RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Iqcf3Q9D498 203 aa21.41■■□□□ 1.02
Trim8-201ENSMUST00000026008 CanxP35564 591 aaKnown RBP21.41■■□□□ 1.02
Trim8-201ENSMUST00000026008 Dcaf11Q91VU6 549 aa21.41■■□□□ 1.02
Trim8-201ENSMUST00000026008 Kif3bQ61771 747 aa21.4■■□□□ 1.02
Trim8-201ENSMUST00000026008 Rab3gap2Q8BMG7 1366 aa21.4■■□□□ 1.02
Trim8-201ENSMUST00000026008 Kif7B7ZNG0 1348 aa21.4■■□□□ 1.02
Trim8-201ENSMUST00000026008 Cnga1P29974 684 aa21.4■■□□□ 1.02
Trim8-201ENSMUST00000026008 Ppip5k1A2ARP1 1436 aa21.39■■□□□ 1.02
Trim8-201ENSMUST00000026008 Hsp90aa1P07901 733 aaKnown RBP21.39■■□□□ 1.02
Trim8-201ENSMUST00000026008 Fan1Q69ZT1 1020 aa21.38■■□□□ 1.01
Trim8-201ENSMUST00000026008 Chmp5Q9D7S9 219 aa21.38■■□□□ 1.01
Trim8-201ENSMUST00000026008 DaxxO35613 739 aa21.37■■□□□ 1.01
Trim8-201ENSMUST00000026008 Tulp4Q9JIL5 1547 aa21.37■■□□□ 1.01
Trim8-201ENSMUST00000026008 Mast1Q9R1L5 1570 aa21.37■■□□□ 1.01
Trim8-201ENSMUST00000026008 Hdac5Q9Z2V6 1113 aa21.37■■□□□ 1.01
Trim8-201ENSMUST00000026008 Rnf17Q99MV7 1640 aa21.36■■□□□ 1.01
Trim8-201ENSMUST00000026008 Gtf2e1Q9D0D5 440 aa21.36■■□□□ 1.01
Trim8-201ENSMUST00000026008 Gm16486A0A1D5RMD1 1434 aa21.36■■□□□ 1.01
Trim8-201ENSMUST00000026008 TnikP83510 1323 aa21.36■■□□□ 1.01
Trim8-201ENSMUST00000026008 Mbd3Q9Z2D8 285 aaKnown RBP21.36■■□□□ 1.01
Trim8-201ENSMUST00000026008 Nsd2Q8BVE8 1365 aa21.35■■□□□ 1.01
Trim8-201ENSMUST00000026008 Arid4bA2CG63 1314 aaKnown RBP21.35■■□□□ 1.01
Trim8-201ENSMUST00000026008 Srpk2O54781 681 aaKnown RBP21.34■■□□□ 1.01
Trim8-201ENSMUST00000026008 Ythdc2B2RR83 1445 aaKnown RBP21.34■■□□□ 1.01
Trim8-201ENSMUST00000026008 Cdc42bpbQ7TT50 1713 aa21.34■■□□□ 1.01
Trim8-201ENSMUST00000026008 Cfap74Q3UY96 1578 aa21.33■■□□□ 1.01
Trim8-201ENSMUST00000026008 Ccdc30Q8BVF4 654 aa21.33■■□□□ 1.01
Trim8-201ENSMUST00000026008 Usp40Q8BWR4 1235 aa21.33■■□□□ 1.01
Trim8-201ENSMUST00000026008 EspnQ9ET47 871 aa21.33■■□□□ 1
Trim8-201ENSMUST00000026008 Sbno1Q689Z5 1390 aa21.32■■□□□ 1
Trim8-201ENSMUST00000026008 Plekhh1Q80TI1 1356 aa21.32■■□□□ 1
Trim8-201ENSMUST00000026008 Cep170Q6A065 1588 aa21.32■■□□□ 1
Trim8-201ENSMUST00000026008 4933416C03RikQ3V063 378 aa21.31■■□□□ 1
Trim8-201ENSMUST00000026008 Kdm2bQ6P1G2 1309 aa21.3■■□□□ 1
Trim8-201ENSMUST00000026008 Abcc6Q9R1S7 1498 aa21.29■■□□□ 1
Trim8-201ENSMUST00000026008 Chd1P40201 1711 aa21.29■■□□□ 1
Trim8-201ENSMUST00000026008 Usp54Q8BL06 1588 aaKnown RBP21.29■■□□□ 1
Trim8-201ENSMUST00000026008 Golga2Q921M4 999 aa21.29■■□□□ 1
Trim8-201ENSMUST00000026008 Sart3Q9JLI8 962 aaKnown RBP21.28■■□□□ 1
Trim8-201ENSMUST00000026008 Tspyl2Q7TQI8 677 aa21.27■■□□□ 1
Trim8-201ENSMUST00000026008 Polr3glQ8R0C0 218 aa21.27■■□□□ 1
Trim8-201ENSMUST00000026008 4930567H17RikQ3V0K5 233 aa21.26■□□□□ 0.99
Trim8-201ENSMUST00000026008 Gas2l2Q5SSG4 860 aa21.26■□□□□ 0.99
Trim8-201ENSMUST00000026008 Abcc3B2RX12 1523 aa21.26■□□□□ 0.99
Trim8-201ENSMUST00000026008 Robo2Q7TPD3 1470 aa21.26■□□□□ 0.99
Trim8-201ENSMUST00000026008 Trim30dE9PWL0 497 aa21.25■□□□□ 0.99
Trim8-201ENSMUST00000026008 Nkx1-2P42580 305 aa21.25■□□□□ 0.99
Trim8-201ENSMUST00000026008 Pdcd11Q6NS46 1862 aaKnown RBP21.25■□□□□ 0.99
Trim8-201ENSMUST00000026008 Kif1bQ60575 1816 aaKnown RBP21.25■□□□□ 0.99
Trim8-201ENSMUST00000026008 NudcO35685 332 aaKnown RBP21.24■□□□□ 0.99
Trim8-201ENSMUST00000026008 ArxO35085 564 aa21.24■□□□□ 0.99
Trim8-201ENSMUST00000026008 NhsB1AV60 1647 aa21.24■□□□□ 0.99
Trim8-201ENSMUST00000026008 Lemd3Q9WU40 921 aa21.23■□□□□ 0.99
Trim8-201ENSMUST00000026008 Neurl4Q5NCX5 1563 aa21.23■□□□□ 0.99
Trim8-201ENSMUST00000026008 Atf7ipQ7TT18 1306 aa21.23■□□□□ 0.99
Trim8-201ENSMUST00000026008 ShprhQ7TPQ3 1674 aa21.22■□□□□ 0.99
Trim8-201ENSMUST00000026008 Trim26Q99PN3 545 aa21.22■□□□□ 0.99
Trim8-201ENSMUST00000026008 ErbinQ80TH2 1402 aa21.22■□□□□ 0.99
Trim8-201ENSMUST00000026008 Pank1Q8K4K6 548 aa21.21■□□□□ 0.99
Trim8-201ENSMUST00000026008 Ttc21bQ0HA38 1315 aa21.21■□□□□ 0.99
Trim8-201ENSMUST00000026008 Ttc41Q692V3 1318 aa21.21■□□□□ 0.99
Trim8-201ENSMUST00000026008 Dnai1Q8C0M8 701 aa21.21■□□□□ 0.99
Trim8-201ENSMUST00000026008 Usp19Q3UJD6 1360 aa21.21■□□□□ 0.99
Trim8-201ENSMUST00000026008 Armcx1Q9CX83 456 aa21.21■□□□□ 0.99
Trim8-201ENSMUST00000026008 PtprtQ99M80 1454 aa21.2■□□□□ 0.98
Trim8-201ENSMUST00000026008 Ylpm1Q9R0I7 1386 aaKnown RBP21.2■□□□□ 0.98
Trim8-201ENSMUST00000026008 Hecw1Q8K4P8 1604 aa21.2■□□□□ 0.98
Trim8-201ENSMUST00000026008 Smc5Q8CG46 1101 aaKnown RBP21.19■□□□□ 0.98
Trim8-201ENSMUST00000026008 Atxn3Q9CVD2 355 aa21.17■□□□□ 0.98
Trim8-201ENSMUST00000026008 Col17a1Q07563 1470 aa21.16■□□□□ 0.98
Trim8-201ENSMUST00000026008 Igf1rQ60751 1373 aa21.16■□□□□ 0.98
Trim8-201ENSMUST00000026008 Eif2s2Q99L45 331 aaKnown RBP21.15■□□□□ 0.98
Trim8-201ENSMUST00000026008 Puf60Q3UEB3 564 aaKnown RBP21.15■□□□□ 0.98
Trim8-201ENSMUST00000026008 Pola1P33609 1465 aa21.14■□□□□ 0.98
Trim8-201ENSMUST00000026008 Stag3O70576 1240 aa21.14■□□□□ 0.98
Trim8-201ENSMUST00000026008 Abca8bQ8K440 1620 aa21.14■□□□□ 0.97
Trim8-201ENSMUST00000026008 Ak7Q9D2H2 614 aa21.14■□□□□ 0.97
Trim8-201ENSMUST00000026008 Kiaa1107Q80TK0 1369 aa21.13■□□□□ 0.97
Trim8-201ENSMUST00000026008 Hsp90ab1P11499 724 aaKnown RBP21.13■□□□□ 0.97
Trim8-201ENSMUST00000026008 Uspl1Q3ULM6 1089 aa21.12■□□□□ 0.97
Trim8-201ENSMUST00000026008 Kidins220E9Q9B7 1793 aa21.12■□□□□ 0.97
Trim8-201ENSMUST00000026008 Clasp1Q80TV8 1535 aaKnown RBP21.12■□□□□ 0.97
Trim8-201ENSMUST00000026008 Ppm1gQ61074 542 aa21.12■□□□□ 0.97
Trim8-201ENSMUST00000026008 Ccdc9Q8VC31 543 aaKnown RBP21.12■□□□□ 0.97
Trim8-201ENSMUST00000026008 Mapk8ip3Q9ESN9 1337 aa21.11■□□□□ 0.97
Trim8-201ENSMUST00000026008 Ralbp1Q62172 648 aa21.11■□□□□ 0.97
Trim8-201ENSMUST00000026008 Rangap1P46061 589 aaKnown RBP21.1■□□□□ 0.97
Trim8-201ENSMUST00000026008 Stard8Q8K031 1019 aa21.1■□□□□ 0.97
Trim8-201ENSMUST00000026008 Pabpn1Q8CCS6 302 aaKnown RBP21.1■□□□□ 0.97
Trim8-201ENSMUST00000026008 Myo3aQ8K3H5 1613 aa21.09■□□□□ 0.97
Trim8-201ENSMUST00000026008 Xrn1P97789 1719 aaKnown RBP21.08■□□□□ 0.97
Trim8-201ENSMUST00000026008 AatkQ80YE4 1365 aa21.08■□□□□ 0.97
Trim8-201ENSMUST00000026008 Apaf1O88879 1249 aa21.08■□□□□ 0.96
Trim8-201ENSMUST00000026008 Ipo8Q7TMY7 1010 aa21.08■□□□□ 0.96
Trim8-201ENSMUST00000026008 Uggt2E9Q4X2 1504 aa21.08■□□□□ 0.96
Trim8-201ENSMUST00000026008 Kdm5aQ3UXZ9 1690 aa21.07■□□□□ 0.96
Trim8-201ENSMUST00000026008 GsdmaQ9EST1 446 aa21.07■□□□□ 0.96
Trim8-201ENSMUST00000026008 AnkarA2RT91 1465 aa21.07■□□□□ 0.96
Trim8-201ENSMUST00000026008 Irx3P81067 507 aa21.06■□□□□ 0.96
Trim8-201ENSMUST00000026008 Ecm2Q5FW85 670 aa21.06■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 65.7 ms