RNA–Protein interactions for RNA: YKR065C

PAM17, Transcript of Constituent of the TIM23 complex, yeast

Gene PAM17, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM17	YKR065C	YLR283W	Q05867	314 aa		6.14	□□□□□ -1.43
PAM17	YKR065C	FSH3	Q99369	266 aa		6.14	□□□□□ -1.43
PAM17	YKR065C	RPL25	P04456	142 aa	Known RBP	6.13	□□□□□ -1.43
PAM17	YKR065C	SPS100	P13130	326 aa		6.13	□□□□□ -1.43
PAM17	YKR065C	PCL1	P24867	279 aa		6.13	□□□□□ -1.43
PAM17	YKR065C	IFM1	P25038	676 aa		6.13	□□□□□ -1.43
PAM17	YKR065C	HTD2	P38790	280 aa	Known RBP	6.13	□□□□□ -1.43
PAM17	YKR065C	AIM25	P47140	327 aa		6.13	□□□□□ -1.43
PAM17	YKR065C	SSN8	P47821	323 aa		6.13	□□□□□ -1.43
PAM17	YKR065C	BXI1	P48558	297 aa		6.13	□□□□□ -1.43
PAM17	YKR065C	SBH2	P52871	88 aa		6.13	□□□□□ -1.43
PAM17	YKR065C	ARO8	P53090	500 aa	Known RBP	6.13	□□□□□ -1.43
PAM17	YKR065C	MRH4	P53166	561 aa		6.13	□□□□□ -1.43
PAM17	YKR065C	SKO1	Q02100	647 aa		6.13	□□□□□ -1.43
PAM17	YKR065C	KEI1	Q06346	221 aa		6.13	□□□□□ -1.43
PAM17	YKR065C	ASR1	Q06834	288 aa		6.13	□□□□□ -1.43
PAM17	YKR065C	GRC3	Q07845	632 aa		6.13	□□□□□ -1.43
PAM17	YKR065C	NCE102	Q12207	173 aa	RIP-Chip data	6.13	□□□□□ -1.43	not detected
PAM17	YKR065C	MNS1	P32906	549 aa		6.12	□□□□□ -1.43
PAM17	YKR065C	MRPL36	P36531	177 aa		6.12	□□□□□ -1.43
PAM17	YKR065C	HPA3	P39979	161 aa		6.12	□□□□□ -1.43
PAM17	YKR065C	YER079W	P40052	210 aa	Known RBP	6.12	□□□□□ -1.43
PAM17	YKR065C	LSM1	P47017	172 aa	Known RBP	6.12	□□□□□ -1.43
PAM17	YKR065C	CWC23	P52868	283 aa	Predicted RBP	6.12	□□□□□ -1.43
PAM17	YKR065C	LSM7	P53905	115 aa	Known RBP	6.12	□□□□□ -1.43
PAM17	YKR065C	ODC2	Q99297	307 aa		6.12	□□□□□ -1.43
PAM17	YKR065C	CDC23	P16522	626 aa		6.11	□□□□□ -1.43
PAM17	YKR065C	DAL80	P26343	269 aa		6.11	□□□□□ -1.43
PAM17	YKR065C	PRS2	P38620	318 aa	Known RBP	6.11	□□□□□ -1.43
PAM17	YKR065C	YER121W	P40076	114 aa		6.11	□□□□□ -1.43
PAM17	YKR065C	CCS1	P40202	249 aa	Known RBP	6.11	□□□□□ -1.43
PAM17	YKR065C	MRX5	P47007	382 aa		6.11	□□□□□ -1.43
PAM17	YKR065C	PHB2	P50085	310 aa		6.11	□□□□□ -1.43
PAM17	YKR065C	UFD1	P53044	361 aa		6.11	□□□□□ -1.43
PAM17	YKR065C	YMR279C	Q03263	540 aa		6.11	□□□□□ -1.43
PAM17	YKR065C	UTP15	Q04305	513 aa	Known RBP	6.11	□□□□□ -1.43
PAM17	YKR065C	UPS1	Q05776	175 aa		6.11	□□□□□ -1.43
PAM17	YKR065C	LIP2	Q06005	328 aa		6.11	□□□□□ -1.43
PAM17	YKR065C	HEM25	Q07534	307 aa		6.11	□□□□□ -1.43
PAM17	YKR065C	YOR186W	Q08560	144 aa		6.11	□□□□□ -1.43
PAM17	YKR065C	FCY22	Q12119	530 aa		6.11	□□□□□ -1.43
PAM17	YKR065C	INP53	Q12271	1107 aa		6.11	□□□□□ -1.43
PAM17	YKR065C	HTZ1	Q12692	134 aa	Known RBP	6.11	□□□□□ -1.43
PAM17	YKR065C	PET54	P10834	293 aa		6.1	□□□□□ -1.43
PAM17	YKR065C	APA2	P22108	325 aa		6.1	□□□□□ -1.43
PAM17	YKR065C	VMA5	P31412	392 aa	Known RBP	6.1	□□□□□ -1.43
PAM17	YKR065C	YBL010C	P32788	280 aa		6.1	□□□□□ -1.43
PAM17	YKR065C	NPL6	P32832	435 aa		6.1	□□□□□ -1.43
PAM17	YKR065C	YOX1	P34161	385 aa		6.1	□□□□□ -1.43
PAM17	YKR065C	YKL187C	P34231	750 aa		6.1	□□□□□ -1.43
PAM17	YKR065C	BMT5	P40493	336 aa		6.1	□□□□□ -1.43
PAM17	YKR065C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	6.1	□□□□□ -1.43	not detected
PAM17	YKR065C	ABM1	P47146	123 aa		6.1	□□□□□ -1.43
PAM17	YKR065C	SED1	Q01589	338 aa		6.1	□□□□□ -1.43
PAM17	YKR065C	ECM18	Q04623	453 aa		6.1	□□□□□ -1.43
PAM17	YKR065C	CDC39	P25655	2108 aa	Known RBP	6.1	□□□□□ -1.43
PAM17	YKR065C	PEX4	P29340	183 aa		6.09	□□□□□ -1.43
PAM17	YKR065C	ARO4	P32449	370 aa	Known RBP	6.09	□□□□□ -1.43
PAM17	YKR065C	YKL063C	P35725	167 aa		6.09	□□□□□ -1.43
PAM17	YKR065C	MRPL3	P36516	390 aa		6.09	□□□□□ -1.43
PAM17	YKR065C	ECM14	P38836	430 aa		6.09	□□□□□ -1.43
PAM17	YKR065C	XPT1	P47165	209 aa		6.09	□□□□□ -1.43
PAM17	YKR065C	YNL234W	P53857	426 aa		6.09	□□□□□ -1.43
PAM17	YKR065C	GAT3	Q07928	141 aa		6.09	□□□□□ -1.43
PAM17	YKR065C	YLR031W	Q07978	186 aa		6.09	□□□□□ -1.43
PAM17	YKR065C	EAF3	Q12432	401 aa		6.09	□□□□□ -1.43
PAM17	YKR065C	HUT1	Q12520	339 aa		6.09	□□□□□ -1.43
PAM17	YKR065C	ACH1	P32316	526 aa		6.08	□□□□□ -1.44
PAM17	YKR065C	MIA40	P36046	403 aa		6.08	□□□□□ -1.44
PAM17	YKR065C	PRM5	P40476	318 aa		6.08	□□□□□ -1.44
PAM17	YKR065C	YIL060W	P40519	144 aa		6.08	□□□□□ -1.44
PAM17	YKR065C	CAT5	P41735	233 aa		6.08	□□□□□ -1.44
PAM17	YKR065C	GEP7	P53171	287 aa		6.08	□□□□□ -1.44
PAM17	YKR065C	RTT103	Q05543	409 aa		6.08	□□□□□ -1.44
PAM17	YKR065C	PHO92	Q06390	306 aa		6.08	□□□□□ -1.44
PAM17	YKR065C	YOR385W	Q08909	290 aa		6.08	□□□□□ -1.44
PAM17	YKR065C	ATG40	Q99325	256 aa		6.08	□□□□□ -1.44
PAM17	YKR065C	VMA8	P32610	256 aa	Known RBP	6.07	□□□□□ -1.44
PAM17	YKR065C	LAG1	P38703	411 aa		6.07	□□□□□ -1.44
PAM17	YKR065C	GAT2	P40209	560 aa		6.07	□□□□□ -1.44
PAM17	YKR065C	RSM27	P53305	110 aa		6.07	□□□□□ -1.44
PAM17	YKR065C	SMM1	P53720	384 aa	Known RBP	6.07	□□□□□ -1.44
PAM17	YKR065C	ALG9	P53868	555 aa	Known RBP	6.07	□□□□□ -1.44
PAM17	YKR065C	SPS2	P08459	502 aa		6.06	□□□□□ -1.44
PAM17	YKR065C	RPL3	P14126	387 aa	Known RBP	6.06	□□□□□ -1.44
PAM17	YKR065C	FUS3	P16892	353 aa	Known RBP	6.06	□□□□□ -1.44
PAM17	YKR065C	CPR4	P25334	318 aa		6.06	□□□□□ -1.44
PAM17	YKR065C	YCL042W	P25572	119 aa		6.06	□□□□□ -1.44
PAM17	YKR065C	IMP1	P28627	190 aa		6.06	□□□□□ -1.44
PAM17	YKR065C	ERG3	P32353	365 aa		6.06	□□□□□ -1.44
PAM17	YKR065C	VAM7	P32912	316 aa		6.06	□□□□□ -1.44
PAM17	YKR065C	MRPL27	P36526	146 aa	Predicted RBP	6.06	□□□□□ -1.44
PAM17	YKR065C	NTC20	P38302	140 aa	Predicted RBP	6.06	□□□□□ -1.44
PAM17	YKR065C	YBR242W	P38331	238 aa		6.06	□□□□□ -1.44
PAM17	YKR065C	YHR122W	P38829	231 aa		6.06	□□□□□ -1.44
PAM17	YKR065C	RMD6	P39975	231 aa		6.06	□□□□□ -1.44
PAM17	YKR065C	ATG27	P46989	271 aa		6.06	□□□□□ -1.44
PAM17	YKR065C	GWT1	P47026	490 aa		6.06	□□□□□ -1.44
PAM17	YKR065C	YGR042W	P53227	271 aa		6.06	□□□□□ -1.44
PAM17	YKR065C	FMP48	P53233	369 aa		6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms