RNA–Protein interactions for RNA: YHR165C

PRP8, Transcript of Component of U4/U6-U5 snRNP complex, yeastyeast

Gene PRP8, Length 7,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP8YHR165C ULI1P43604 169 aa2.5□□□□□ -2.01
PRP8YHR165C LST7P53237 242 aa2.5□□□□□ -2.01
PRP8YHR165C SMX3P54999 86 aaPredicted RBP2.5□□□□□ -2.01
PRP8YHR165C YMR099CQ03161 297 aaKnown RBP2.5□□□□□ -2.01
PRP8YHR165C SMP3Q04174 516 aa2.5□□□□□ -2.01
PRP8YHR165C TRX1P22217 103 aaKnown RBP2.5□□□□□ -2.01
PRP8YHR165C HRB1P38922 454 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
PRP8YHR165C BMT5P40493 336 aa2.5□□□□□ -2.01
PRP8YHR165C YIR035CP40579 254 aa2.5□□□□□ -2.01
PRP8YHR165C GPI2P46961 280 aa2.5□□□□□ -2.01
PRP8YHR165C TAX4P47030 604 aa2.5□□□□□ -2.01
PRP8YHR165C STP1Q00947 519 aa2.5□□□□□ -2.01
PRP8YHR165C ISA1Q07821 250 aaPredicted RBP2.5□□□□□ -2.01
PRP8YHR165C PRM3Q08931 133 aa2.5□□□□□ -2.01
PRP8YHR165C TPK3P05986 398 aa2.5□□□□□ -2.01
PRP8YHR165C UBI4P0CG63 381 aaKnown RBP2.5□□□□□ -2.01
PRP8YHR165C SNF4P12904 322 aa2.5□□□□□ -2.01
PRP8YHR165C BET1P22804 142 aa2.5□□□□□ -2.01
PRP8YHR165C GBP2P25555 427 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
PRP8YHR165C TRS65P32893 560 aa2.5□□□□□ -2.01
PRP8YHR165C SHE1P38200 338 aa2.5□□□□□ -2.01
PRP8YHR165C TCM62P38228 572 aaKnown RBP2.5□□□□□ -2.01
PRP8YHR165C ECM34P38728 170 aa2.5□□□□□ -2.01
PRP8YHR165C YFL015CP43578 164 aa2.5□□□□□ -2.01
PRP8YHR165C FMP48P53233 369 aa2.5□□□□□ -2.01
PRP8YHR165C SPG4Q04438 115 aa2.5□□□□□ -2.01
PRP8YHR165C EMP70P32802 667 aa2.5□□□□□ -2.01
PRP8YHR165C PRS3P38689 320 aaKnown RBP2.5□□□□□ -2.01
PRP8YHR165C YHL042WP38729 150 aa2.5□□□□□ -2.01
PRP8YHR165C YPL068CQ02749 293 aa2.5□□□□□ -2.01
PRP8YHR165C VPS71Q03433 280 aa2.5□□□□□ -2.01
PRP8YHR165C TY1A-DR2Q03964 440 aaKnown RBP2.5□□□□□ -2.01
PRP8YHR165C SUE1Q06524 206 aa2.5□□□□□ -2.01
PRP8YHR165C VPS63O13549 108 aa2.5□□□□□ -2.01
PRP8YHR165C GCY1P14065 312 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
PRP8YHR165C HSP12P22943 109 aaKnown RBP2.5□□□□□ -2.01
PRP8YHR165C BUB2P26448 306 aaPredicted RBP2.5□□□□□ -2.01
PRP8YHR165C OCH1P31755 480 aa2.5□□□□□ -2.01
PRP8YHR165C RPD3P32561 433 aa2.5□□□□□ -2.01
PRP8YHR165C DSS4P32601 143 aa2.5□□□□□ -2.01
PRP8YHR165C UTR2P32623 467 aa2.5□□□□□ -2.01
PRP8YHR165C UGA4P32837 571 aa2.5□□□□□ -2.01
PRP8YHR165C ASK1P35734 292 aa2.5□□□□□ -2.01
PRP8YHR165C SOL2P37262 315 aa2.5□□□□□ -2.01
PRP8YHR165C DAN1P47178 298 aa2.5□□□□□ -2.01
PRP8YHR165C COS12P53053 380 aa2.5□□□□□ -2.01
PRP8YHR165C YGR168CP53293 376 aa2.5□□□□□ -2.01
PRP8YHR165C YHM2Q04013 314 aa2.5□□□□□ -2.01
PRP8YHR165C MCK1P21965 375 aaKnown RBP2.5□□□□□ -2.01
PRP8YHR165C BEM1P29366 551 aa2.5□□□□□ -2.01
PRP8YHR165C YBR144CP34215 104 aa2.5□□□□□ -2.01
PRP8YHR165C CBT1P36038 271 aaPredicted RBP2.5□□□□□ -2.01
PRP8YHR165C AVT5P38176 459 aa2.5□□□□□ -2.01
PRP8YHR165C SNU13P39990 126 aaKnown RBP2.5□□□□□ -2.01
PRP8YHR165C YCH1P42937 148 aa2.5□□□□□ -2.01
PRP8YHR165C NUP100Q02629 959 aa2.5□□□□□ -2.01
PRP8YHR165C MMT2Q08970 484 aa2.5□□□□□ -2.01
PRP8YHR165C RPL11AP0C0W9 174 aaKnown RBP2.49□□□□□ -2.01
PRP8YHR165C NHP6AP11632 93 aaKnown RBP2.49□□□□□ -2.01
PRP8YHR165C RPB10P22139 70 aa2.49□□□□□ -2.01
PRP8YHR165C SOF1P33750 489 aaKnown RBP2.49□□□□□ -2.01
PRP8YHR165C YKL162CP36052 402 aa2.49□□□□□ -2.01
PRP8YHR165C LCB2P40970 561 aa2.49□□□□□ -2.01
PRP8YHR165C AIM25P47140 327 aa2.49□□□□□ -2.01
PRP8YHR165C YJR111CP47148 283 aaKnown RBP2.49□□□□□ -2.01
PRP8YHR165C MTQ1P53944 314 aa2.49□□□□□ -2.01
PRP8YHR165C DPP1Q05521 289 aa2.49□□□□□ -2.01
PRP8YHR165C GRX8Q05926 109 aa2.49□□□□□ -2.01
PRP8YHR165C RPL11BQ3E757 174 aaPredicted RBP2.49□□□□□ -2.01
PRP8YHR165C RPS21AP0C0V8 87 aaKnown RBP2.49□□□□□ -2.01
PRP8YHR165C RPL31AP0C2H8 113 aaKnown RBP2.49□□□□□ -2.01
PRP8YHR165C SPO12P17123 173 aa2.49□□□□□ -2.01
PRP8YHR165C UBS1P38290 277 aa2.49□□□□□ -2.01
PRP8YHR165C MET30P39014 640 aa2.49□□□□□ -2.01
PRP8YHR165C YJR120WP47157 116 aa2.49□□□□□ -2.01
PRP8YHR165C SDT1P53078 280 aa2.49□□□□□ -2.01
PRP8YHR165C YGR012WP53206 393 aa2.49□□□□□ -2.01
PRP8YHR165C YPL062WQ02781 134 aa2.49□□□□□ -2.01
PRP8YHR165C ECM7Q06200 448 aa2.49□□□□□ -2.01
PRP8YHR165C MRL1Q06815 381 aa2.49□□□□□ -2.01
PRP8YHR165C ALG6Q12001 544 aaKnown RBP2.49□□□□□ -2.01
PRP8YHR165C RAD10P06838 210 aa2.49□□□□□ -2.01
PRP8YHR165C RPB8P20436 146 aa2.49□□□□□ -2.01
PRP8YHR165C CHS7P38843 316 aa2.49□□□□□ -2.01
PRP8YHR165C RPL13BP40212 199 aaKnown RBP2.49□□□□□ -2.01
PRP8YHR165C CTK1Q03957 528 aaKnown RBP2.49□□□□□ -2.01
PRP8YHR165C YLR030WQ07967 263 aa2.49□□□□□ -2.01
PRP8YHR165C YPL245WQ12179 454 aaKnown RBP2.49□□□□□ -2.01
PRP8YHR165C EMC6Q12431 108 aa2.49□□□□□ -2.01
PRP8YHR165C GAL10P04397 699 aa2.49□□□□□ -2.01
PRP8YHR165C RPS25BP0C0T4 108 aaKnown RBP2.49□□□□□ -2.01
PRP8YHR165C RPS4AP0CX35 261 aaKnown RBP2.49□□□□□ -2.01
PRP8YHR165C RPS4BP0CX36 261 aaKnown RBP2.49□□□□□ -2.01
PRP8YHR165C AUR1P36107 401 aaPredicted RBP2.49□□□□□ -2.01
PRP8YHR165C PCL5P38794 229 aa2.49□□□□□ -2.01
PRP8YHR165C YJL171CP46992 396 aa2.49□□□□□ -2.01
PRP8YHR165C TOS2P50078 622 aa2.49□□□□□ -2.01
PRP8YHR165C MIM1Q08176 113 aa2.49□□□□□ -2.01
PRP8YHR165C YOR186WQ08560 144 aa2.49□□□□□ -2.01
PRP8YHR165C IZH2Q12442 317 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 1224.5 ms