RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeastyeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDP1YNL039W DER1P38307 211 aa3.51□□□□□ -1.85
BDP1YNL039W LSM4P40070 187 aaKnown RBP3.51□□□□□ -1.85
BDP1YNL039W PRE5P40302 234 aaKnown RBP3.51□□□□□ -1.85
BDP1YNL039W FLC3P53121 802 aa3.51□□□□□ -1.85
BDP1YNL039W PIN3Q06449 215 aa3.51□□□□□ -1.85
BDP1YNL039W NSL1Q12143 216 aa3.51□□□□□ -1.85
BDP1YNL039W COS8P38723 381 aa3.51□□□□□ -1.85
BDP1YNL039W NVJ1P38881 321 aa3.51□□□□□ -1.85
BDP1YNL039W FMP32P43557 207 aa3.51□□□□□ -1.85
BDP1YNL039W YLR053CQ12026 108 aa3.51□□□□□ -1.85
BDP1YNL039W BBP1Q12365 385 aa3.51□□□□□ -1.85
BDP1YNL039W SGA1P08019 549 aa3.5□□□□□ -1.85
BDP1YNL039W SRP102P36057 244 aaPredicted RBP3.5□□□□□ -1.85
BDP1YNL039W AST2P39945 430 aaKnown RBP3.5□□□□□ -1.85
BDP1YNL039W FIS1P40515 155 aa3.5□□□□□ -1.85
BDP1YNL039W YFL012WP43580 148 aa3.5□□□□□ -1.85
BDP1YNL039W YFH7P43591 353 aa3.5□□□□□ -1.85
BDP1YNL039W LSM1P47017 172 aaKnown RBP3.5□□□□□ -1.85
BDP1YNL039W ALG9P53868 555 aaKnown RBP3.5□□□□□ -1.85
BDP1YNL039W PET20Q99373 253 aa3.5□□□□□ -1.85
BDP1YNL039W RPS28BP0C0X0 67 aaKnown RBP3.49□□□□□ -1.85
BDP1YNL039W YPR170W-BP0C5R9 85 aa3.49□□□□□ -1.85
BDP1YNL039W RPS24AP0CX31 135 aaKnown RBP3.49□□□□□ -1.85
BDP1YNL039W RPS24BP0CX32 135 aaKnown RBP3.49□□□□□ -1.85
BDP1YNL039W CNB1P25296 175 aa3.49□□□□□ -1.85
BDP1YNL039W YCR090CP25654 182 aaKnown RBP3.49□□□□□ -1.85
BDP1YNL039W UTH1P36135 365 aa3.49□□□□□ -1.85
BDP1YNL039W EDC3P39998 551 aaKnown RBP3.49□□□□□ -1.85
BDP1YNL039W YFR045WP43617 309 aa3.49□□□□□ -1.85
BDP1YNL039W GAS3Q03655 524 aa3.49□□□□□ -1.85
BDP1YNL039W RIO1Q12196 484 aaKnown RBP3.49□□□□□ -1.85
BDP1YNL039W PEX11Q12462 236 aa3.49□□□□□ -1.85
BDP1YNL039W RPS28AQ3E7X9 67 aaPredicted RBP3.49□□□□□ -1.85
BDP1YNL039W MBF1O14467 151 aaKnown RBP3.48□□□□□ -1.85
BDP1YNL039W YAR068WP39564 161 aa3.48□□□□□ -1.85
BDP1YNL039W GLE2P40066 365 aa3.48□□□□□ -1.85
BDP1YNL039W SBH2P52871 88 aa3.48□□□□□ -1.85
BDP1YNL039W MIG2P53035 382 aa3.48□□□□□ -1.85
BDP1YNL039W FCF1Q05498 189 aaPredicted RBP3.48□□□□□ -1.85
BDP1YNL039W RDI1Q12434 202 aa3.48□□□□□ -1.85
BDP1YNL039W AHC2P25649 128 aa3.48□□□□□ -1.85
BDP1YNL039W RSM25P40496 264 aa3.48□□□□□ -1.85
BDP1YNL039W HST4P53688 370 aa3.48□□□□□ -1.85
BDP1YNL039W SUE1Q06524 206 aa3.48□□□□□ -1.85
BDP1YNL039W YPL162CQ12042 273 aa3.48□□□□□ -1.85
BDP1YNL039W CMD1P06787 147 aaKnown RBP3.47□□□□□ -1.85
BDP1YNL039W SEC14P24280 304 aaKnown RBP3.47□□□□□ -1.85
BDP1YNL039W ATG22P25568 528 aa3.47□□□□□ -1.85
BDP1YNL039W POP4P38336 279 aa3.47□□□□□ -1.85
BDP1YNL039W YGP1P38616 354 aaKnown RBP3.47□□□□□ -1.85
BDP1YNL039W SNM1P40993 198 aa3.47□□□□□ -1.85
BDP1YNL039W RSM10Q03201 203 aa3.47□□□□□ -1.85
BDP1YNL039W AIM34Q03673 198 aa3.47□□□□□ -1.85
BDP1YNL039W ADH3P07246 375 aaKnown RBP3.46□□□□□ -1.86
BDP1YNL039W UTP30P36144 274 aaKnown RBP3.46□□□□□ -1.86
BDP1YNL039W YDC1Q02896 317 aa3.46□□□□□ -1.86
BDP1YNL039W PLP1Q04004 230 aa3.46□□□□□ -1.86
BDP1YNL039W HPT1Q04178 221 aaKnown RBP3.46□□□□□ -1.86
BDP1YNL039W ATG39Q06159 398 aa3.46□□□□□ -1.86
BDP1YNL039W SHH4Q06236 168 aa3.46□□□□□ -1.86
BDP1YNL039W YFR032C-BQ8TGU2 87 aa3.46□□□□□ -1.86
BDP1YNL039W YIL177CP40434 1758 aa3.46□□□□□ -1.86
BDP1YNL039W YJL225CP40889 1758 aa3.46□□□□□ -1.86
BDP1YNL039W RAD10P06838 210 aa3.46□□□□□ -1.86
BDP1YNL039W SEC17P32602 292 aa3.46□□□□□ -1.86
BDP1YNL039W KDX1P36005 433 aa3.46□□□□□ -1.86
BDP1YNL039W SKG1P36169 355 aa3.46□□□□□ -1.86
BDP1YNL039W MRPS9P38120 278 aa3.46□□□□□ -1.86
BDP1YNL039W PFS2P42841 465 aaKnown RBP3.46□□□□□ -1.86
BDP1YNL039W OST2P46964 130 aa3.46□□□□□ -1.86
BDP1YNL039W ARP3P47117 449 aaKnown RBP3.46□□□□□ -1.86
BDP1YNL039W NQM1P53228 333 aaPredicted RBP3.46□□□□□ -1.86
BDP1YNL039W YDR249CQ03787 373 aa3.46□□□□□ -1.86
BDP1YNL039W SCO1P23833 295 aa3.45□□□□□ -1.86
BDP1YNL039W ECO1P43605 281 aa3.45□□□□□ -1.86
BDP1YNL039W ARO8P53090 500 aaKnown RBP3.45□□□□□ -1.86
BDP1YNL039W COS6P53344 381 aa3.45□□□□□ -1.86
BDP1YNL039W DYN3Q04949 312 aa3.45□□□□□ -1.86
BDP1YNL039W ICE2P40499 491 aa3.44□□□□□ -1.86
BDP1YNL039W YLR031WQ07978 186 aa3.44□□□□□ -1.86
BDP1YNL039W MHT1Q12525 324 aa3.44□□□□□ -1.86
BDP1YNL039W YLR156WP0CE96 114 aa3.43□□□□□ -1.86
BDP1YNL039W YLR159WP0CE97 114 aa3.43□□□□□ -1.86
BDP1YNL039W YLR161WP0CE98 114 aa3.43□□□□□ -1.86
BDP1YNL039W PET9P18239 318 aaKnown RBP3.43□□□□□ -1.86
BDP1YNL039W YHR125WP38831 101 aa3.43□□□□□ -1.86
BDP1YNL039W ARC15P40518 154 aaRIP-Chip data3.43□□□□□ -1.86not detected
BDP1YNL039W MAK3Q03503 176 aa3.43□□□□□ -1.86
BDP1YNL039W GPI17Q04080 534 aa3.43□□□□□ -1.86
BDP1YNL039W YPR063CQ12160 140 aa3.43□□□□□ -1.86
BDP1YNL039W PSF1Q12488 208 aa3.43□□□□□ -1.86
BDP1YNL039W FKS1P38631 1876 aaKnown RBP3.43□□□□□ -1.86
BDP1YNL039W REP2P03872 296 aa3.43□□□□□ -1.86
BDP1YNL039W HIS3P06633 220 aa3.43□□□□□ -1.86
BDP1YNL039W TKL2P33315 681 aa3.43□□□□□ -1.86
BDP1YNL039W YKL102CP34249 101 aa3.43□□□□□ -1.86
BDP1YNL039W SOK1P40317 901 aa3.43□□□□□ -1.86
BDP1YNL039W APJ1P53940 528 aa3.43□□□□□ -1.86
BDP1YNL039W HSK3P69852 69 aa3.43□□□□□ -1.86
BDP1YNL039W HNT1Q04344 158 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms