RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C YLR161WP0CE98 114 aa2.93□□□□□ -1.94
CTF18YMR078C IDH1P28834 360 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
CTF18YMR078C YCR087C-AP37263 153 aa2.93□□□□□ -1.94
CTF18YMR078C DAD3P69850 94 aa2.93□□□□□ -1.94
CTF18YMR078C PRM15Q03262 622 aa2.93□□□□□ -1.94
CTF18YMR078C GAS3Q03655 524 aa2.93□□□□□ -1.94
CTF18YMR078C SEC17P32602 292 aa2.93□□□□□ -1.94
CTF18YMR078C YGR219WP53307 113 aa2.93□□□□□ -1.94
CTF18YMR078C MRPS17Q03246 237 aaPredicted RBP2.93□□□□□ -1.94
CTF18YMR078C HTB1P02293 131 aaKnown RBP2.92□□□□□ -1.94
CTF18YMR078C HTB2P02294 131 aa2.92□□□□□ -1.94
CTF18YMR078C YHR214C-EQ8TGK0 99 aa2.92□□□□□ -1.94
CTF18YMR078C CDC7P06243 507 aa2.92□□□□□ -1.94
CTF18YMR078C UTP30P36144 274 aaKnown RBP2.92□□□□□ -1.94
CTF18YMR078C POP4P38336 279 aa2.92□□□□□ -1.94
CTF18YMR078C BMT5P40493 336 aa2.92□□□□□ -1.94
CTF18YMR078C CIS3P47001 227 aa2.92□□□□□ -1.94
CTF18YMR078C YGR050CP53231 118 aa2.92□□□□□ -1.94
CTF18YMR078C CBF1P17106 351 aa2.91□□□□□ -1.94
CTF18YMR078C ATG22P25568 528 aa2.91□□□□□ -1.94
CTF18YMR078C MEI4P29467 408 aa2.91□□□□□ -1.94
CTF18YMR078C RFC4P40339 323 aaKnown RBP2.91□□□□□ -1.94
CTF18YMR078C YRA1Q12159 226 aaKnown RBP2.91□□□□□ -1.94
CTF18YMR078C MATALPHA2P0CY08 210 aa2.91□□□□□ -1.94
CTF18YMR078C HMLALPHA2P0CY09 210 aa2.91□□□□□ -1.94
CTF18YMR078C MGM101P32787 269 aaKnown RBP2.91□□□□□ -1.94
CTF18YMR078C PHO88P38264 188 aaPredicted RBP2.91□□□□□ -1.94
CTF18YMR078C GET4Q12125 312 aa2.91□□□□□ -1.94
CTF18YMR078C YNR062CP53748 327 aa2.9□□□□□ -1.95
CTF18YMR078C MER1P16523 270 aa2.89□□□□□ -1.95
CTF18YMR078C AIF1P52923 378 aa2.89□□□□□ -1.95
CTF18YMR078C YMR226CQ05016 267 aaKnown RBP2.89□□□□□ -1.95
CTF18YMR078C MCP1Q12106 302 aa2.89□□□□□ -1.95
CTF18YMR078C ERV15P38312 142 aa2.89□□□□□ -1.95
CTF18YMR078C NOP19P53317 196 aaPredicted RBP2.89□□□□□ -1.95
CTF18YMR078C FBA1P14540 359 aaKnown RBP2.88□□□□□ -1.95
CTF18YMR078C CGR1P53188 120 aa2.88□□□□□ -1.95
CTF18YMR078C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
CTF18YMR078C ABP140Q08641 628 aaKnown RBP2.88□□□□□ -1.95
CTF18YMR078C YKE4P40544 346 aa2.88□□□□□ -1.95
CTF18YMR078C LSM7P53905 115 aaKnown RBP2.88□□□□□ -1.95
CTF18YMR078C PTM1P32857 523 aa2.87□□□□□ -1.95
CTF18YMR078C SNZ1Q03148 297 aa2.87□□□□□ -1.95
CTF18YMR078C YNG1Q08465 219 aa2.87□□□□□ -1.95
CTF18YMR078C SWP1Q02795 286 aa2.87□□□□□ -1.95
CTF18YMR078C YDR249CQ03787 373 aa2.87□□□□□ -1.95
CTF18YMR078C GGA1Q06336 557 aa2.87□□□□□ -1.95
CTF18YMR078C YPL162CQ12042 273 aa2.87□□□□□ -1.95
CTF18YMR078C YFR032C-BQ8TGU2 87 aa2.87□□□□□ -1.95
CTF18YMR078C QCR7P00128 127 aa2.86□□□□□ -1.95
CTF18YMR078C PET9P18239 318 aaKnown RBP2.86□□□□□ -1.95
CTF18YMR078C MRPL28P36527 147 aa2.86□□□□□ -1.95
CTF18YMR078C PGD1P40356 397 aa2.86□□□□□ -1.95
CTF18YMR078C YOL160WQ08321 113 aa2.86□□□□□ -1.95
CTF18YMR078C USB1Q12208 290 aaKnown RBP2.86□□□□□ -1.95
CTF18YMR078C DDI2P0CH63 225 aa2.85□□□□□ -1.95
CTF18YMR078C DDI3P0CH64 225 aa2.85□□□□□ -1.95
CTF18YMR078C MRPL17P36528 281 aa2.85□□□□□ -1.95
CTF18YMR078C CYT2Q00873 224 aa2.85□□□□□ -1.95
CTF18YMR078C APA2P22108 325 aa2.85□□□□□ -1.95
CTF18YMR078C YHR022CP38763 256 aa2.85□□□□□ -1.95
CTF18YMR078C YRB2P40517 327 aa2.85□□□□□ -1.95
CTF18YMR078C RPL33BP41056 107 aaKnown RBP2.84□□□□□ -1.95
CTF18YMR078C DOC1P53068 250 aa2.84□□□□□ -1.95
CTF18YMR078C BOL2P53082 120 aa2.84□□□□□ -1.95
CTF18YMR078C COG5P53951 403 aa2.84□□□□□ -1.95
CTF18YMR078C YPK2P18961 677 aa2.84□□□□□ -1.96
CTF18YMR078C RMD6P39975 231 aa2.84□□□□□ -1.96
CTF18YMR078C ICE2P40499 491 aa2.84□□□□□ -1.96
CTF18YMR078C KSS1P14681 368 aa2.83□□□□□ -1.96
CTF18YMR078C GET1P53192 235 aa2.83□□□□□ -1.96
CTF18YMR078C TSC3Q3E790 80 aa2.83□□□□□ -1.96
CTF18YMR078C RPL27BP0C2H7 136 aaKnown RBP2.83□□□□□ -1.96
CTF18YMR078C AST2P39945 430 aaKnown RBP2.83□□□□□ -1.96
CTF18YMR078C AYR1P40471 297 aa2.83□□□□□ -1.96
CTF18YMR078C TIM9O74700 87 aa2.82□□□□□ -1.96
CTF18YMR078C TIR3P40552 269 aa2.82□□□□□ -1.96
CTF18YMR078C TRM5P38793 499 aa2.81□□□□□ -1.96
CTF18YMR078C AIM25P47140 327 aa2.81□□□□□ -1.96
CTF18YMR078C YNR077CP53758 84 aa2.81□□□□□ -1.96
CTF18YMR078C ADE1P27616 306 aa2.81□□□□□ -1.96
CTF18YMR078C YIL177CP40434 1758 aa2.81□□□□□ -1.96
CTF18YMR078C YJL225CP40889 1758 aa2.81□□□□□ -1.96
CTF18YMR078C RPL25P04456 142 aaKnown RBP2.8□□□□□ -1.96
CTF18YMR078C SVP26P38869 228 aa2.8□□□□□ -1.96
CTF18YMR078C RAD9P14737 1309 aa2.8□□□□□ -1.96
CTF18YMR078C RPB3P16370 318 aaKnown RBP2.8□□□□□ -1.96
CTF18YMR078C ATP15P21306 62 aa2.8□□□□□ -1.96
CTF18YMR078C SKG1P36169 355 aa2.8□□□□□ -1.96
CTF18YMR078C BOL1Q3E793 110 aa2.8□□□□□ -1.96
CTF18YMR078C MAG1P22134 296 aaKnown RBP2.79□□□□□ -1.96
CTF18YMR078C UMP1P38293 148 aa2.79□□□□□ -1.96
CTF18YMR078C AGE2P40529 298 aa2.79□□□□□ -1.96
CTF18YMR078C ERG25P53045 309 aa2.79□□□□□ -1.96
CTF18YMR078C MMS2P53152 137 aa2.79□□□□□ -1.96
CTF18YMR078C BET1P22804 142 aa2.78□□□□□ -1.96
CTF18YMR078C GVP36P40531 326 aaKnown RBP2.78□□□□□ -1.96
CTF18YMR078C MDM32Q12171 622 aa2.78□□□□□ -1.96
CTF18YMR078C PDR18P53756 1333 aa2.78□□□□□ -1.96
CTF18YMR078C MRS1P07266 363 aa2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms