RNA–Protein interactions for RNA: YKR029C

SET3, Transcript of Defining member of the SET3 histone deacetylase complex, yeast

Gene SET3, Length 2,256 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SET3	YKR029C	HMLALPHA1	P0CY07	175 aa		0.81	□□□□□ -2.28
SET3	YKR029C	NHP6B	P11633	99 aa	Known RBP	0.81	□□□□□ -2.28
SET3	YKR029C	YCR102C	P25608	368 aa		0.81	□□□□□ -2.28
SET3	YKR029C	EHD3	P28817	500 aa		0.81	□□□□□ -2.28
SET3	YKR029C	VMA6	P32366	345 aa	Known RBP	0.81	□□□□□ -2.28
SET3	YKR029C	SCM4	P32564	187 aa		0.81	□□□□□ -2.28
SET3	YKR029C	YHR125W	P38831	101 aa		0.81	□□□□□ -2.28
SET3	YKR029C	RTR1	P40084	226 aa	Predicted RBP	0.81	□□□□□ -2.28
SET3	YKR029C	GCN20	P43535	752 aa	Known RBP	0.81	□□□□□ -2.28
SET3	YKR029C	RPC17	P47076	161 aa		0.81	□□□□□ -2.28
SET3	YKR029C	MCM22	P47167	239 aa		0.81	□□□□□ -2.28
SET3	YKR029C	YGL034C	P53186	121 aa		0.81	□□□□□ -2.28
SET3	YKR029C	GTR2	P53290	341 aa		0.81	□□□□□ -2.28
SET3	YKR029C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.81	□□□□□ -2.28	not detected
SET3	YKR029C	YNL046W	P53956	172 aa		0.81	□□□□□ -2.28
SET3	YKR029C	YMD8	Q03697	442 aa		0.81	□□□□□ -2.28
SET3	YKR029C	YPR172W	Q06608	200 aa		0.81	□□□□□ -2.28
SET3	YKR029C	YOR283W	Q12040	230 aa	Known RBP	0.81	□□□□□ -2.28
SET3	YKR029C	LSO2	Q3E772	92 aa	Known RBP	0.81	□□□□□ -2.28
SET3	YKR029C	RPL9A	P05738	191 aa	Known RBP	0.81	□□□□□ -2.28
SET3	YKR029C	SNF6	P18888	332 aa		0.81	□□□□□ -2.28
SET3	YKR029C	RPO26	P20435	155 aa		0.81	□□□□□ -2.28
SET3	YKR029C	SCO1	P23833	295 aa		0.81	□□□□□ -2.28
SET3	YKR029C	CDC10	P25342	322 aa	Known RBP	0.81	□□□□□ -2.28
SET3	YKR029C	VMA11	P32842	164 aa		0.81	□□□□□ -2.28
SET3	YKR029C	RIB1	P38066	345 aa		0.81	□□□□□ -2.28
SET3	YKR029C	MED6	P38782	295 aa		0.81	□□□□□ -2.28
SET3	YKR029C	OTU1	P43558	301 aa		0.81	□□□□□ -2.28
SET3	YKR029C	MNN5	P46982	586 aa		0.81	□□□□□ -2.28
SET3	YKR029C	SNX4	P47057	423 aa		0.81	□□□□□ -2.28
SET3	YKR029C	MIC26	P50087	233 aa		0.81	□□□□□ -2.28
SET3	YKR029C	RPL9B	P51401	191 aa	Known RBP	0.81	□□□□□ -2.28
SET3	YKR029C	YGL159W	P53110	370 aa		0.81	□□□□□ -2.28
SET3	YKR029C	COS6	P53344	381 aa		0.81	□□□□□ -2.28
SET3	YKR029C	FYV6	P53913	173 aa		0.81	□□□□□ -2.28
SET3	YKR029C	ABF2	Q02486	183 aa		0.81	□□□□□ -2.28
SET3	YKR029C	HEM25	Q07534	307 aa		0.81	□□□□□ -2.28
SET3	YKR029C	EMC6	Q12431	108 aa		0.81	□□□□□ -2.28
SET3	YKR029C	THP2	O13539	261 aa	Known RBP	0.8	□□□□□ -2.28
SET3	YKR029C	Q0255	P03881	472 aa		0.8	□□□□□ -2.28
SET3	YKR029C	SPT3	P06844	337 aa		0.8	□□□□□ -2.28
SET3	YKR029C	DSF1	P0CX08	502 aa		0.8	□□□□□ -2.28
SET3	YKR029C	YNR073C	P0CX09	502 aa		0.8	□□□□□ -2.28
SET3	YKR029C	SNA3	P14359	133 aa		0.8	□□□□□ -2.28
SET3	YKR029C	ERD2	P18414	219 aa		0.8	□□□□□ -2.28
SET3	YKR029C	RPS5	P26783	225 aa	Known RBP	0.8	□□□□□ -2.28
SET3	YKR029C	NTG1	P31378	399 aa		0.8	□□□□□ -2.28
SET3	YKR029C	MSA2	P36157	363 aa		0.8	□□□□□ -2.28
SET3	YKR029C	RSM25	P40496	264 aa		0.8	□□□□□ -2.28
SET3	YKR029C	CAT5	P41735	233 aa		0.8	□□□□□ -2.28
SET3	YKR029C	YRB1	P41920	201 aa	Known RBP	0.8	□□□□□ -2.28
SET3	YKR029C	YJR056C	P47115	236 aa		0.8	□□□□□ -2.28
SET3	YKR029C	RSM10	Q03201	203 aa		0.8	□□□□□ -2.28
SET3	YKR029C	YML096W	Q04489	525 aa		0.8	□□□□□ -2.28
SET3	YKR029C	YLR030W	Q07967	263 aa		0.8	□□□□□ -2.28
SET3	YKR029C	VPS68	Q12016	184 aa		0.8	□□□□□ -2.28
SET3	YKR029C	YDR524C-B	Q3E6R4	66 aa		0.8	□□□□□ -2.28
SET3	YKR029C	NCB2	Q92317	146 aa		0.8	□□□□□ -2.28
SET3	YKR029C	LYS2	P07702	1392 aa		0.8	□□□□□ -2.28
SET3	YKR029C	FKS1	P38631	1876 aa	Known RBP	0.8	□□□□□ -2.28
SET3	YKR029C	RPL28	P02406	149 aa	Known RBP	0.8	□□□□□ -2.28
SET3	YKR029C	RHO1	P06780	209 aa	Known RBP	0.8	□□□□□ -2.28
SET3	YKR029C	YBR121C-A	P0C5L4	52 aa		0.8	□□□□□ -2.28
SET3	YKR029C	FCY2	P17064	533 aa		0.8	□□□□□ -2.28
SET3	YKR029C	COQ1	P18900	473 aa		0.8	□□□□□ -2.28
SET3	YKR029C	YMR31	P19955	123 aa		0.8	□□□□□ -2.28
SET3	YKR029C	YPT52	P36018	234 aa	Known RBP	0.8	□□□□□ -2.28
SET3	YKR029C	MIC12	P38341	106 aa		0.8	□□□□□ -2.28
SET3	YKR029C	YJR146W	P47174	117 aa		0.8	□□□□□ -2.28
SET3	YKR029C	TRM9	P49957	279 aa		0.8	□□□□□ -2.28
SET3	YKR029C	IGO1	P53897	168 aa		0.8	□□□□□ -2.28
SET3	YKR029C	CWC21	Q03375	135 aa	Known RBP	0.8	□□□□□ -2.28
SET3	YKR029C	RNH1	Q04740	348 aa		0.8	□□□□□ -2.28
SET3	YKR029C	CDC123	Q05791	360 aa		0.8	□□□□□ -2.28
SET3	YKR029C	DCR2	Q05924	578 aa		0.8	□□□□□ -2.28
SET3	YKR029C	ATG39	Q06159	398 aa		0.8	□□□□□ -2.28
SET3	YKR029C	AKR2	Q12013	749 aa		0.8	□□□□□ -2.28
SET3	YKR029C	SEY1	Q99287	776 aa		0.8	□□□□□ -2.28
SET3	YKR029C	PRP8	P33334	2413 aa	Known RBP	0.8	□□□□□ -2.28
SET3	YKR029C	YHR032W-A	P0C5N6	59 aa		0.79	□□□□□ -2.28
SET3	YKR029C	URA6	P15700	204 aa		0.79	□□□□□ -2.28
SET3	YKR029C	STE18	P18852	110 aa		0.79	□□□□□ -2.28
SET3	YKR029C	PBN1	P25580	416 aa		0.79	□□□□□ -2.28
SET3	YKR029C	YBR063C	P38083	404 aa		0.79	□□□□□ -2.28
SET3	YKR029C	RPF1	P38805	295 aa	Known RBP	0.79	□□□□□ -2.28
SET3	YKR029C	YIL001W	P40560	513 aa		0.79	□□□□□ -2.28
SET3	YKR029C	PGA2	P53903	129 aa		0.79	□□□□□ -2.28
SET3	YKR029C	CGI121	Q03705	181 aa	Known RBP	0.79	□□□□□ -2.28
SET3	YKR029C	BNA7	Q04066	261 aa		0.79	□□□□□ -2.28
SET3	YKR029C	TPO4	Q12256	659 aa		0.79	□□□□□ -2.28
SET3	YKR029C	DCN1	Q12395	269 aa		0.79	□□□□□ -2.28
SET3	YKR029C	GSC2	P40989	1895 aa		0.79	□□□□□ -2.28
SET3	YKR029C	MSW1	P04803	379 aa		0.78	□□□□□ -2.28
SET3	YKR029C	NTF2	P33331	125 aa	Known RBP	0.78	□□□□□ -2.28
SET3	YKR029C	YOR062C	P36025	268 aa		0.78	□□□□□ -2.28
SET3	YKR029C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.78	□□□□□ -2.28	not detected
SET3	YKR029C	MSS2	P40990	351 aa		0.78	□□□□□ -2.28
SET3	YKR029C	YJR149W	P47177	404 aa		0.78	□□□□□ -2.28
SET3	YKR029C	NUP57	P48837	541 aa		0.78	□□□□□ -2.28
SET3	YKR029C	BRR6	P53062	197 aa		0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms