RNA–Protein interactions for RNA: ENSMUST00000004949.7

Traf6-201, Transcript of TNF receptor-associated factor 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf6, Length 6,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6-201ENSMUST00000004949 Fam163aQ8CAA5 168 aa16.44■□□□□ 0.22
Traf6-201ENSMUST00000004949 Ddx54Q8K4L0 874 aaKnown RBP16.43■□□□□ 0.22
Traf6-201ENSMUST00000004949 Pde3bQ61409 1100 aa16.42■□□□□ 0.22
Traf6-201ENSMUST00000004949 MpripP97434 1024 aa16.42■□□□□ 0.22
Traf6-201ENSMUST00000004949 CrebrfQ8CDG5 640 aaKnown RBP16.42■□□□□ 0.22
Traf6-201ENSMUST00000004949 Eif2s2Q99L45 331 aaKnown RBP16.41■□□□□ 0.22
Traf6-201ENSMUST00000004949 ChgaP26339 463 aaKnown RBP16.41■□□□□ 0.22
Traf6-201ENSMUST00000004949 HnrnpmQ9D0E1 729 aaKnown RBP16.41■□□□□ 0.22
Traf6-201ENSMUST00000004949 Zranb3Q6NZP1 1069 aa16.4■□□□□ 0.22
Traf6-201ENSMUST00000004949 Ccdc30Q8BVF4 654 aa16.4■□□□□ 0.22
Traf6-201ENSMUST00000004949 Cdk19Q8BWD8 501 aa16.4■□□□□ 0.22
Traf6-201ENSMUST00000004949 Tiam1Q60610 1591 aa16.4■□□□□ 0.22
Traf6-201ENSMUST00000004949 Ncapd3Q6ZQK0 1506 aa16.39■□□□□ 0.22
Traf6-201ENSMUST00000004949 BcanQ61361 883 aa16.39■□□□□ 0.22
Traf6-201ENSMUST00000004949 Ralbp1Q62172 648 aa16.39■□□□□ 0.22
Traf6-201ENSMUST00000004949 TchhA0A0B4J1F9 1599 aa16.39■□□□□ 0.21
Traf6-201ENSMUST00000004949 Nolc1E9Q5C9 702 aaKnown RBP16.39■□□□□ 0.21
Traf6-201ENSMUST00000004949 Zpr1Q62384 459 aa16.39■□□□□ 0.21
Traf6-201ENSMUST00000004949 FanciQ8K368 1330 aa16.39■□□□□ 0.21
Traf6-201ENSMUST00000004949 Apaf1O88879 1249 aa16.39■□□□□ 0.21
Traf6-201ENSMUST00000004949 Top2bQ64511 1612 aa16.39■□□□□ 0.21
Traf6-201ENSMUST00000004949 Ric3Q8BPM6 367 aa16.38■□□□□ 0.21
Traf6-201ENSMUST00000004949 Rbm25B2RY56 838 aaKnown RBP16.37■□□□□ 0.21
Traf6-201ENSMUST00000004949 A2mQ6GQT1 1474 aa16.37■□□□□ 0.21
Traf6-201ENSMUST00000004949 Pank1Q8K4K6 548 aa16.37■□□□□ 0.21
Traf6-201ENSMUST00000004949 NexmifQ5DTT1 1515 aa16.37■□□□□ 0.21
Traf6-201ENSMUST00000004949 Sall3Q62255 1320 aa16.37■□□□□ 0.21
Traf6-201ENSMUST00000004949 Sf3b2Q3UJB0 878 aaKnown RBP16.37■□□□□ 0.21
Traf6-201ENSMUST00000004949 Myom3A2ABU4 1439 aa16.36■□□□□ 0.21
Traf6-201ENSMUST00000004949 Grin2aP35436 1464 aa16.36■□□□□ 0.21
Traf6-201ENSMUST00000004949 Rab11fip3Q8CHD8 1047 aa16.36■□□□□ 0.21
Traf6-201ENSMUST00000004949 Swt1Q9DBQ9 907 aa16.36■□□□□ 0.21
Traf6-201ENSMUST00000004949 SynmQ70IV5 1561 aa16.36■□□□□ 0.21
Traf6-201ENSMUST00000004949 Ppp2r1aQ76MZ3 589 aa16.35■□□□□ 0.21
Traf6-201ENSMUST00000004949 Mug1P28665 1476 aa16.35■□□□□ 0.21
Traf6-201ENSMUST00000004949 Gsdma3Q5Y4Y6 464 aa16.35■□□□□ 0.21
Traf6-201ENSMUST00000004949 Neurod6P48986 337 aa16.35■□□□□ 0.21
Traf6-201ENSMUST00000004949 Mical1Q8VDP3 1048 aa16.34■□□□□ 0.21
Traf6-201ENSMUST00000004949 Cyb5rlB1AS42 316 aa16.33■□□□□ 0.21
Traf6-201ENSMUST00000004949 Cfdp1O88271 295 aaKnown RBP16.33■□□□□ 0.21
Traf6-201ENSMUST00000004949 Smc4Q8CG47 1286 aa16.33■□□□□ 0.2
Traf6-201ENSMUST00000004949 Erich6bQ9D4S6 220 aa16.33■□□□□ 0.2
Traf6-201ENSMUST00000004949 Chmp4cQ9D7F7 232 aa16.33■□□□□ 0.2
Traf6-201ENSMUST00000004949 Magi1Q6RHR9 1471 aa16.33■□□□□ 0.2
Traf6-201ENSMUST00000004949 Pcf11G3X9Z4 1553 aa16.33■□□□□ 0.2
Traf6-201ENSMUST00000004949 PnisrA2AJT4 805 aaKnown RBP16.32■□□□□ 0.2
Traf6-201ENSMUST00000004949 Gm21698A0A087WQP8 267 aa16.32■□□□□ 0.2
Traf6-201ENSMUST00000004949 Gnai1B2RSH2 354 aa16.32■□□□□ 0.2
Traf6-201ENSMUST00000004949 Gm21671G3UY31 267 aa16.32■□□□□ 0.2
Traf6-201ENSMUST00000004949 Gnai3Q9DC51 354 aa16.32■□□□□ 0.2
Traf6-201ENSMUST00000004949 Lamc3Q9R0B6 1581 aa16.32■□□□□ 0.2
Traf6-201ENSMUST00000004949 Il16O54824 1322 aa16.32■□□□□ 0.2
Traf6-201ENSMUST00000004949 Dennd6aQ8BH65 605 aa16.31■□□□□ 0.2
Traf6-201ENSMUST00000004949 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.31■□□□□ 0.2
Traf6-201ENSMUST00000004949 Cabp2Q9JLK4 216 aa16.31■□□□□ 0.2
Traf6-201ENSMUST00000004949 Ipo9Q91YE6 1041 aa16.3■□□□□ 0.2
Traf6-201ENSMUST00000004949 Sv2bQ8BG39 683 aa16.3■□□□□ 0.2
Traf6-201ENSMUST00000004949 Ccdc9Q8VC31 543 aaKnown RBP16.29■□□□□ 0.2
Traf6-201ENSMUST00000004949 Trim58Q5NCC9 485 aa16.29■□□□□ 0.2
Traf6-201ENSMUST00000004949 Tceal9Q9DD24 104 aa16.29■□□□□ 0.2
Traf6-201ENSMUST00000004949 Ylpm1Q9R0I7 1386 aaKnown RBP16.29■□□□□ 0.2
Traf6-201ENSMUST00000004949 Eva1cP58659 440 aa16.29■□□□□ 0.2
Traf6-201ENSMUST00000004949 Q8C5K5 320 aa16.29■□□□□ 0.2
Traf6-201ENSMUST00000004949 Slc4a2P13808 1237 aaKnown RBP16.28■□□□□ 0.2
Traf6-201ENSMUST00000004949 Tomm22Q9CPQ3 142 aa16.28■□□□□ 0.2
Traf6-201ENSMUST00000004949 Dhx16G3X8X0 1044 aaKnown RBP16.28■□□□□ 0.2
Traf6-201ENSMUST00000004949 Fkbp4P30416 458 aa16.28■□□□□ 0.2
Traf6-201ENSMUST00000004949 Kif16bB1AVY7 1312 aa16.28■□□□□ 0.2
Traf6-201ENSMUST00000004949 Mphosph10Q810V0 681 aaKnown RBP16.27■□□□□ 0.2
Traf6-201ENSMUST00000004949 Cgnl1Q6AW69 1298 aa16.27■□□□□ 0.2
Traf6-201ENSMUST00000004949 Dnttip2Q8R2M2 758 aaKnown RBP16.27■□□□□ 0.2
Traf6-201ENSMUST00000004949 Igf1rQ60751 1373 aa16.27■□□□□ 0.19
Traf6-201ENSMUST00000004949 Sytl4Q9R0Q1 673 aa16.27■□□□□ 0.19
Traf6-201ENSMUST00000004949 Cnnm1Q0GA42 951 aa16.26■□□□□ 0.19
Traf6-201ENSMUST00000004949 Abcc5Q9R1X5 1436 aa16.26■□□□□ 0.19
Traf6-201ENSMUST00000004949 Ttc21bQ0HA38 1315 aa16.25■□□□□ 0.19
Traf6-201ENSMUST00000004949 AqrQ8CFQ3 1481 aaKnown RBP16.25■□□□□ 0.19
Traf6-201ENSMUST00000004949 Dnai2A2AC93 623 aa16.25■□□□□ 0.19
Traf6-201ENSMUST00000004949 Fmnl2A2APV2 1086 aa16.25■□□□□ 0.19
Traf6-201ENSMUST00000004949 Smg7Q5RJH6 1138 aaKnown RBP16.25■□□□□ 0.19
Traf6-201ENSMUST00000004949 HypkQ9CR41 129 aa16.25■□□□□ 0.19
Traf6-201ENSMUST00000004949 Smarce1O54941 411 aaKnown RBP16.24■□□□□ 0.19
Traf6-201ENSMUST00000004949 Rab3gap2Q8BMG7 1366 aa16.23■□□□□ 0.19
Traf6-201ENSMUST00000004949 GphnQ8BUV3 769 aaKnown RBP16.23■□□□□ 0.19
Traf6-201ENSMUST00000004949 Rfx1P48377 963 aa16.23■□□□□ 0.19
Traf6-201ENSMUST00000004949 Sugp2Q8CH09 1067 aa16.22■□□□□ 0.19
Traf6-201ENSMUST00000004949 Speer4bQ9D9F7 267 aa16.22■□□□□ 0.19
Traf6-201ENSMUST00000004949 Hmox1P14901 289 aa16.22■□□□□ 0.19
Traf6-201ENSMUST00000004949 Ggnbp2Q5SV77 696 aa16.22■□□□□ 0.19
Traf6-201ENSMUST00000004949 R3hcc1Q8BSI6 488 aa16.22■□□□□ 0.19
Traf6-201ENSMUST00000004949 PtmsQ9D0J8 101 aaKnown RBP16.21■□□□□ 0.19
Traf6-201ENSMUST00000004949 Zfp444Q3TDV8 331 aaKnown RBP16.2■□□□□ 0.18
Traf6-201ENSMUST00000004949 Ccer1Q9CQL2 403 aa16.2■□□□□ 0.18
Traf6-201ENSMUST00000004949 Q9D2X8 372 aa16.2■□□□□ 0.18
Traf6-201ENSMUST00000004949 Atp10dQ8K2X1 1416 aa16.2■□□□□ 0.18
Traf6-201ENSMUST00000004949 Cavin4A2AMM0 362 aa16.2■□□□□ 0.18
Traf6-201ENSMUST00000004949 Naip2Q9QUK4 1447 aa16.2■□□□□ 0.18
Traf6-201ENSMUST00000004949 PalmQ9Z0P4 383 aa16.2■□□□□ 0.18
Traf6-201ENSMUST00000004949 Phactr2B1AVP0 632 aa16.2■□□□□ 0.18
Traf6-201ENSMUST00000004949 Vps53Q8CCB4 832 aa16.19■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 1194.9 ms