RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Polr3aB2RXC6 1390 aa21.02■□□□□ 0.96
Ercc1-201ENSMUST00000003645 Kdm5aQ3UXZ9 1690 aa21.02■□□□□ 0.96
Ercc1-201ENSMUST00000003645 Cpsf1Q9EPU4 1441 aaKnown RBP21.02■□□□□ 0.95
Ercc1-201ENSMUST00000003645 Iqgap1Q9JKF1 1657 aaKnown RBP21.01■□□□□ 0.95
Ercc1-201ENSMUST00000003645 Prrc2bQ7TPM1 1486 aaKnown RBP21■□□□□ 0.95
Ercc1-201ENSMUST00000003645 Kif13aQ9EQW7 1749 aa20.99■□□□□ 0.95
Ercc1-201ENSMUST00000003645 Chd2E9PZM4 1827 aaKnown RBP20.99■□□□□ 0.95
Ercc1-201ENSMUST00000003645 AU022751B1B0V2 589 aa20.98■□□□□ 0.95
Ercc1-201ENSMUST00000003645 Neurod1Q60867 357 aa20.98■□□□□ 0.95
Ercc1-201ENSMUST00000003645 Rims1Q99NE5 1463 aa20.98■□□□□ 0.95
Ercc1-201ENSMUST00000003645 Ifit1bl1D3Z6F0 470 aa20.97■□□□□ 0.95
Ercc1-201ENSMUST00000003645 Grwd1Q810D6 446 aaKnown RBP20.97■□□□□ 0.95
Ercc1-201ENSMUST00000003645 Mug2P28666 1451 aa20.96■□□□□ 0.95
Ercc1-201ENSMUST00000003645 Ppargc1bQ8VHJ7 1014 aa20.96■□□□□ 0.95
Ercc1-201ENSMUST00000003645 Cdk13Q69ZA1 1511 aaKnown RBP20.94■□□□□ 0.94
Ercc1-201ENSMUST00000003645 Plxnc1Q9QZC2 1574 aa20.92■□□□□ 0.94
Ercc1-201ENSMUST00000003645 GphnQ8BUV3 769 aaKnown RBP20.92■□□□□ 0.94
Ercc1-201ENSMUST00000003645 Brwd3A2AHJ4 1799 aa20.91■□□□□ 0.94
Ercc1-201ENSMUST00000003645 Gemin5Q8BX17 1502 aaKnown RBP20.9■□□□□ 0.94
Ercc1-201ENSMUST00000003645 Topaz1E5FYH1 1653 aa20.89■□□□□ 0.94
Ercc1-201ENSMUST00000003645 Dapk1Q80YE7 1442 aa20.88■□□□□ 0.93
Ercc1-201ENSMUST00000003645 Myom1Q62234 1667 aaKnown RBP20.87■□□□□ 0.93
Ercc1-201ENSMUST00000003645 Cep152A2AUM9 1736 aaKnown RBP20.86■□□□□ 0.93
Ercc1-201ENSMUST00000003645 Myo3aQ8K3H5 1613 aa20.86■□□□□ 0.93
Ercc1-201ENSMUST00000003645 Kdm2aP59997 1161 aa20.85■□□□□ 0.93
Ercc1-201ENSMUST00000003645 Txndc2Q6P902 515 aa20.85■□□□□ 0.93
Ercc1-201ENSMUST00000003645 Slc52a2Q9D8F3 450 aa20.85■□□□□ 0.93
Ercc1-201ENSMUST00000003645 Rundc1Q0VDN7 615 aa20.84■□□□□ 0.93
Ercc1-201ENSMUST00000003645 Zc3h13E9Q784 1729 aaKnown RBP20.84■□□□□ 0.93
Ercc1-201ENSMUST00000003645 RalgapbQ8BQZ4 1484 aa20.82■□□□□ 0.92
Ercc1-201ENSMUST00000003645 PplQ9R269 1755 aa20.82■□□□□ 0.92
Ercc1-201ENSMUST00000003645 Srpk2O54781 681 aaKnown RBP20.82■□□□□ 0.92
Ercc1-201ENSMUST00000003645 Gm20521D3Z5F7 333 aa20.81■□□□□ 0.92
Ercc1-201ENSMUST00000003645 Psme1P97371 249 aa20.81■□□□□ 0.92
Ercc1-201ENSMUST00000003645 P3h3Q8CG70 732 aa20.79■□□□□ 0.92
Ercc1-201ENSMUST00000003645 Card11Q8CIS0 1159 aa20.79■□□□□ 0.92
Ercc1-201ENSMUST00000003645 Fan1Q69ZT1 1020 aa20.78■□□□□ 0.92
Ercc1-201ENSMUST00000003645 Arhgef28P97433 1693 aa20.78■□□□□ 0.92
Ercc1-201ENSMUST00000003645 Lmtk3Q5XJV6 1424 aa20.77■□□□□ 0.92
Ercc1-201ENSMUST00000003645 PalldQ9ET54 1408 aa20.77■□□□□ 0.92
Ercc1-201ENSMUST00000003645 IghaA0A0A6YXW6 389 aa20.77■□□□□ 0.92
Ercc1-201ENSMUST00000003645 Aebp2Q9Z248 504 aaKnown RBP20.77■□□□□ 0.92
Ercc1-201ENSMUST00000003645 Puf60Q3UEB3 564 aaKnown RBP20.76■□□□□ 0.91
Ercc1-201ENSMUST00000003645 Shq1Q7TMX5 569 aa20.76■□□□□ 0.91
Ercc1-201ENSMUST00000003645 Setd1aE9PYH6 1716 aa20.76■□□□□ 0.91
Ercc1-201ENSMUST00000003645 Eif2ak4Q9QZ05 1648 aa20.76■□□□□ 0.91
Ercc1-201ENSMUST00000003645 Arid4bA2CG63 1314 aaKnown RBP20.75■□□□□ 0.91
Ercc1-201ENSMUST00000003645 Cdk5rap2Q8K389 1822 aa20.74■□□□□ 0.91
Ercc1-201ENSMUST00000003645 Os9Q8K2C7 672 aa20.74■□□□□ 0.91
Ercc1-201ENSMUST00000003645 Rimbp3Q3V0F0 1606 aa20.74■□□□□ 0.91
Ercc1-201ENSMUST00000003645 Scaf11E9PZM7 1456 aaKnown RBP20.74■□□□□ 0.91
Ercc1-201ENSMUST00000003645 Atp1b4Q99ME6 356 aa20.73■□□□□ 0.91
Ercc1-201ENSMUST00000003645 Q9D9H8 365 aa20.73■□□□□ 0.91
Ercc1-201ENSMUST00000003645 Slit3Q9WVB4 1523 aa20.73■□□□□ 0.91
Ercc1-201ENSMUST00000003645 Dip2aQ8BWT5 1523 aa20.72■□□□□ 0.91
Ercc1-201ENSMUST00000003645 MaddQ80U28 1577 aa20.72■□□□□ 0.91
Ercc1-201ENSMUST00000003645 Stard8Q8K031 1019 aa20.7■□□□□ 0.9
Ercc1-201ENSMUST00000003645 Asxl2Q8BZ32 1370 aa20.7■□□□□ 0.9
Ercc1-201ENSMUST00000003645 Nphp4P59240 1425 aa20.69■□□□□ 0.9
Ercc1-201ENSMUST00000003645 Lrrc7Q80TE7 1490 aa20.69■□□□□ 0.9
Ercc1-201ENSMUST00000003645 Gm13695A2AK44 830 aa20.69■□□□□ 0.9
Ercc1-201ENSMUST00000003645 Sin3aQ60520 1274 aaKnown RBP20.69■□□□□ 0.9
Ercc1-201ENSMUST00000003645 Usp40Q8BWR4 1235 aa20.69■□□□□ 0.9
Ercc1-201ENSMUST00000003645 Cwc22Q8C5N3 908 aaKnown RBP20.68■□□□□ 0.9
Ercc1-201ENSMUST00000003645 DnmbpQ6TXD4 1580 aa20.67■□□□□ 0.9
Ercc1-201ENSMUST00000003645 Sipa1l1Q8C0T5 1782 aa20.66■□□□□ 0.9
Ercc1-201ENSMUST00000003645 Rims2Q9EQZ7 1530 aa20.65■□□□□ 0.9
Ercc1-201ENSMUST00000003645 Srcin1Q9QWI6 1250 aa20.65■□□□□ 0.9
Ercc1-201ENSMUST00000003645 PzpQ61838 1495 aa20.65■□□□□ 0.9
Ercc1-201ENSMUST00000003645 Pik3r4Q8VD65 1358 aa20.64■□□□□ 0.9
Ercc1-201ENSMUST00000003645 Gtf2e1Q9D0D5 440 aa20.64■□□□□ 0.89
Ercc1-201ENSMUST00000003645 Phlpp1Q8CHE4 1687 aa20.63■□□□□ 0.89
Ercc1-201ENSMUST00000003645 Rock2P70336 1388 aa20.63■□□□□ 0.89
Ercc1-201ENSMUST00000003645 Ncoa1P70365 1447 aa20.63■□□□□ 0.89
Ercc1-201ENSMUST00000003645 Cyb5rlB1AS42 316 aa20.62■□□□□ 0.89
Ercc1-201ENSMUST00000003645 IqubQ8CDK3 788 aa20.6■□□□□ 0.89
Ercc1-201ENSMUST00000003645 Pola1P33609 1465 aa20.6■□□□□ 0.89
Ercc1-201ENSMUST00000003645 Arap3Q8R5G7 1538 aa20.6■□□□□ 0.89
Ercc1-201ENSMUST00000003645 Wdr66E9Q743 1299 aa20.59■□□□□ 0.89
Ercc1-201ENSMUST00000003645 Stk26Q99JT2 416 aa20.59■□□□□ 0.89
Ercc1-201ENSMUST00000003645 Scn4aQ9ER60 1841 aa20.59■□□□□ 0.89
Ercc1-201ENSMUST00000003645 Plekhg1F6S200 1446 aa20.59■□□□□ 0.89
Ercc1-201ENSMUST00000003645 Utp14aQ640M1 767 aaKnown RBP20.59■□□□□ 0.89
Ercc1-201ENSMUST00000003645 Med1Q925J9 1575 aa20.58■□□□□ 0.88
Ercc1-201ENSMUST00000003645 Ift172Q6VH22 1749 aa20.58■□□□□ 0.88
Ercc1-201ENSMUST00000003645 Stag3O70576 1240 aa20.57■□□□□ 0.88
Ercc1-201ENSMUST00000003645 Nrxn3Q6P9K9 1571 aa20.56■□□□□ 0.88
Ercc1-201ENSMUST00000003645 Cep170bQ80U49 1574 aa20.56■□□□□ 0.88
Ercc1-201ENSMUST00000003645 Ltbp4Q8K4G1 1666 aa20.54■□□□□ 0.88
Ercc1-201ENSMUST00000003645 Cps1Q8C196 1500 aa20.53■□□□□ 0.88
Ercc1-201ENSMUST00000003645 Zbtb4Q5F293 982 aa20.52■□□□□ 0.88
Ercc1-201ENSMUST00000003645 HnrnpmQ9D0E1 729 aaKnown RBP20.51■□□□□ 0.87
Ercc1-201ENSMUST00000003645 ClspnQ80YR7 1315 aa20.5■□□□□ 0.87
Ercc1-201ENSMUST00000003645 Gm16486A0A1D5RMD1 1434 aa20.49■□□□□ 0.87
Ercc1-201ENSMUST00000003645 Plekhg5Q66T02 1073 aa20.49■□□□□ 0.87
Ercc1-201ENSMUST00000003645 Rapgef3Q8VCC8 918 aa20.49■□□□□ 0.87
Ercc1-201ENSMUST00000003645 Thsd7aQ69ZU6 1645 aa20.48■□□□□ 0.87
Ercc1-201ENSMUST00000003645 CenpjQ569L8 1344 aa20.47■□□□□ 0.87
Ercc1-201ENSMUST00000003645 Pip4k2bQ80XI4 416 aa20.46■□□□□ 0.87
Ercc1-201ENSMUST00000003645 Itsn2Q9Z0R6 1659 aa20.46■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms