RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W TRR1P29509 319 aaKnown RBP3.11□□□□□ -1.91
MSD1YPL104W DEG1P31115 442 aaKnown RBP3.11□□□□□ -1.91
MSD1YPL104W VAM7P32912 316 aa3.11□□□□□ -1.91
MSD1YPL104W NIF3P53081 288 aa3.11□□□□□ -1.91
MSD1YPL104W ALG9P53868 555 aaKnown RBP3.11□□□□□ -1.91
MSD1YPL104W RPL7BQ12213 244 aaKnown RBP3.11□□□□□ -1.91
MSD1YPL104W SPS4P09937 338 aa3.1□□□□□ -1.91
MSD1YPL104W SEN2P16658 377 aa3.1□□□□□ -1.91
MSD1YPL104W PEX4P29340 183 aa3.1□□□□□ -1.91
MSD1YPL104W AGA2P32781 87 aa3.1□□□□□ -1.91
MSD1YPL104W MRPS5P33759 307 aa3.1□□□□□ -1.91
MSD1YPL104W ARC40P38328 384 aaKnown RBP3.1□□□□□ -1.91
MSD1YPL104W MTC6P38849 526 aa3.1□□□□□ -1.91
MSD1YPL104W PTI1P39927 425 aaPredicted RBP3.1□□□□□ -1.91
MSD1YPL104W YMR144WP40214 342 aaKnown RBP3.1□□□□□ -1.91
MSD1YPL104W PHB1P40961 287 aa3.1□□□□□ -1.91
MSD1YPL104W HXT14P42833 540 aa3.1□□□□□ -1.91
MSD1YPL104W UBP8P50102 471 aa3.1□□□□□ -1.91
MSD1YPL104W RCE1Q03530 315 aa3.1□□□□□ -1.91
MSD1YPL104W YDR391CQ04170 232 aa3.1□□□□□ -1.91
MSD1YPL104W SCP1Q08873 200 aa3.1□□□□□ -1.91
MSD1YPL104W FEX1Q08913 375 aa3.1□□□□□ -1.91
MSD1YPL104W FEX2Q08991 375 aa3.1□□□□□ -1.91
MSD1YPL104W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
MSD1YPL104W RKI1Q12189 258 aa3.1□□□□□ -1.91
MSD1YPL104W MED4Q12343 284 aa3.1□□□□□ -1.91
MSD1YPL104W UBA3Q99344 299 aa3.1□□□□□ -1.91
MSD1YPL104W CDC28P00546 298 aaKnown RBP3.09□□□□□ -1.91
MSD1YPL104W TPI1P00942 248 aaKnown RBP3.09□□□□□ -1.91
MSD1YPL104W YLL053CP0CD98 152 aa3.09□□□□□ -1.91
MSD1YPL104W ATG15P25641 520 aa3.09□□□□□ -1.91
MSD1YPL104W REC114P32841 428 aa3.09□□□□□ -1.91
MSD1YPL104W MCH2P36032 473 aa3.09□□□□□ -1.91
MSD1YPL104W YPT10P38146 199 aa3.09□□□□□ -1.91
MSD1YPL104W FIG1P38224 298 aa3.09□□□□□ -1.91
MSD1YPL104W YPC1P38298 316 aa3.09□□□□□ -1.91
MSD1YPL104W YMR262WP38430 313 aa3.09□□□□□ -1.91
MSD1YPL104W LAG1P38703 411 aa3.09□□□□□ -1.91
MSD1YPL104W COS8P38723 381 aa3.09□□□□□ -1.91
MSD1YPL104W YER084WP40057 128 aa3.09□□□□□ -1.91
MSD1YPL104W BMT5P40493 336 aa3.09□□□□□ -1.91
MSD1YPL104W YIL029CP40538 142 aa3.09□□□□□ -1.91
MSD1YPL104W GWT1P47026 490 aa3.09□□□□□ -1.91
MSD1YPL104W YJR011CP47086 261 aaPredicted RBP3.09□□□□□ -1.91
MSD1YPL104W SSN8P47821 323 aa3.09□□□□□ -1.91
MSD1YPL104W UFD1P53044 361 aa3.09□□□□□ -1.91
MSD1YPL104W RPN14P53196 417 aa3.09□□□□□ -1.91
MSD1YPL104W YNL092WP53934 400 aa3.09□□□□□ -1.91
MSD1YPL104W DID2P69771 204 aa3.09□□□□□ -1.91
MSD1YPL104W NOC4Q06512 552 aaPredicted RBP3.09□□□□□ -1.91
MSD1YPL104W RAF1Q06891 181 aa3.09□□□□□ -1.91
MSD1YPL104W YOR186WQ08560 144 aa3.09□□□□□ -1.91
MSD1YPL104W AEP3Q12089 606 aa3.09□□□□□ -1.91
MSD1YPL104W VAM3Q12241 283 aa3.09□□□□□ -1.91
MSD1YPL104W IRA2P19158 3079 aa3.09□□□□□ -1.91
MSD1YPL104W REP2P03872 296 aa3.09□□□□□ -1.92
MSD1YPL104W HEM4P06174 275 aa3.09□□□□□ -1.92
MSD1YPL104W ARO3P14843 370 aaKnown RBP3.09□□□□□ -1.92
MSD1YPL104W SAG1P20840 650 aa3.09□□□□□ -1.92
MSD1YPL104W MIR1P23641 311 aaKnown RBP3.09□□□□□ -1.92
MSD1YPL104W FLX1P40464 311 aa3.09□□□□□ -1.92
MSD1YPL104W XBP1P40489 647 aa3.09□□□□□ -1.92
MSD1YPL104W YIR035CP40579 254 aa3.09□□□□□ -1.92
MSD1YPL104W BUL1P48524 976 aa3.09□□□□□ -1.92
MSD1YPL104W UBC12P52491 188 aa3.09□□□□□ -1.92
MSD1YPL104W RTT103Q05543 409 aa3.09□□□□□ -1.92
MSD1YPL104W ANT1Q06497 328 aa3.09□□□□□ -1.92
MSD1YPL104W FIT3Q08907 204 aa3.09□□□□□ -1.92
MSD1YPL104W TFC7Q12415 435 aa3.09□□□□□ -1.92
MSD1YPL104W IRA1P18963 3092 aa3.08□□□□□ -1.92
MSD1YPL104W QCR2P07257 368 aa3.08□□□□□ -1.92
MSD1YPL104W RPL35AP0CX84 120 aaKnown RBP3.08□□□□□ -1.92
MSD1YPL104W RPL35BP0CX85 120 aaKnown RBP3.08□□□□□ -1.92
MSD1YPL104W SEC22P22214 214 aa3.08□□□□□ -1.92
MSD1YPL104W YCR101CP25607 182 aa3.08□□□□□ -1.92
MSD1YPL104W TIP1P27654 210 aaPredicted RBP3.08□□□□□ -1.92
MSD1YPL104W LAC1P28496 418 aa3.08□□□□□ -1.92
MSD1YPL104W OCH1P31755 480 aa3.08□□□□□ -1.92
MSD1YPL104W NAT2P37293 288 aa3.08□□□□□ -1.92
MSD1YPL104W YER079WP40052 210 aaKnown RBP3.08□□□□□ -1.92
MSD1YPL104W MRX5P47007 382 aa3.08□□□□□ -1.92
MSD1YPL104W YJR111CP47148 283 aaKnown RBP3.08□□□□□ -1.92
MSD1YPL104W SIP18P50263 79 aa3.08□□□□□ -1.92
MSD1YPL104W YGL260WP53056 76 aa3.08□□□□□ -1.92
MSD1YPL104W ACT1P60010 375 aaKnown RBP3.08□□□□□ -1.92
MSD1YPL104W THI74Q04083 370 aa3.08□□□□□ -1.92
MSD1YPL104W DPB4Q04603 196 aaKnown RBP3.08□□□□□ -1.92
MSD1YPL104W YPR098CQ06089 161 aa3.08□□□□□ -1.92
MSD1YPL104W PIN3Q06449 215 aa3.08□□□□□ -1.92
MSD1YPL104W NCE102Q12207 173 aaRIP-Chip data3.08□□□□□ -1.92not detected
MSD1YPL104W FOL3Q12676 427 aaPredicted RBP3.08□□□□□ -1.92
MSD1YPL104W RPL25P04456 142 aaKnown RBP3.07□□□□□ -1.92
MSD1YPL104W GLC7P32598 312 aaKnown RBP3.07□□□□□ -1.92
MSD1YPL104W PDC2P32896 925 aa3.07□□□□□ -1.92
MSD1YPL104W CLB6P32943 380 aa3.07□□□□□ -1.92
MSD1YPL104W YBR144CP34215 104 aa3.07□□□□□ -1.92
MSD1YPL104W PRS2P38620 318 aaKnown RBP3.07□□□□□ -1.92
MSD1YPL104W GCV3P39726 170 aaPredicted RBP3.07□□□□□ -1.92
MSD1YPL104W CCS1P40202 249 aaKnown RBP3.07□□□□□ -1.92
MSD1YPL104W IRC24P40580 263 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms