RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W YMD8Q03697 442 aa1.41□□□□□ -2.18
BRO1YPL084W YOR283WQ12040 230 aaKnown RBP1.41□□□□□ -2.18
BRO1YPL084W DCN1Q12395 269 aa1.41□□□□□ -2.18
BRO1YPL084W MYO4P32492 1471 aa1.41□□□□□ -2.18
BRO1YPL084W RPL9AP05738 191 aaKnown RBP1.4□□□□□ -2.18
BRO1YPL084W YPR170W-BP0C5R9 85 aa1.4□□□□□ -2.18
BRO1YPL084W DBF2P22204 572 aa1.4□□□□□ -2.18
BRO1YPL084W YIL001WP40560 513 aa1.4□□□□□ -2.18
BRO1YPL084W ADO1P47143 340 aaKnown RBP1.4□□□□□ -2.18
BRO1YPL084W RPL9BP51401 191 aaKnown RBP1.4□□□□□ -2.18
BRO1YPL084W NCB2Q92317 146 aa1.4□□□□□ -2.18
BRO1YPL084W SPO14P36126 1683 aa1.4□□□□□ -2.18
BRO1YPL084W YDR157WA0A023PZE8 133 aa1.4□□□□□ -2.19
BRO1YPL084W CDC36P06100 191 aaPredicted RBP1.4□□□□□ -2.19
BRO1YPL084W CDC33P07260 213 aaKnown RBP1.4□□□□□ -2.19
BRO1YPL084W RPB4P20433 221 aaPredicted RBP1.4□□□□□ -2.19
BRO1YPL084W BXI1P48558 297 aa1.4□□□□□ -2.19
BRO1YPL084W YML108WQ03759 105 aa1.4□□□□□ -2.19
BRO1YPL084W JLP1Q12358 412 aa1.4□□□□□ -2.19
BRO1YPL084W SRB8P25648 1427 aa1.4□□□□□ -2.19
BRO1YPL084W GSC2P40989 1895 aa1.39□□□□□ -2.19
BRO1YPL084W MSW1P04803 379 aa1.39□□□□□ -2.19
BRO1YPL084W GRX2P17695 143 aaKnown RBP1.39□□□□□ -2.19
BRO1YPL084W YKT6P36015 200 aaKnown RBP1.39□□□□□ -2.19
BRO1YPL084W DOG2P38773 246 aa1.39□□□□□ -2.19
BRO1YPL084W DOG1P38774 246 aa1.39□□□□□ -2.19
BRO1YPL084W IRC22P40006 225 aa1.39□□□□□ -2.19
BRO1YPL084W YJL027CP47063 138 aaPredicted RBP1.39□□□□□ -2.19
BRO1YPL084W YDR248CQ03786 193 aa1.39□□□□□ -2.19
BRO1YPL084W OAC1P32332 324 aa1.39□□□□□ -2.19
BRO1YPL084W CWC23P52868 283 aaPredicted RBP1.39□□□□□ -2.19
BRO1YPL084W MGA1P53050 456 aa1.39□□□□□ -2.19
BRO1YPL084W BNA7Q04066 261 aa1.39□□□□□ -2.19
BRO1YPL084W YHR086W-AQ3E746 53 aa1.39□□□□□ -2.19
BRO1YPL084W LSO2Q3E772 92 aaKnown RBP1.39□□□□□ -2.19
BRO1YPL084W NRG2P38082 220 aa1.38□□□□□ -2.19
BRO1YPL084W FCY21P40039 528 aa1.38□□□□□ -2.19
BRO1YPL084W CIS3P47001 227 aa1.38□□□□□ -2.19
BRO1YPL084W YGR219WP53307 113 aa1.38□□□□□ -2.19
BRO1YPL084W MRPS8Q03799 155 aa1.38□□□□□ -2.19
BRO1YPL084W LPP1Q04396 274 aa1.38□□□□□ -2.19
BRO1YPL084W ARR2Q06597 130 aa1.38□□□□□ -2.19
BRO1YPL084W USO1P25386 1790 aa1.38□□□□□ -2.19
BRO1YPL084W DID2P69771 204 aa1.38□□□□□ -2.19
BRO1YPL084W CWC21Q03375 135 aaKnown RBP1.38□□□□□ -2.19
BRO1YPL084W BUD3P25558 1636 aa1.37□□□□□ -2.19
BRO1YPL084W CDC8P00572 216 aa1.37□□□□□ -2.19
BRO1YPL084W PRX1P34227 261 aaKnown RBP1.37□□□□□ -2.19
BRO1YPL084W CAT8P39113 1433 aa1.37□□□□□ -2.19
BRO1YPL084W IRC18P47056 224 aa1.37□□□□□ -2.19
BRO1YPL084W PRM8P53174 237 aa1.37□□□□□ -2.19
BRO1YPL084W NEJ1Q06148 342 aa1.37□□□□□ -2.19
BRO1YPL084W PSF1Q12488 208 aa1.37□□□□□ -2.19
BRO1YPL084W PDR5P33302 1511 aaKnown RBP1.37□□□□□ -2.19
BRO1YPL084W IDH1P28834 360 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
BRO1YPL084W PEX4P29340 183 aa1.37□□□□□ -2.19
BRO1YPL084W MDH3P32419 343 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
BRO1YPL084W TAF14P35189 244 aa1.37□□□□□ -2.19
BRO1YPL084W FAR7P43592 221 aa1.37□□□□□ -2.19
BRO1YPL084W YNL010WP53981 241 aaKnown RBP1.37□□□□□ -2.19
BRO1YPL084W GRX3Q03835 250 aa1.37□□□□□ -2.19
BRO1YPL084W TRM12Q04235 462 aa1.37□□□□□ -2.19
BRO1YPL084W TDA8Q6B2U8 126 aa1.37□□□□□ -2.19
BRO1YPL084W GCN2P15442 1659 aa1.36□□□□□ -2.19
BRO1YPL084W RAS2P01120 322 aaKnown RBP1.36□□□□□ -2.19
BRO1YPL084W GCN3P14741 305 aa1.36□□□□□ -2.19
BRO1YPL084W ATG22P25568 528 aa1.36□□□□□ -2.19
BRO1YPL084W APS1P35181 156 aa1.36□□□□□ -2.19
BRO1YPL084W YHR180WP38868 163 aa1.36□□□□□ -2.19
BRO1YPL084W RSM25P40496 264 aa1.36□□□□□ -2.19
BRO1YPL084W PDR17P53844 350 aa1.36□□□□□ -2.19
BRO1YPL084W GAS3Q03655 524 aa1.36□□□□□ -2.19
BRO1YPL084W YRA1Q12159 226 aaKnown RBP1.36□□□□□ -2.19
BRO1YPL084W PDR10P51533 1564 aa1.36□□□□□ -2.19
BRO1YPL084W SNQ2P32568 1501 aaKnown RBP1.36□□□□□ -2.19
BRO1YPL084W RPO21P04050 1733 aaKnown RBP1.36□□□□□ -2.19
BRO1YPL084W FBA1P14540 359 aaKnown RBP1.36□□□□□ -2.19
BRO1YPL084W SCL1P21243 252 aaKnown RBP1.36□□□□□ -2.19
BRO1YPL084W PHO88P38264 188 aaPredicted RBP1.36□□□□□ -2.19
BRO1YPL084W ERV15P38312 142 aa1.36□□□□□ -2.19
BRO1YPL084W SIP3P38717 1229 aa1.36□□□□□ -2.19
BRO1YPL084W TY3B-GQ99315 1547 aa1.36□□□□□ -2.19
BRO1YPL084W REP2P03872 296 aa1.35□□□□□ -2.19
BRO1YPL084W YLR156WP0CE96 114 aa1.35□□□□□ -2.19
BRO1YPL084W YLR159WP0CE97 114 aa1.35□□□□□ -2.19
BRO1YPL084W YLR161WP0CE98 114 aa1.35□□□□□ -2.19
BRO1YPL084W IKI1P38874 309 aa1.35□□□□□ -2.19
BRO1YPL084W SNZ1Q03148 297 aa1.35□□□□□ -2.19
BRO1YPL084W TUS1Q06412 1307 aa1.35□□□□□ -2.19
BRO1YPL084W VMR1P38735 1592 aa1.35□□□□□ -2.19
BRO1YPL084W RSF2P46974 1380 aa1.35□□□□□ -2.19
BRO1YPL084W POP4P38336 279 aa1.35□□□□□ -2.19
BRO1YPL084W PRM10P42946 383 aa1.35□□□□□ -2.19
BRO1YPL084W DAD3P69850 94 aa1.35□□□□□ -2.19
BRO1YPL084W SPG3Q04398 127 aaPredicted RBP1.35□□□□□ -2.19
BRO1YPL084W YHR214C-EQ8TGK0 99 aa1.35□□□□□ -2.19
BRO1YPL084W HTB1P02293 131 aaKnown RBP1.34□□□□□ -2.19
BRO1YPL084W HTB2P02294 131 aa1.34□□□□□ -2.19
BRO1YPL084W CBF1P17106 351 aa1.34□□□□□ -2.19
BRO1YPL084W RFA3P26755 122 aaKnown RBP1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms