RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C CSM4Q08955 156 aa5.06□□□□□ -1.6
SFB3YHR098C YCT1Q12235 531 aa5.06□□□□□ -1.6
SFB3YHR098C CHO1P08456 276 aa5.05□□□□□ -1.6
SFB3YHR098C DPM1P14020 267 aaKnown RBP5.05□□□□□ -1.6
SFB3YHR098C NOP1P15646 327 aaKnown RBP5.05□□□□□ -1.6
SFB3YHR098C RNQ1P25367 405 aa5.05□□□□□ -1.6
SFB3YHR098C SDS24P38314 527 aa5.05□□□□□ -1.6
SFB3YHR098C SMB1P40018 196 aaKnown RBP5.05□□□□□ -1.6
SFB3YHR098C YNL195CP40168 261 aa5.05□□□□□ -1.6
SFB3YHR098C MIC26P50087 233 aa5.05□□□□□ -1.6
SFB3YHR098C CTF19Q02732 369 aa5.05□□□□□ -1.6
SFB3YHR098C PAU23Q07987 124 aa5.05□□□□□ -1.6
SFB3YHR098C PAU17Q12370 124 aa5.05□□□□□ -1.6
SFB3YHR098C SLO1Q3E784 85 aa5.05□□□□□ -1.6
SFB3YHR098C Q0144Q9ZZW2 109 aa5.05□□□□□ -1.6
SFB3YHR098C MSW1P04803 379 aa5.05□□□□□ -1.6
SFB3YHR098C RPP2AP05319 106 aaKnown RBP5.05□□□□□ -1.6
SFB3YHR098C RPS9BP05755 195 aaKnown RBP5.05□□□□□ -1.6
SFB3YHR098C RPF1P38805 295 aaKnown RBP5.05□□□□□ -1.6
SFB3YHR098C GPI14P47088 403 aaKnown RBP5.05□□□□□ -1.6
SFB3YHR098C THG1P53215 237 aaKnown RBP5.05□□□□□ -1.6
SFB3YHR098C TNA1P53322 534 aa5.05□□□□□ -1.6
SFB3YHR098C YNL134CP53912 376 aaKnown RBP5.05□□□□□ -1.6
SFB3YHR098C SMX3P54999 86 aaPredicted RBP5.05□□□□□ -1.6
SFB3YHR098C PIR3Q03180 325 aa5.05□□□□□ -1.6
SFB3YHR098C YDR444WQ04093 687 aa5.05□□□□□ -1.6
SFB3YHR098C CPR2P23285 205 aa5.04□□□□□ -1.6
SFB3YHR098C IMG2P25642 146 aaPredicted RBP5.04□□□□□ -1.6
SFB3YHR098C TRR1P29509 319 aaKnown RBP5.04□□□□□ -1.6
SFB3YHR098C MTM1P53320 366 aa5.04□□□□□ -1.6
SFB3YHR098C FSH2Q05015 223 aa5.04□□□□□ -1.6
SFB3YHR098C YLR030WQ07967 263 aa5.04□□□□□ -1.6
SFB3YHR098C YDL177CQ12257 170 aa5.04□□□□□ -1.6
SFB3YHR098C POR1P04840 283 aaKnown RBP5.04□□□□□ -1.6
SFB3YHR098C CBS1P14066 229 aa5.04□□□□□ -1.6
SFB3YHR098C ARO2P28777 376 aaKnown RBP5.04□□□□□ -1.6
SFB3YHR098C PEX7P39108 375 aa5.04□□□□□ -1.6
SFB3YHR098C YEA4P40004 342 aa5.04□□□□□ -1.6
SFB3YHR098C YGL204CP53089 101 aa5.04□□□□□ -1.6
SFB3YHR098C YML018CQ03730 393 aa5.04□□□□□ -1.6
SFB3YHR098C ORT1Q12375 292 aa5.04□□□□□ -1.6
SFB3YHR098C MES1P00958 751 aaKnown RBP5.04□□□□□ -1.6
SFB3YHR098C NHP6AP11632 93 aaKnown RBP5.04□□□□□ -1.6
SFB3YHR098C DSS4P32601 143 aa5.04□□□□□ -1.6
SFB3YHR098C AME1P38313 324 aa5.04□□□□□ -1.6
SFB3YHR098C SLM6P38343 150 aa5.04□□□□□ -1.6
SFB3YHR098C RIB4P50861 169 aaPredicted RBP5.04□□□□□ -1.6
SFB3YHR098C YIP4P53093 235 aa5.04□□□□□ -1.6
SFB3YHR098C CAB5Q03941 241 aa5.04□□□□□ -1.6
SFB3YHR098C YML096WQ04489 525 aa5.04□□□□□ -1.6
SFB3YHR098C YPR147CQ06522 304 aaKnown RBP5.04□□□□□ -1.6
SFB3YHR098C RPB5P20434 215 aa5.03□□□□□ -1.6
SFB3YHR098C GEX1P25596 615 aa5.03□□□□□ -1.6
SFB3YHR098C LSM2P38203 95 aaKnown RBP5.03□□□□□ -1.6
SFB3YHR098C ECM34P38728 170 aa5.03□□□□□ -1.6
SFB3YHR098C SFH5P47008 294 aa5.03□□□□□ -1.6
SFB3YHR098C BXI1P48558 297 aa5.03□□□□□ -1.6
SFB3YHR098C YGR126WP53274 230 aa5.03□□□□□ -1.6
SFB3YHR098C ALG9P53868 555 aaKnown RBP5.03□□□□□ -1.6
SFB3YHR098C YDL157CQ12082 118 aa5.03□□□□□ -1.6
SFB3YHR098C TPT1Q12272 230 aaKnown RBP5.03□□□□□ -1.6
SFB3YHR098C PCL5P38794 229 aa5.03□□□□□ -1.6
SFB3YHR098C BUD8P41698 603 aa5.03□□□□□ -1.6
SFB3YHR098C EMC4P53073 190 aa5.03□□□□□ -1.6
SFB3YHR098C DIA1P54005 336 aa5.03□□□□□ -1.6
SFB3YHR098C YDR248CQ03786 193 aa5.03□□□□□ -1.6
SFB3YHR098C ADH6Q04894 360 aaKnown RBP5.03□□□□□ -1.6
SFB3YHR098C WSC3Q12215 556 aa5.03□□□□□ -1.6
SFB3YHR098C COX17Q12287 69 aa5.03□□□□□ -1.6
SFB3YHR098C MGM101P32787 269 aaKnown RBP5.02□□□□□ -1.61
SFB3YHR098C ATF1P40353 525 aa5.02□□□□□ -1.61
SFB3YHR098C CDH1P53197 566 aa5.02□□□□□ -1.61
SFB3YHR098C HHT1P61830 136 aa5.02□□□□□ -1.61
SFB3YHR098C TMN2Q04562 672 aa5.02□□□□□ -1.61
SFB3YHR098C RTN1Q04947 295 aaKnown RBP5.02□□□□□ -1.61
SFB3YHR098C HRI1Q05905 244 aaKnown RBP5.02□□□□□ -1.61
SFB3YHR098C TGS1Q12052 315 aa5.02□□□□□ -1.61
SFB3YHR098C SWT1Q12104 458 aa5.02□□□□□ -1.61
SFB3YHR098C CPA1P07258 411 aaKnown RBP5.02□□□□□ -1.61
SFB3YHR098C ERG8P24521 451 aa5.02□□□□□ -1.61
SFB3YHR098C AFG1P32317 509 aa5.02□□□□□ -1.61
SFB3YHR098C HMX1P32339 317 aa5.02□□□□□ -1.61
SFB3YHR098C YPT53P36019 220 aa5.02□□□□□ -1.61
SFB3YHR098C DAD2P36162 133 aa5.02□□□□□ -1.61
SFB3YHR098C MIX23P38162 196 aa5.02□□□□□ -1.61
SFB3YHR098C YAR1P46683 200 aa5.02□□□□□ -1.61
SFB3YHR098C YNL184CP53876 108 aa5.02□□□□□ -1.61
SFB3YHR098C GIM5Q04493 163 aa5.02□□□□□ -1.61
SFB3YHR098C VAM3Q12241 283 aa5.02□□□□□ -1.61
SFB3YHR098C PRR2Q12310 699 aa5.02□□□□□ -1.61
SFB3YHR098C SME1Q12330 94 aaPredicted RBP5.02□□□□□ -1.61
SFB3YHR098C PEX11Q12462 236 aa5.02□□□□□ -1.61
SFB3YHR098C WIP1Q2V2P8 89 aa5.02□□□□□ -1.61
SFB3YHR098C BTT1P40314 149 aaPredicted RBP5.01□□□□□ -1.61
SFB3YHR098C FET4P40988 552 aa5.01□□□□□ -1.61
SFB3YHR098C TRI1Q05024 226 aa5.01□□□□□ -1.61
SFB3YHR098C ENB1Q08299 606 aa5.01□□□□□ -1.61
SFB3YHR098C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
SFB3YHR098C HUT1Q12520 339 aa5.01□□□□□ -1.61
SFB3YHR098C CSR2Q12734 1121 aa5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms