RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W MRPL49P40858 161 aaPredicted RBP3.49□□□□□ -1.85
SPC42YKL042W SNX4P47057 423 aa3.49□□□□□ -1.85
SPC42YKL042W RPL9BP51401 191 aaKnown RBP3.49□□□□□ -1.85
SPC42YKL042W APJ1P53940 528 aa3.49□□□□□ -1.85
SPC42YKL042W SUE1Q06524 206 aa3.49□□□□□ -1.85
SPC42YKL042W GRX2P17695 143 aaKnown RBP3.48□□□□□ -1.85
SPC42YKL042W ATP7P30902 174 aa3.48□□□□□ -1.85
SPC42YKL042W SLM2P53955 656 aa3.48□□□□□ -1.85
SPC42YKL042W MIX17Q03667 156 aa3.48□□□□□ -1.85
SPC42YKL042W FKS1P38631 1876 aaKnown RBP3.47□□□□□ -1.85
SPC42YKL042W CDC8P00572 216 aa3.47□□□□□ -1.85
SPC42YKL042W AST2P39945 430 aaKnown RBP3.47□□□□□ -1.85
SPC42YKL042W AIM25P47140 327 aa3.47□□□□□ -1.85
SPC42YKL042W YGR050CP53231 118 aa3.47□□□□□ -1.85
SPC42YKL042W PSF1Q12488 208 aa3.47□□□□□ -1.85
SPC42YKL042W MHT1Q12525 324 aa3.47□□□□□ -1.85
SPC42YKL042W MSW1P04803 379 aa3.46□□□□□ -1.86
SPC42YKL042W SCO1P23833 295 aa3.46□□□□□ -1.86
SPC42YKL042W SKG1P36169 355 aa3.46□□□□□ -1.86
SPC42YKL042W YOL160WQ08321 113 aa3.46□□□□□ -1.86
SPC42YKL042W YNG1Q08465 219 aa3.46□□□□□ -1.86
SPC42YKL042W VPS68Q12016 184 aa3.46□□□□□ -1.86
SPC42YKL042W REP2P03872 296 aa3.45□□□□□ -1.86
SPC42YKL042W PUT1P09368 476 aa3.45□□□□□ -1.86
SPC42YKL042W YLR156WP0CE96 114 aa3.45□□□□□ -1.86
SPC42YKL042W YLR159WP0CE97 114 aa3.45□□□□□ -1.86
SPC42YKL042W YLR161WP0CE98 114 aa3.45□□□□□ -1.86
SPC42YKL042W MAG1P22134 296 aaKnown RBP3.45□□□□□ -1.86
SPC42YKL042W CLB6P32943 380 aa3.45□□□□□ -1.86
SPC42YKL042W MED6P38782 295 aa3.45□□□□□ -1.86
SPC42YKL042W MNN5P46982 586 aa3.45□□□□□ -1.86
SPC42YKL042W TRM12Q04235 462 aa3.45□□□□□ -1.86
SPC42YKL042W YPL162CQ12042 273 aa3.45□□□□□ -1.86
SPC42YKL042W SEC72P39742 193 aaKnown RBP3.44□□□□□ -1.86
SPC42YKL042W HMF1P40037 129 aaKnown RBP3.44□□□□□ -1.86
SPC42YKL042W COS6P53344 381 aa3.44□□□□□ -1.86
SPC42YKL042W COG5P53951 403 aa3.44□□□□□ -1.86
SPC42YKL042W DIA1P54005 336 aa3.44□□□□□ -1.86
SPC42YKL042W MRS1P07266 363 aa3.43□□□□□ -1.86
SPC42YKL042W KSS1P14681 368 aa3.43□□□□□ -1.86
SPC42YKL042W UTR5P32630 166 aa3.43□□□□□ -1.86
SPC42YKL042W CAF4P36130 643 aa3.43□□□□□ -1.86
SPC42YKL042W UTP30P36144 274 aaKnown RBP3.43□□□□□ -1.86
SPC42YKL042W ARR2Q06597 130 aa3.43□□□□□ -1.86
SPC42YKL042W USB1Q12208 290 aaKnown RBP3.43□□□□□ -1.86
SPC42YKL042W SEC17P32602 292 aa3.42□□□□□ -1.86
SPC42YKL042W EGD2P38879 174 aaKnown RBP3.42□□□□□ -1.86
SPC42YKL042W GGA1Q06336 557 aa3.42□□□□□ -1.86
SPC42YKL042W IKI3Q06706 1349 aaKnown RBP3.42□□□□□ -1.86
SPC42YKL042W YER034WP40022 185 aaKnown RBP3.41□□□□□ -1.86
SPC42YKL042W RTC4P53850 401 aa3.41□□□□□ -1.86
SPC42YKL042W PRM15Q03262 622 aa3.41□□□□□ -1.86
SPC42YKL042W MCP1Q12106 302 aa3.41□□□□□ -1.86
SPC42YKL042W YFR032C-BQ8TGU2 87 aa3.41□□□□□ -1.86
SPC42YKL042W IGO2Q9P305 131 aa3.41□□□□□ -1.86
SPC42YKL042W SIR2P06700 562 aa3.4□□□□□ -1.87
SPC42YKL042W SHG1P38337 142 aa3.4□□□□□ -1.87
SPC42YKL042W AIF1P52923 378 aa3.4□□□□□ -1.87
SPC42YKL042W NEJ1Q06148 342 aa3.4□□□□□ -1.87
SPC42YKL042W NOC4Q06512 552 aaPredicted RBP3.4□□□□□ -1.87
SPC42YKL042W YET3Q07451 203 aa3.4□□□□□ -1.87
SPC42YKL042W ATO3Q12359 275 aa3.4□□□□□ -1.87
SPC42YKL042W BET1P22804 142 aa3.39□□□□□ -1.87
SPC42YKL042W PRM10P42946 383 aa3.39□□□□□ -1.87
SPC42YKL042W SWP1Q02795 286 aa3.39□□□□□ -1.87
SPC42YKL042W YDR249CQ03787 373 aa3.39□□□□□ -1.87
SPC42YKL042W GRE1Q08969 168 aa3.39□□□□□ -1.87
SPC42YKL042W EMC6Q12431 108 aa3.39□□□□□ -1.87
SPC42YKL042W URA5P13298 226 aaKnown RBP3.38□□□□□ -1.87
SPC42YKL042W YHR180WP38868 163 aa3.38□□□□□ -1.87
SPC42YKL042W PDS1P40316 373 aaPredicted RBP3.38□□□□□ -1.87
SPC42YKL042W YGR219WP53307 113 aa3.38□□□□□ -1.87
SPC42YKL042W SPG3Q04398 127 aaPredicted RBP3.38□□□□□ -1.87
SPC42YKL042W TSC3Q3E790 80 aa3.38□□□□□ -1.87
SPC42YKL042W SNF6P18888 332 aa3.37□□□□□ -1.87
SPC42YKL042W MDH3P32419 343 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
SPC42YKL042W YOR062CP36025 268 aa3.37□□□□□ -1.87
SPC42YKL042W ERG10P41338 398 aaKnown RBP3.37□□□□□ -1.87
SPC42YKL042W CIS3P47001 227 aa3.37□□□□□ -1.87
SPC42YKL042W YNL184CP53876 108 aa3.37□□□□□ -1.87
SPC42YKL042W ARO80Q04052 950 aa3.37□□□□□ -1.87
SPC42YKL042W YIL177CP40434 1758 aa3.36□□□□□ -1.87
SPC42YKL042W YJL225CP40889 1758 aa3.36□□□□□ -1.87
SPC42YKL042W RPB3P16370 318 aaKnown RBP3.36□□□□□ -1.87
SPC42YKL042W MRPS28P21771 286 aa3.36□□□□□ -1.87
SPC42YKL042W TAH1P25638 111 aaPredicted RBP3.36□□□□□ -1.87
SPC42YKL042W GLE2P40066 365 aa3.36□□□□□ -1.87
SPC42YKL042W PGD1P40356 397 aa3.36□□□□□ -1.87
SPC42YKL042W POG1P40473 351 aa3.36□□□□□ -1.87
SPC42YKL042W NRK1P53915 240 aa3.36□□□□□ -1.87
SPC42YKL042W SNO1Q03144 224 aa3.36□□□□□ -1.87
SPC42YKL042W YLR036CQ07986 203 aa3.36□□□□□ -1.87
SPC42YKL042W YOL024WQ08172 172 aa3.36□□□□□ -1.87
SPC42YKL042W TIM9O74700 87 aa3.35□□□□□ -1.87
SPC42YKL042W FBA1P14540 359 aaKnown RBP3.35□□□□□ -1.87
SPC42YKL042W MEI4P29467 408 aa3.35□□□□□ -1.87
SPC42YKL042W MRPL17P36528 281 aa3.35□□□□□ -1.87
SPC42YKL042W FUS2Q05670 677 aa3.35□□□□□ -1.87
SPC42YKL042W GRX8Q05926 109 aa3.35□□□□□ -1.87
SPC42YKL042W MBF1O14467 151 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms