RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W POP4P38336 279 aa2.67□□□□□ -1.98
VPS28YPL065W DAD3P69850 94 aa2.67□□□□□ -1.98
VPS28YPL065W PET191Q02772 108 aa2.67□□□□□ -1.98
VPS28YPL065W YRA1Q12159 226 aaKnown RBP2.67□□□□□ -1.98
VPS28YPL065W RFA3P26755 122 aaKnown RBP2.66□□□□□ -1.98
VPS28YPL065W IKI1P38874 309 aa2.66□□□□□ -1.98
VPS28YPL065W YHR214C-EQ8TGK0 99 aa2.66□□□□□ -1.98
VPS28YPL065W HTB1P02293 131 aaKnown RBP2.65□□□□□ -1.99
VPS28YPL065W HTB2P02294 131 aa2.65□□□□□ -1.99
VPS28YPL065W FBA1P14540 359 aaKnown RBP2.65□□□□□ -1.99
VPS28YPL065W CBF1P17106 351 aa2.65□□□□□ -1.99
VPS28YPL065W PHO88P38264 188 aaPredicted RBP2.65□□□□□ -1.99
VPS28YPL065W SNZ1Q03148 297 aa2.65□□□□□ -1.99
VPS28YPL065W MATALPHA2P0CY08 210 aa2.64□□□□□ -1.99
VPS28YPL065W HMLALPHA2P0CY09 210 aa2.64□□□□□ -1.99
VPS28YPL065W MGM101P32787 269 aaKnown RBP2.64□□□□□ -1.99
VPS28YPL065W ERV15P38312 142 aa2.64□□□□□ -1.99
VPS28YPL065W RFC4P40339 323 aaKnown RBP2.64□□□□□ -1.99
VPS28YPL065W AIF1P52923 378 aa2.64□□□□□ -1.99
VPS28YPL065W CUS2P53830 285 aaPredicted RBP2.64□□□□□ -1.99
VPS28YPL065W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
VPS28YPL065W SEC4P07560 215 aaKnown RBP2.63□□□□□ -1.99
VPS28YPL065W UTP30P36144 274 aaKnown RBP2.63□□□□□ -1.99
VPS28YPL065W YCR087C-AP37263 153 aa2.63□□□□□ -1.99
VPS28YPL065W CGR1P53188 120 aa2.63□□□□□ -1.99
VPS28YPL065W YNR062CP53748 327 aa2.63□□□□□ -1.99
VPS28YPL065W CYT2Q00873 224 aa2.63□□□□□ -1.99
VPS28YPL065W YCL012CQ8J0M4 134 aa2.63□□□□□ -1.99
VPS28YPL065W CDC7P06243 507 aa2.62□□□□□ -1.99
VPS28YPL065W MER1P16523 270 aa2.62□□□□□ -1.99
VPS28YPL065W SEC17P32602 292 aa2.62□□□□□ -1.99
VPS28YPL065W PTM1P32857 523 aa2.62□□□□□ -1.99
VPS28YPL065W YHR022CP38763 256 aa2.62□□□□□ -1.99
VPS28YPL065W RMD6P39975 231 aa2.62□□□□□ -1.99
VPS28YPL065W BMT5P40493 336 aa2.62□□□□□ -1.99
VPS28YPL065W YKE4P40544 346 aa2.62□□□□□ -1.99
VPS28YPL065W YMR226CQ05016 267 aaKnown RBP2.62□□□□□ -1.99
VPS28YPL065W MEI4P29467 408 aa2.61□□□□□ -1.99
VPS28YPL065W MRPL28P36527 147 aa2.61□□□□□ -1.99
VPS28YPL065W PGD1P40356 397 aa2.61□□□□□ -1.99
VPS28YPL065W RPL33BP41056 107 aaKnown RBP2.61□□□□□ -1.99
VPS28YPL065W YGR050CP53231 118 aa2.61□□□□□ -1.99
VPS28YPL065W YPL162CQ12042 273 aa2.61□□□□□ -1.99
VPS28YPL065W MCP1Q12106 302 aa2.61□□□□□ -1.99
VPS28YPL065W GET4Q12125 312 aa2.61□□□□□ -1.99
VPS28YPL065W PET9P18239 318 aaKnown RBP2.6□□□□□ -1.99
VPS28YPL065W ERG25P53045 309 aa2.6□□□□□ -1.99
VPS28YPL065W MRPS17Q03246 237 aaPredicted RBP2.6□□□□□ -1.99
VPS28YPL065W USB1Q12208 290 aaKnown RBP2.6□□□□□ -1.99
VPS28YPL065W SKG1P36169 355 aa2.59□□□□□ -1.99
VPS28YPL065W NOP19P53317 196 aaPredicted RBP2.59□□□□□ -1.99
VPS28YPL065W LSM7P53905 115 aaKnown RBP2.59□□□□□ -1.99
VPS28YPL065W SWP1Q02795 286 aa2.59□□□□□ -1.99
VPS28YPL065W YOL160WQ08321 113 aa2.59□□□□□ -1.99
VPS28YPL065W JIP3O13555 125 aa2.58□□□□□ -2
VPS28YPL065W DDI2P0CH63 225 aa2.58□□□□□ -2
VPS28YPL065W DDI3P0CH64 225 aa2.58□□□□□ -2
VPS28YPL065W MRPS28P21771 286 aa2.58□□□□□ -2
VPS28YPL065W MRPL17P36528 281 aa2.58□□□□□ -2
VPS28YPL065W TRM5P38793 499 aa2.58□□□□□ -2
VPS28YPL065W AST2P39945 430 aaKnown RBP2.58□□□□□ -2
VPS28YPL065W AYR1P40471 297 aa2.58□□□□□ -2
VPS28YPL065W BOL1Q3E793 110 aa2.58□□□□□ -2
VPS28YPL065W YFR032C-BQ8TGU2 87 aa2.58□□□□□ -2
VPS28YPL065W YIL177CP40434 1758 aa2.57□□□□□ -2
VPS28YPL065W YJL225CP40889 1758 aa2.57□□□□□ -2
VPS28YPL065W TIM9O74700 87 aa2.57□□□□□ -2
VPS28YPL065W KSS1P14681 368 aa2.57□□□□□ -2
VPS28YPL065W ICE2P40499 491 aa2.57□□□□□ -2
VPS28YPL065W YRB2P40517 327 aa2.57□□□□□ -2
VPS28YPL065W AGE2P40529 298 aa2.57□□□□□ -2
VPS28YPL065W GET1P53192 235 aa2.57□□□□□ -2
VPS28YPL065W ABP140Q08641 628 aaKnown RBP2.57□□□□□ -2
VPS28YPL065W RPL25P04456 142 aaKnown RBP2.56□□□□□ -2
VPS28YPL065W RPL27BP0C2H7 136 aaKnown RBP2.56□□□□□ -2
VPS28YPL065W LSM4P40070 187 aaKnown RBP2.56□□□□□ -2
VPS28YPL065W TIR3P40552 269 aa2.56□□□□□ -2
VPS28YPL065W AIM25P47140 327 aa2.56□□□□□ -2
VPS28YPL065W BOL2P53082 120 aa2.56□□□□□ -2
VPS28YPL065W YDR249CQ03787 373 aa2.56□□□□□ -2
VPS28YPL065W MDM32Q12171 622 aa2.56□□□□□ -2
VPS28YPL065W TSC3Q3E790 80 aa2.56□□□□□ -2
VPS28YPL065W QCR7P00128 127 aa2.55□□□□□ -2
VPS28YPL065W DOC1P53068 250 aa2.55□□□□□ -2
VPS28YPL065W YNR077CP53758 84 aa2.55□□□□□ -2
VPS28YPL065W COG5P53951 403 aa2.55□□□□□ -2
VPS28YPL065W BET1P22804 142 aa2.54□□□□□ -2
VPS28YPL065W DSE2P38844 325 aa2.54□□□□□ -2
VPS28YPL065W PEP8P40335 379 aa2.54□□□□□ -2
VPS28YPL065W YNG1Q08465 219 aa2.54□□□□□ -2
VPS28YPL065W RAD9P14737 1309 aa2.53□□□□□ -2
VPS28YPL065W APA2P22108 325 aa2.53□□□□□ -2
VPS28YPL065W UMP1P38293 148 aa2.53□□□□□ -2
VPS28YPL065W SVP26P38869 228 aa2.53□□□□□ -2
VPS28YPL065W GVP36P40531 326 aaKnown RBP2.53□□□□□ -2
VPS28YPL065W EAF6P47128 113 aa2.53□□□□□ -2
VPS28YPL065W GGA1Q06336 557 aa2.53□□□□□ -2
VPS28YPL065W RPL27AP0C2H6 136 aaKnown RBP2.52□□□□□ -2.01
VPS28YPL065W URA5P13298 226 aaKnown RBP2.52□□□□□ -2.01
VPS28YPL065W RPB3P16370 318 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 74.8 ms