RNA–Protein interactions for RNA: ENSMUST00000024620.6

Chd1-201, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Chd1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-201ENSMUST00000024620 Fhod3Q76LL6 1578 aa12.52□□□□□ -0.41
Chd1-201ENSMUST00000024620 OptnQ8K3K8 584 aa12.52□□□□□ -0.41
Chd1-201ENSMUST00000024620 Znf704Q9ERQ3 566 aa12.52□□□□□ -0.41
Chd1-201ENSMUST00000024620 Mrvi1Q9WUX5 899 aaKnown RBP12.52□□□□□ -0.41
Chd1-201ENSMUST00000024620 Ccdc38Q8CDN8 563 aa12.51□□□□□ -0.41
Chd1-201ENSMUST00000024620 Cul7Q8VE73 1689 aa12.51□□□□□ -0.41
Chd1-201ENSMUST00000024620 Map7d2A2AG50 781 aa12.51□□□□□ -0.41
Chd1-201ENSMUST00000024620 Disp1Q3TDN0 1521 aa12.51□□□□□ -0.41
Chd1-201ENSMUST00000024620 Esx1O88933 382 aa12.5□□□□□ -0.41
Chd1-201ENSMUST00000024620 Mapk8ip3Q9ESN9 1337 aa12.5□□□□□ -0.41
Chd1-201ENSMUST00000024620 Klhl34A2AI76 644 aa12.5□□□□□ -0.41
Chd1-201ENSMUST00000024620 C1qtnf12Q8R2Z0 308 aa12.5□□□□□ -0.41
Chd1-201ENSMUST00000024620 Plekhg3Q4VAC9 1341 aa12.5□□□□□ -0.41
Chd1-201ENSMUST00000024620 Erbb3Q61526 1339 aa12.5□□□□□ -0.41
Chd1-201ENSMUST00000024620 Cdca7Q9D0M2 382 aa12.49□□□□□ -0.41
Chd1-201ENSMUST00000024620 Rock2P70336 1388 aa12.49□□□□□ -0.41
Chd1-201ENSMUST00000024620 Wdr78E9PYY5 807 aa12.49□□□□□ -0.41
Chd1-201ENSMUST00000024620 Exoc6Q8R313 802 aa12.49□□□□□ -0.41
Chd1-201ENSMUST00000024620 Trap1aP19473 224 aa12.48□□□□□ -0.41
Chd1-201ENSMUST00000024620 Kif24Q6NWW5 1356 aa12.48□□□□□ -0.41
Chd1-201ENSMUST00000024620 Mtus2Q3UHD3 1353 aa12.47□□□□□ -0.41
Chd1-201ENSMUST00000024620 NcapgE9PWG6 1004 aa12.47□□□□□ -0.41
Chd1-201ENSMUST00000024620 Ccdc69Q3TCJ8 202 aa12.47□□□□□ -0.41
Chd1-201ENSMUST00000024620 Zc3h4Q6ZPZ3 1304 aaKnown RBP12.47□□□□□ -0.41
Chd1-201ENSMUST00000024620 Smarca4Q3TKT4 1613 aaKnown RBP12.46□□□□□ -0.42
Chd1-201ENSMUST00000024620 Setd5Q5XJV7 1441 aa12.46□□□□□ -0.42
Chd1-201ENSMUST00000024620 Dhx29Q6PGC1 1365 aaKnown RBP12.46□□□□□ -0.42
Chd1-201ENSMUST00000024620 Iqgap2Q3UQ44 1575 aa12.45□□□□□ -0.42
Chd1-201ENSMUST00000024620 Kif3aP28741 701 aa12.45□□□□□ -0.42
Chd1-201ENSMUST00000024620 Skida1Q80YR3 822 aa12.45□□□□□ -0.42
Chd1-201ENSMUST00000024620 Gm14025A2AP89 1413 aa12.45□□□□□ -0.42
Chd1-201ENSMUST00000024620 Plekhg5Q66T02 1073 aa12.45□□□□□ -0.42
Chd1-201ENSMUST00000024620 Gripap1Q8VD04 806 aa12.45□□□□□ -0.42
Chd1-201ENSMUST00000024620 Eif2s2Q99L45 331 aaKnown RBP12.45□□□□□ -0.42
Chd1-201ENSMUST00000024620 PtmsQ9D0J8 101 aaKnown RBP12.45□□□□□ -0.42
Chd1-201ENSMUST00000024620 Zmym4A2A791 1549 aaKnown RBP12.45□□□□□ -0.42
Chd1-201ENSMUST00000024620 Zhx1P70121 873 aa12.44□□□□□ -0.42
Chd1-201ENSMUST00000024620 Irf6P97431 467 aa12.44□□□□□ -0.42
Chd1-201ENSMUST00000024620 Arhgef12Q8R4H2 1543 aaKnown RBP12.44□□□□□ -0.42
Chd1-201ENSMUST00000024620 Vps8Q0P5W1 1427 aa12.44□□□□□ -0.42
Chd1-201ENSMUST00000024620 Sptbn5F6UCX4 1208 aa12.44□□□□□ -0.42
Chd1-201ENSMUST00000024620 Crocc2F6XLV1 1638 aa12.44□□□□□ -0.42
Chd1-201ENSMUST00000024620 Smc5Q8CG46 1101 aaKnown RBP12.43□□□□□ -0.42
Chd1-201ENSMUST00000024620 Senp3Q9EP97 568 aaKnown RBP12.43□□□□□ -0.42
Chd1-201ENSMUST00000024620 Ica1lQ3TY65 431 aa12.42□□□□□ -0.42
Chd1-201ENSMUST00000024620 Wwc2Q6NXJ0 1187 aa12.42□□□□□ -0.42
Chd1-201ENSMUST00000024620 Prdm4Q80V63 803 aa12.42□□□□□ -0.42
Chd1-201ENSMUST00000024620 Pabpn1Q8CCS6 302 aaKnown RBP12.42□□□□□ -0.42
Chd1-201ENSMUST00000024620 Hsp90ab1P11499 724 aaKnown RBP12.41□□□□□ -0.42
Chd1-201ENSMUST00000024620 Tshz1Q5DTH5 1084 aa12.41□□□□□ -0.42
Chd1-201ENSMUST00000024620 Fam13bQ8K2H3 851 aa12.4□□□□□ -0.42
Chd1-201ENSMUST00000024620 Ubl4bQ9CQ84 188 aa12.4□□□□□ -0.42
Chd1-201ENSMUST00000024620 Lamc1P02468 1607 aaKnown RBP12.4□□□□□ -0.42
Chd1-201ENSMUST00000024620 Grpel1Q99LP6 217 aa12.4□□□□□ -0.42
Chd1-201ENSMUST00000024620 Chmp5Q9D7S9 219 aa12.4□□□□□ -0.42
Chd1-201ENSMUST00000024620 MsnP26041 577 aaKnown RBP12.4□□□□□ -0.42
Chd1-201ENSMUST00000024620 Ggt6Q6PDE7 497 aa12.4□□□□□ -0.42
Chd1-201ENSMUST00000024620 Ssh1Q76I79 1042 aa12.4□□□□□ -0.42
Chd1-201ENSMUST00000024620 Tiam1Q60610 1591 aa12.4□□□□□ -0.43
Chd1-201ENSMUST00000024620 Map7O88735 730 aa12.39□□□□□ -0.43
Chd1-201ENSMUST00000024620 Bms1Q6PGF5 1284 aaKnown RBP12.39□□□□□ -0.43
Chd1-201ENSMUST00000024620 Arap1Q4LDD4 1452 aa12.39□□□□□ -0.43
Chd1-201ENSMUST00000024620 1700122O11RikJ3QPW6 241 aa12.38□□□□□ -0.43
Chd1-201ENSMUST00000024620 Ak7Q9D2H2 614 aa12.38□□□□□ -0.43
Chd1-201ENSMUST00000024620 LrpprcQ6PB66 1392 aaKnown RBP12.38□□□□□ -0.43
Chd1-201ENSMUST00000024620 Dync1i1O88485 628 aa12.38□□□□□ -0.43
Chd1-201ENSMUST00000024620 Hspa5P20029 655 aaKnown RBP12.38□□□□□ -0.43
Chd1-201ENSMUST00000024620 GscQ02591 256 aa12.38□□□□□ -0.43
Chd1-201ENSMUST00000024620 Slc20a2Q80UP8 656 aa12.37□□□□□ -0.43
Chd1-201ENSMUST00000024620 Fmn1Q05860 1466 aa12.37□□□□□ -0.43
Chd1-201ENSMUST00000024620 Kif21bQ9QXL1 1668 aa12.37□□□□□ -0.43
Chd1-201ENSMUST00000024620 SynmQ70IV5 1561 aa12.37□□□□□ -0.43
Chd1-201ENSMUST00000024620 Pnma3Q8JZW8 466 aa12.36□□□□□ -0.43
Chd1-201ENSMUST00000024620 Glipr1l2Q9CQ35 332 aa12.36□□□□□ -0.43
Chd1-201ENSMUST00000024620 MycnP03966 462 aaKnown RBP12.36□□□□□ -0.43
Chd1-201ENSMUST00000024620 Dnajc2P54103 621 aaKnown RBP12.36□□□□□ -0.43
Chd1-201ENSMUST00000024620 Vps37dQ810I0 261 aa12.36□□□□□ -0.43
Chd1-201ENSMUST00000024620 Ccdc183A2AJB1 534 aa12.36□□□□□ -0.43
Chd1-201ENSMUST00000024620 Spryd3E9Q9B3 442 aa12.36□□□□□ -0.43
Chd1-201ENSMUST00000024620 Tmx4Q8C0L0 335 aa12.36□□□□□ -0.43
Chd1-201ENSMUST00000024620 Psen1P49769 467 aa12.35□□□□□ -0.43
Chd1-201ENSMUST00000024620 Gzf1Q4VBD9 706 aa12.35□□□□□ -0.43
Chd1-201ENSMUST00000024620 Rabep1O35551 862 aa12.35□□□□□ -0.43
Chd1-201ENSMUST00000024620 Ppm1eQ80TL0 749 aa12.35□□□□□ -0.43
Chd1-201ENSMUST00000024620 IqubQ8CDK3 788 aa12.34□□□□□ -0.43
Chd1-201ENSMUST00000024620 AdnpQ9Z103 1108 aaKnown RBP12.34□□□□□ -0.43
Chd1-201ENSMUST00000024620 MpndQ3TV65 487 aa12.34□□□□□ -0.43
Chd1-201ENSMUST00000024620 Tbc1d31Q6NXY1 996 aa12.34□□□□□ -0.43
Chd1-201ENSMUST00000024620 Fnbp4Q6ZQ03 1031 aa12.34□□□□□ -0.43
Chd1-201ENSMUST00000024620 Arhgap35Q91YM2 1499 aa12.33□□□□□ -0.44
Chd1-201ENSMUST00000024620 Kcnj4P52189 445 aa12.33□□□□□ -0.44
Chd1-201ENSMUST00000024620 SlkO54988 1233 aa12.33□□□□□ -0.44
Chd1-201ENSMUST00000024620 Chaf1aQ9QWF0 911 aa12.32□□□□□ -0.44
Chd1-201ENSMUST00000024620 Kif27Q7M6Z4 1394 aa12.32□□□□□ -0.44
Chd1-201ENSMUST00000024620 Cbx1P83917 185 aaKnown RBP12.32□□□□□ -0.44
Chd1-201ENSMUST00000024620 Chmp4cQ9D7F7 232 aa12.32□□□□□ -0.44
Chd1-201ENSMUST00000024620 Cpsf1Q9EPU4 1441 aaKnown RBP12.31□□□□□ -0.44
Chd1-201ENSMUST00000024620 Mctp2Q5RJH2 878 aa12.31□□□□□ -0.44
Chd1-201ENSMUST00000024620 Gm6268A2A3U9 297 aa12.31□□□□□ -0.44
Chd1-201ENSMUST00000024620 Atp2b3Q0VF55 1220 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms