RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W EMC2P47133 292 aaKnown RBP0.19□□□□□ -2.38
SGF11YPL047W YMD8Q03697 442 aa0.19□□□□□ -2.38
SGF11YPL047W YDR248CQ03786 193 aa0.19□□□□□ -2.38
SGF11YPL047W LPP1Q04396 274 aa0.19□□□□□ -2.38
SGF11YPL047W YHR007C-AQ07074 71 aa0.19□□□□□ -2.38
SGF11YPL047W YOL160WQ08321 113 aa0.19□□□□□ -2.38
SGF11YPL047W TSC3Q3E790 80 aa0.19□□□□□ -2.38
SGF11YPL047W SIR2P06700 562 aa0.18□□□□□ -2.38
SGF11YPL047W YPR170W-BP0C5R9 85 aa0.18□□□□□ -2.38
SGF11YPL047W YLR156WP0CE96 114 aa0.18□□□□□ -2.38
SGF11YPL047W YLR159WP0CE97 114 aa0.18□□□□□ -2.38
SGF11YPL047W YLR161WP0CE98 114 aa0.18□□□□□ -2.38
SGF11YPL047W ATG22P25568 528 aa0.18□□□□□ -2.38
SGF11YPL047W MRPL28P36527 147 aa0.18□□□□□ -2.38
SGF11YPL047W VMA22P38784 181 aa0.18□□□□□ -2.38
SGF11YPL047W YEA4P40004 342 aa0.18□□□□□ -2.38
SGF11YPL047W GVP36P40531 326 aaKnown RBP0.18□□□□□ -2.38
SGF11YPL047W YFH7P43591 353 aa0.18□□□□□ -2.38
SGF11YPL047W SNZ1Q03148 297 aa0.18□□□□□ -2.38
SGF11YPL047W YMR252CQ04814 134 aa0.18□□□□□ -2.38
SGF11YPL047W MDM35O60200 86 aa0.17□□□□□ -2.38
SGF11YPL047W SPT3P06844 337 aa0.17□□□□□ -2.38
SGF11YPL047W SEC17P32602 292 aa0.17□□□□□ -2.38
SGF11YPL047W YBR285WP38354 144 aa0.17□□□□□ -2.38
SGF11YPL047W DOG2P38773 246 aa0.17□□□□□ -2.38
SGF11YPL047W HYR1P40581 163 aaKnown RBP0.17□□□□□ -2.38
SGF11YPL047W HOC1P47124 396 aa0.17□□□□□ -2.38
SGF11YPL047W CUE4Q04201 117 aaPredicted RBP0.17□□□□□ -2.38
SGF11YPL047W KRE28Q04431 385 aa0.17□□□□□ -2.38
SGF11YPL047W ACC1Q00955 2233 aaKnown RBP0.17□□□□□ -2.38
SGF11YPL047W TUS1Q06412 1307 aa0.16□□□□□ -2.38
SGF11YPL047W TIM9O74700 87 aa0.16□□□□□ -2.38
SGF11YPL047W BCY1P07278 416 aaKnown RBP0.16□□□□□ -2.38
SGF11YPL047W CDC10P25342 322 aaKnown RBP0.16□□□□□ -2.38
SGF11YPL047W PRX1P34227 261 aaKnown RBP0.16□□□□□ -2.38
SGF11YPL047W HPA3P39979 161 aa0.16□□□□□ -2.38
SGF11YPL047W YLR126CQ12288 251 aa0.16□□□□□ -2.38
SGF11YPL047W TCA17P32613 152 aa0.15□□□□□ -2.39
SGF11YPL047W NUP84P52891 726 aa0.15□□□□□ -2.39
SGF11YPL047W PRM8P53174 237 aa0.15□□□□□ -2.39
SGF11YPL047W RAD28Q12021 506 aa0.15□□□□□ -2.39
SGF11YPL047W MCP1Q12106 302 aa0.15□□□□□ -2.39
SGF11YPL047W MED4Q12343 284 aa0.15□□□□□ -2.39
SGF11YPL047W PRP8P33334 2413 aaKnown RBP0.15□□□□□ -2.39
SGF11YPL047W CDC36P06100 191 aaPredicted RBP0.14□□□□□ -2.39
SGF11YPL047W RPO26P20435 155 aa0.14□□□□□ -2.39
SGF11YPL047W DBF2P22204 572 aa0.14□□□□□ -2.39
SGF11YPL047W STP22P25604 385 aa0.14□□□□□ -2.39
SGF11YPL047W MRPL15P36523 253 aa0.14□□□□□ -2.39
SGF11YPL047W DIG2Q03373 323 aaKnown RBP0.14□□□□□ -2.39
SGF11YPL047W YDR391CQ04170 232 aa0.14□□□□□ -2.39
SGF11YPL047W COA3Q3E7B2 85 aa0.14□□□□□ -2.39
SGF11YPL047W MRPL25P23369 157 aa0.13□□□□□ -2.39
SGF11YPL047W UBC8P28263 218 aa0.13□□□□□ -2.39
SGF11YPL047W NTF2P33331 125 aaKnown RBP0.13□□□□□ -2.39
SGF11YPL047W UTP30P36144 274 aaKnown RBP0.13□□□□□ -2.39
SGF11YPL047W MRPL37P36532 105 aa0.13□□□□□ -2.39
SGF11YPL047W CUE1P38428 203 aa0.13□□□□□ -2.39
SGF11YPL047W PRE6P40303 254 aaKnown RBP0.13□□□□□ -2.39
SGF11YPL047W FAR7P43592 221 aa0.13□□□□□ -2.39
SGF11YPL047W UBC12P52491 188 aa0.13□□□□□ -2.39
SGF11YPL047W YLR460CP54007 376 aa0.13□□□□□ -2.39
SGF11YPL047W DAD4P69851 72 aa0.13□□□□□ -2.39
SGF11YPL047W CDC123Q05791 360 aa0.13□□□□□ -2.39
SGF11YPL047W YPR203WQ08994 102 aa0.13□□□□□ -2.39
SGF11YPL047W FMP49A0A023PZB3 126 aa0.12□□□□□ -2.39
SGF11YPL047W TCP1P12612 559 aaKnown RBP0.12□□□□□ -2.39
SGF11YPL047W URA5P13298 226 aaKnown RBP0.12□□□□□ -2.39
SGF11YPL047W OM45P16547 393 aa0.12□□□□□ -2.39
SGF11YPL047W ECM4P36156 370 aa0.12□□□□□ -2.39
SGF11YPL047W SKG1P36169 355 aa0.12□□□□□ -2.39
SGF11YPL047W YEL008WP40001 126 aa0.12□□□□□ -2.39
SGF11YPL047W RTT105P40063 208 aa0.12□□□□□ -2.39
SGF11YPL047W EAF6P47128 113 aa0.12□□□□□ -2.39
SGF11YPL047W NSA1P53136 463 aaPredicted RBP0.12□□□□□ -2.39
SGF11YPL047W YNL134CP53912 376 aaKnown RBP0.12□□□□□ -2.39
SGF11YPL047W LAP3Q01532 483 aaKnown RBP RIP-Chip data0.12□□□□□ -2.39not detected
SGF11YPL047W YDR249CQ03787 373 aa0.12□□□□□ -2.39
SGF11YPL047W YLR173WQ06247 608 aa0.12□□□□□ -2.39
SGF11YPL047W YPR174CQ06616 221 aaPredicted RBP0.12□□□□□ -2.39
SGF11YPL047W YRA1Q12159 226 aaKnown RBP0.12□□□□□ -2.39
SGF11YPL047W RRP36Q12481 300 aaPredicted RBP0.12□□□□□ -2.39
SGF11YPL047W RPL27AP0C2H6 136 aaKnown RBP0.11□□□□□ -2.39
SGF11YPL047W SPO13P23624 291 aa0.11□□□□□ -2.39
SGF11YPL047W IDH1P28834 360 aaKnown RBP RIP-Chip data0.11□□□□□ -2.39not detected
SGF11YPL047W RPB7P34087 171 aa0.11□□□□□ -2.39
SGF11YPL047W YBR242WP38331 238 aa0.11□□□□□ -2.39
SGF11YPL047W AIM25P47140 327 aa0.11□□□□□ -2.39
SGF11YPL047W TRM9P49957 279 aa0.11□□□□□ -2.39
SGF11YPL047W MRPL50P53724 139 aa0.11□□□□□ -2.39
SGF11YPL047W BNA7Q04066 261 aa0.11□□□□□ -2.39
SGF11YPL047W PAM18Q07914 168 aa0.11□□□□□ -2.39
SGF11YPL047W ATG31Q12421 196 aa0.11□□□□□ -2.39
SGF11YPL047W TDA8Q6B2U8 126 aa0.11□□□□□ -2.39
SGF11YPL047W SEC4P07560 215 aaKnown RBP0.1□□□□□ -2.39
SGF11YPL047W RPB3P16370 318 aaKnown RBP0.1□□□□□ -2.39
SGF11YPL047W PHO85P17157 305 aa0.1□□□□□ -2.39
SGF11YPL047W BET1P22804 142 aa0.1□□□□□ -2.39
SGF11YPL047W APS1P35181 156 aa0.1□□□□□ -2.39
SGF11YPL047W YPL073CP40323 161 aa0.1□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms