RNA–Protein interactions for RNA: YNR023W

SNF12, Transcript of 73 kDa subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF12, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF12YNR023W YPR170W-BP0C5R9 85 aa1.61□□□□□ -2.15
SNF12YNR023W DBF2P22204 572 aa1.61□□□□□ -2.15
SNF12YNR023W IDH1P28834 360 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
SNF12YNR023W MDH3P32419 343 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
SNF12YNR023W YGR219WP53307 113 aa1.61□□□□□ -2.15
SNF12YNR023W LPP1Q04396 274 aa1.61□□□□□ -2.15
SNF12YNR023W NEJ1Q06148 342 aa1.61□□□□□ -2.15
SNF12YNR023W ARR2Q06597 130 aa1.61□□□□□ -2.15
SNF12YNR023W ATO3Q12359 275 aa1.61□□□□□ -2.15
SNF12YNR023W PSF1Q12488 208 aa1.61□□□□□ -2.15
SNF12YNR023W YDR157WA0A023PZE8 133 aa1.6□□□□□ -2.15
SNF12YNR023W JIP3O13555 125 aa1.6□□□□□ -2.15
SNF12YNR023W CDC8P00572 216 aa1.6□□□□□ -2.15
SNF12YNR023W ATG22P25568 528 aa1.6□□□□□ -2.15
SNF12YNR023W PEX4P29340 183 aa1.6□□□□□ -2.15
SNF12YNR023W MGM101P32787 269 aaKnown RBP1.6□□□□□ -2.15
SNF12YNR023W SIP3P38717 1229 aa1.6□□□□□ -2.15
SNF12YNR023W IKI1P38874 309 aa1.6□□□□□ -2.15
SNF12YNR023W DAN1P47178 298 aa1.6□□□□□ -2.15
SNF12YNR023W PDR17P53844 350 aa1.6□□□□□ -2.15
SNF12YNR023W ATG2P53855 1592 aa1.6□□□□□ -2.15
SNF12YNR023W GCN3P14741 305 aa1.6□□□□□ -2.15
SNF12YNR023W POP4P38336 279 aa1.6□□□□□ -2.15
SNF12YNR023W RFC4P40339 323 aaKnown RBP1.6□□□□□ -2.15
SNF12YNR023W CIS3P47001 227 aa1.6□□□□□ -2.15
SNF12YNR023W CUS2P53830 285 aaPredicted RBP1.6□□□□□ -2.15
SNF12YNR023W GRX3Q03835 250 aa1.6□□□□□ -2.15
SNF12YNR023W REP2P03872 296 aa1.59□□□□□ -2.16
SNF12YNR023W FBA1P14540 359 aaKnown RBP1.59□□□□□ -2.16
SNF12YNR023W OAC1P32332 324 aa1.59□□□□□ -2.16
SNF12YNR023W TCA17P32613 152 aa1.59□□□□□ -2.16
SNF12YNR023W TAF14P35189 244 aa1.59□□□□□ -2.16
SNF12YNR023W NRG2P38082 220 aa1.59□□□□□ -2.16
SNF12YNR023W MRPS8Q03799 155 aa1.59□□□□□ -2.16
SNF12YNR023W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.59□□□□□ -2.16not detected
SNF12YNR023W USB1Q12208 290 aaKnown RBP1.59□□□□□ -2.16
SNF12YNR023W HTB1P02293 131 aaKnown RBP1.58□□□□□ -2.16
SNF12YNR023W HTB2P02294 131 aa1.58□□□□□ -2.16
SNF12YNR023W SCL1P21243 252 aaKnown RBP1.58□□□□□ -2.16
SNF12YNR023W SKG1P36169 355 aa1.58□□□□□ -2.16
SNF12YNR023W MRPL28P36527 147 aa1.58□□□□□ -2.16
SNF12YNR023W ERV15P38312 142 aa1.58□□□□□ -2.16
SNF12YNR023W TRM5P38793 499 aa1.58□□□□□ -2.16
SNF12YNR023W YHR180WP38868 163 aa1.58□□□□□ -2.16
SNF12YNR023W YKE4P40544 346 aa1.58□□□□□ -2.16
SNF12YNR023W SNZ1Q03148 297 aa1.58□□□□□ -2.16
SNF12YNR023W MRPS17Q03246 237 aaPredicted RBP1.58□□□□□ -2.16
SNF12YNR023W GET4Q12125 312 aa1.58□□□□□ -2.16
SNF12YNR023W YRA1Q12159 226 aaKnown RBP1.58□□□□□ -2.16
SNF12YNR023W SEC4P07560 215 aaKnown RBP1.57□□□□□ -2.16
SNF12YNR023W MEI4P29467 408 aa1.57□□□□□ -2.16
SNF12YNR023W YCR087C-AP37263 153 aa1.57□□□□□ -2.16
SNF12YNR023W PHO88P38264 188 aaPredicted RBP1.57□□□□□ -2.16
SNF12YNR023W PRM10P42946 383 aa1.57□□□□□ -2.16
SNF12YNR023W YJL027CP47063 138 aaPredicted RBP1.57□□□□□ -2.16
SNF12YNR023W AIF1P52923 378 aa1.57□□□□□ -2.16
SNF12YNR023W ERG25P53045 309 aa1.57□□□□□ -2.16
SNF12YNR023W TRM12Q04235 462 aa1.57□□□□□ -2.16
SNF12YNR023W BOL1Q3E793 110 aa1.57□□□□□ -2.16
SNF12YNR023W TDA8Q6B2U8 126 aa1.57□□□□□ -2.16
SNF12YNR023W TUS1Q06412 1307 aa1.57□□□□□ -2.16
SNF12YNR023W CHD1P32657 1468 aa1.57□□□□□ -2.16
SNF12YNR023W YLR156WP0CE96 114 aa1.57□□□□□ -2.16
SNF12YNR023W YLR159WP0CE97 114 aa1.57□□□□□ -2.16
SNF12YNR023W YLR161WP0CE98 114 aa1.57□□□□□ -2.16
SNF12YNR023W RFA3P26755 122 aaKnown RBP1.57□□□□□ -2.16
SNF12YNR023W RMD6P39975 231 aa1.57□□□□□ -2.16
SNF12YNR023W FCY21P40039 528 aa1.57□□□□□ -2.16
SNF12YNR023W PGD1P40356 397 aa1.57□□□□□ -2.16
SNF12YNR023W GET1P53192 235 aa1.57□□□□□ -2.16
SNF12YNR023W ABP140Q08641 628 aaKnown RBP1.57□□□□□ -2.16
SNF12YNR023W YPK9Q12697 1472 aa1.57□□□□□ -2.16
SNF12YNR023W RPL25P04456 142 aaKnown RBP1.56□□□□□ -2.16
SNF12YNR023W CDC7P06243 507 aa1.56□□□□□ -2.16
SNF12YNR023W MATALPHA2P0CY08 210 aa1.56□□□□□ -2.16
SNF12YNR023W HMLALPHA2P0CY09 210 aa1.56□□□□□ -2.16
SNF12YNR023W ICE2P40499 491 aa1.56□□□□□ -2.16
SNF12YNR023W LSM7P53905 115 aaKnown RBP1.56□□□□□ -2.16
SNF12YNR023W SWP1Q02795 286 aa1.56□□□□□ -2.16
SNF12YNR023W GAS3Q03655 524 aa1.56□□□□□ -2.16
SNF12YNR023W MDM32Q12171 622 aa1.56□□□□□ -2.16
SNF12YNR023W TSC3Q3E790 80 aa1.56□□□□□ -2.16
SNF12YNR023W TRM732Q03496 1420 aa1.55□□□□□ -2.16
SNF12YNR023W YPR117WQ06116 2489 aa1.55□□□□□ -2.16
SNF12YNR023W VPS15P22219 1454 aa1.55□□□□□ -2.16
SNF12YNR023W MER1P16523 270 aa1.55□□□□□ -2.16
SNF12YNR023W CBF1P17106 351 aa1.55□□□□□ -2.16
SNF12YNR023W MRPS28P21771 286 aa1.55□□□□□ -2.16
SNF12YNR023W MAG1P22134 296 aaKnown RBP1.55□□□□□ -2.16
SNF12YNR023W SEC17P32602 292 aa1.55□□□□□ -2.16
SNF12YNR023W SVP26P38869 228 aa1.55□□□□□ -2.16
SNF12YNR023W AST2P39945 430 aaKnown RBP1.55□□□□□ -2.16
SNF12YNR023W BMT5P40493 336 aa1.55□□□□□ -2.16
SNF12YNR023W RPL33BP41056 107 aaKnown RBP1.55□□□□□ -2.16
SNF12YNR023W YGR050CP53231 118 aa1.55□□□□□ -2.16
SNF12YNR023W YNR062CP53748 327 aa1.55□□□□□ -2.16
SNF12YNR023W YHR086W-AQ3E746 53 aa1.55□□□□□ -2.16
SNF12YNR023W KSS1P14681 368 aa1.54□□□□□ -2.16
SNF12YNR023W PET9P18239 318 aaKnown RBP1.54□□□□□ -2.16
SNF12YNR023W SPS18P32572 300 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms