RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK2YNR031C DEG1P31115 442 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C SEC17P32602 292 aa1.32□□□□□ -2.2
SSK2YNR031C PDX3P38075 228 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C PAN6P40459 309 aa1.32□□□□□ -2.2
SSK2YNR031C YJL213WP40896 331 aa1.32□□□□□ -2.2
SSK2YNR031C SFH5P47008 294 aa1.32□□□□□ -2.2
SSK2YNR031C YJL118WP47022 219 aa1.32□□□□□ -2.2
SSK2YNR031C BOL2P53082 120 aa1.32□□□□□ -2.2
SSK2YNR031C RPL6AQ02326 176 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C RAD28Q12021 506 aa1.32□□□□□ -2.2
SSK2YNR031C MDM32Q12171 622 aa1.32□□□□□ -2.2
SSK2YNR031C YKL183C-AQ3E765 70 aa1.32□□□□□ -2.2
SSK2YNR031C ERD1P16151 362 aa1.32□□□□□ -2.2
SSK2YNR031C CPT1P17898 393 aa1.32□□□□□ -2.2
SSK2YNR031C SEC22P22214 214 aa1.32□□□□□ -2.2
SSK2YNR031C SLY41P22215 453 aa1.32□□□□□ -2.2
SSK2YNR031C SGV1P23293 657 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C AEP1P32493 518 aa1.32□□□□□ -2.2
SSK2YNR031C GLC7P32598 312 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C REC104P33323 182 aa1.32□□□□□ -2.2
SSK2YNR031C CBT1P36038 271 aaPredicted RBP1.32□□□□□ -2.2
SSK2YNR031C PRY2P36110 329 aa1.32□□□□□ -2.2
SSK2YNR031C BNA4P38169 460 aa1.32□□□□□ -2.2
SSK2YNR031C RPP1P38786 293 aa1.32□□□□□ -2.2
SSK2YNR031C IPI1P38803 334 aaPredicted RBP1.32□□□□□ -2.2
SSK2YNR031C HPA3P39979 161 aa1.32□□□□□ -2.2
SSK2YNR031C YND1P40009 630 aa1.32□□□□□ -2.2
SSK2YNR031C SPI1P40092 148 aa1.32□□□□□ -2.2
SSK2YNR031C RFC4P40339 323 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C LYS12P40495 371 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C SER2P42941 309 aa1.32□□□□□ -2.2
SSK2YNR031C RRT5P43607 289 aa1.32□□□□□ -2.2
SSK2YNR031C CPR7P47103 393 aa1.32□□□□□ -2.2
SSK2YNR031C BUL1P48524 976 aa1.32□□□□□ -2.2
SSK2YNR031C TOS2P50078 622 aa1.32□□□□□ -2.2
SSK2YNR031C DOC1P53068 250 aa1.32□□□□□ -2.2
SSK2YNR031C YIP5P53108 310 aa1.32□□□□□ -2.2
SSK2YNR031C YGL101WP53144 215 aa1.32□□□□□ -2.2
SSK2YNR031C TVP18Q04767 167 aa1.32□□□□□ -2.2
SSK2YNR031C RCL1Q08096 367 aaPredicted RBP1.32□□□□□ -2.2
SSK2YNR031C SRL1Q08673 210 aa1.32□□□□□ -2.2
SSK2YNR031C ENV7Q12003 364 aa1.32□□□□□ -2.2
SSK2YNR031C FSF1Q12029 327 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C PRR2Q12310 699 aa1.32□□□□□ -2.2
SSK2YNR031C YPL229WQ99395 206 aa1.32□□□□□ -2.2
SSK2YNR031C YPR010C-AA5Z2X5 72 aa1.32□□□□□ -2.2
SSK2YNR031C MF(ALPHA)1P01149 165 aa1.32□□□□□ -2.2
SSK2YNR031C ERG4P25340 473 aa1.32□□□□□ -2.2
SSK2YNR031C LDB7P38210 180 aa1.32□□□□□ -2.2
SSK2YNR031C YPT31P38555 223 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C YHR127WP38833 243 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C SPO73P40031 143 aa1.32□□□□□ -2.2
SSK2YNR031C RRG9P40156 214 aa1.32□□□□□ -2.2
SSK2YNR031C SKI6P46948 246 aaPredicted RBP1.32□□□□□ -2.2
SSK2YNR031C MCM22P47167 239 aa1.32□□□□□ -2.2
SSK2YNR031C UBC13P52490 153 aa1.32□□□□□ -2.2
SSK2YNR031C ERG26P53199 349 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C MTL1P53214 551 aa1.32□□□□□ -2.2
SSK2YNR031C OCA2P53949 197 aa1.32□□□□□ -2.2
SSK2YNR031C NRG1Q03125 231 aa1.32□□□□□ -2.2
SSK2YNR031C YMR295CQ03559 197 aa1.32□□□□□ -2.2
SSK2YNR031C CAB5Q03941 241 aa1.32□□□□□ -2.2
SSK2YNR031C YDR415CQ04033 374 aaPredicted RBP1.32□□□□□ -2.2
SSK2YNR031C YMR087WQ04299 284 aa1.32□□□□□ -2.2
SSK2YNR031C YOL131WQ08270 108 aa1.32□□□□□ -2.2
SSK2YNR031C HRT1Q08273 121 aa1.32□□□□□ -2.2
SSK2YNR031C YOP1Q12402 180 aa1.32□□□□□ -2.2
SSK2YNR031C RPS21BQ3E754 87 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C BOL1Q3E793 110 aa1.32□□□□□ -2.2
SSK2YNR031C ECM3Q99252 613 aa1.32□□□□□ -2.2
SSK2YNR031C ATG40Q99325 256 aa1.32□□□□□ -2.2
SSK2YNR031C RPL15AP05748 204 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C MRPS5P33759 307 aa1.32□□□□□ -2.2
SSK2YNR031C LSM2P38203 95 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C COS8P38723 381 aa1.32□□□□□ -2.2
SSK2YNR031C APQ12P40532 138 aa1.32□□□□□ -2.2
SSK2YNR031C ATG27P46989 271 aa1.32□□□□□ -2.2
SSK2YNR031C YJR012CP47087 207 aa1.32□□□□□ -2.2
SSK2YNR031C YPT32P51996 222 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C PMT5P52867 743 aa1.32□□□□□ -2.2
SSK2YNR031C YNL010WP53981 241 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C RPL15BP54780 204 aaPredicted RBP1.32□□□□□ -2.2
SSK2YNR031C PKR1Q03880 122 aaKnown RBP1.32□□□□□ -2.2
SSK2YNR031C UPS3Q04006 179 aa1.32□□□□□ -2.2
SSK2YNR031C SHH3Q04487 196 aa1.32□□□□□ -2.2
SSK2YNR031C GAL83Q04739 417 aa1.32□□□□□ -2.2
SSK2YNR031C ATG39Q06159 398 aa1.32□□□□□ -2.2
SSK2YNR031C YDL177CQ12257 170 aa1.32□□□□□ -2.2
SSK2YNR031C ORT1Q12375 292 aa1.32□□□□□ -2.2
SSK2YNR031C TFB5Q3E7C1 72 aaPredicted RBP1.32□□□□□ -2.2
SSK2YNR031C ART10P18634 518 aaKnown RBP1.31□□□□□ -2.2
SSK2YNR031C VMA3P25515 160 aa1.31□□□□□ -2.2
SSK2YNR031C IDH1P28834 360 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
SSK2YNR031C PEX4P29340 183 aa1.31□□□□□ -2.2
SSK2YNR031C APS1P35181 156 aa1.31□□□□□ -2.2
SSK2YNR031C MRPL4P36517 319 aa1.31□□□□□ -2.2
SSK2YNR031C DER1P38307 211 aa1.31□□□□□ -2.2
SSK2YNR031C SLM6P38343 150 aa1.31□□□□□ -2.2
SSK2YNR031C RCK1P38622 512 aa1.31□□□□□ -2.2
SSK2YNR031C INM1P38710 295 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms