18.7■□□□□ 0.58
Rtf1-201ENSMUST00000028767 DroshaQ5HZJ0 1373 aaKnown RBP18.69■□□□□ 0.58
Rtf1-201ENSMUST00000028767 Igf1rQ60751 1373 aa18.69■□□□□ 0.58
Rtf1-201ENSMUST00000028767 Plcb2A3KGF7 1181 aa18.69■□□□□ 0.58
Rtf1-201ENSMUST00000028767 Htatsf1Q8BGC0 757 aa18.68■□□□□ 0.58
Rtf1-201ENSMUST00000028767 Ccdc9Q8VC31 543 aaKnown RBP18.68■□□□□ 0.58
Rtf1-201ENSMUST00000028767 Dennd4bQ3U1Y4 1499 aa18.68■□□□□ 0.58
Rtf1-201ENSMUST00000028767 RalgapbQ8BQZ4 1484 aa18.68■□□□□ 0.58
Rtf1-201ENSMUST00000028767 AlkP97793 1621 aa18.68■□□□□ 0.58
Rtf1-201ENSMUST00000028767 Arhgef11Q68FM7 1552 aa18.68■□□□□ 0.58
Rtf1-201ENSMUST00000028767 Trim58Q5NCC9 485 aa18.67■□□□□ 0.58
Rtf1-201ENSMUST00000028767 Kdm6bQ5NCY0 1641 aa18.66■□□□□ 0.58
Rtf1-201ENSMUST00000028767 Gsto1O09131 240 aa18.66■□□□□ 0.58
Rtf1-201ENSMUST00000028767 Naip6Q9JIB6 1403 aa18.65■□□□□ 0.58
Rtf1-201ENSMUST00000028767 Sart3Q9JLI8 962 aaKnown RBP18.65■□□□□ 0.58
Rtf1-201ENSMUST00000028767 Eif2s2Q99L45 331 aaKnown RBP18.64■□□□□ 0.57
Rtf1-201ENSMUST00000028767 Ak7Q9D2H2 614 aa18.64■□□□□ 0.57
Rtf1-201ENSMUST00000028767 Afap1Q80YS6 731 aa18.64■□□□□ 0.57
Rtf1-201ENSMUST00000028767 Mapkbp1Q6NS57 1503 aa18.64■□□□□ 0.57
Rtf1-201ENSMUST00000028767 KnstrnQ9D9Z1 312 aaKnown RBP18.63■□□□□ 0.57
Rtf1-201ENSMUST00000028767 Chmp4bQ9D8B3 224 aaKnown RBP18.62■□□□□ 0.57
Rtf1-201ENSMUST00000028767 G3bp1P97855 465 aaKnown RBP18.61■□□□□ 0.57
Rtf1-201ENSMUST00000028767 Nutm1Q8BHP2 1126 aa18.61■□□□□ 0.57
Rtf1-201ENSMUST00000028767 Rtf1A2AQ19 715 aaKnown RBP18.61■□□□□ 0.57
Rtf1-201ENSMUST00000028767 Nectin2P32507 530 aa18.61■□□□□ 0.57
Rtf1-201ENSMUST00000028767 GorabQ8BRM2 368 aa18.6■□□□□ 0.57
Rtf1-201ENSMUST00000028767 Ythdc2B2RR83 1445 aaKnown RBP18.6■□□□□ 0.57
Rtf1-201ENSMUST00000028767 Tnnt1O88346 262 aa18.6■□□□□ 0.57
Rtf1-201ENSMUST00000028767 Abca16E9PWJ7 1678 aa18.6■□□□□ 0.57
Rtf1-201ENSMUST00000028767 KarsQ99MN1 595 aaKnown RBP18.59■□□□□ 0.57
Rtf1-201ENSMUST00000028767 Atxn3Q9CVD2 355 aa18.59■□□□□ 0.57
Rtf1-201ENSMUST00000028767 Ylpm1Q9R0I7 1386 aaKnown RBP18.58■□□□□ 0.57
Rtf1-201ENSMUST00000028767 Tspyl2Q7TQI8 677 aa18.58■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Cpsf1Q9EPU4 1441 aaKnown RBP18.58■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Liat1Q810M6 228 aa18.58■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Rsph4aQ8BYM7 716 aa18.57■□□□□ 0.56
Rtf1-201ENSMUST00000028767 PtprgQ05909 1442 aa18.57■□□□□ 0.56
Rtf1-201ENSMUST00000028767 SphkapQ6NSW3 1687 aa18.56■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Zranb1Q7M760 708 aa18.56■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Cald1E9QA15 768 aaKnown RBP18.56■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Kank1E9Q238 1360 aa18.55■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Lrrc9Q8CDN9 1456 aa18.55■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Rbm25B2RY56 838 aaKnown RBP18.55■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Dusp27Q148W8 1138 aa18.55■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Stk31Q99MW1 1018 aa18.54■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Q3TQI7 289 aaKnown RBP18.54■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Cdk19Q8BWD8 501 aa18.53■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Abcc1O35379 1528 aa18.53■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Adgrl2Q8JZZ7 1487 aa18.53■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Cabp4Q8VHC5 271 aa18.53■□□□□ 0.56
Rtf1-201ENSMUST00000028767 HnrnpuQ8VEK3 800 aaKnown RBP18.52■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Ccdc146E9Q9F7 977 aa18.52■□□□□ 0.56
Rtf1-201ENSMUST00000028767 Rusc2Q80U22 1514 aa18.51■□□□□ 0.55
Rtf1-201ENSMUST00000028767 Ccdc183A2AJB1 534 aa18.5■□□□□ 0.55
Rtf1-201ENSMUST00000028767 Hsp90b1P08113 802 aaKnown RBP18.5■□□□□ 0.55
Rtf1-201ENSMUST00000028767 Kiaa1551Q5DTW7 1521 aa18.5■□□□□ 0.55
Rtf1-201ENSMUST00000028767 Lrriq1Q0P5X1 1673 aa18.49■□□□□ 0.55
Rtf1-201ENSMUST00000028767 Swt1Q9DBQ9 907 aa18.49■□□□□ 0.55
Rtf1-201ENSMUST00000028767 Pbrm1Q8BSQ9 1634 aaKnown RBP18.49■□□□□ 0.55
Rtf1-201ENSMUST00000028767 Irx3P81067 507 aa18.49■□□□□ 0.55
Rtf1-201ENSMUST00000028767 Abcc2Q8VI47 1543 aa18.48■□□□□ 0.55
Rtf1-201ENSMUST00000028767 Usp16Q99LG0 825 aa18.48■□□□□ 0.55
Rtf1-201ENSMUST00000028767 OvosQ3UU35 1456 aa18.48■□□□□ 0.55
Rtf1-201ENSMUST00000028767 Cc2d1aQ8K1A6 943 aa18.48■□□□□ 0.55
Rtf1-201ENSMUST00000028767 Slc52a2Q9D8F3 450 aa18.48■□□□□ 0.55
Rtf1-201ENSMUST00000028767 Cavin4A2AMM0 362 aa18.47■□□□□ 0.55
Rtf1-201ENSMUST00000028767 FanciQ8K368 1330 aa18.47■□□□□ 0.55
Rtf1-201ENSMUST00000028767 Zmym4A2A791 1549 aaKnown RBP18.46■□□□□ 0.55
Rtf1-201ENSMUST00000028767 Zfp777B9EKF4 885 aa18.46■□□□□ 0.55
Rtf1-201ENSMUST00000028767 Pprc1Q6NZN1 1644 aa18.45■□□□□ 0.54
Rtf1-201ENSMUST00000028767 Erbb3Q61526 1339 aa18.45■□□□□ 0.54
Rtf1-201ENSMUST00000028767 Cul7Q8VE73 1689 aa18.44■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 61 ms