RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeast

Gene VMA21, Length 234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA21	YGR105W	SRL4	Q03085	281 aa		0.94	□□□□□ -2.26
VMA21	YGR105W	YDR248C	Q03786	193 aa		0.94	□□□□□ -2.26
VMA21	YGR105W	TDA8	Q6B2U8	126 aa		0.94	□□□□□ -2.26
VMA21	YGR105W	GAS3	Q03655	524 aa		0.93	□□□□□ -2.26
VMA21	YGR105W	MED4	Q12343	284 aa		0.93	□□□□□ -2.26
VMA21	YGR105W	ACC1	Q00955	2233 aa	Known RBP	0.92	□□□□□ -2.26
VMA21	YGR105W	TIM9	O74700	87 aa		0.92	□□□□□ -2.26
VMA21	YGR105W	SPT3	P06844	337 aa		0.92	□□□□□ -2.26
VMA21	YGR105W	URA6	P15700	204 aa		0.92	□□□□□ -2.26
VMA21	YGR105W	TFC1	P32367	649 aa		0.92	□□□□□ -2.26
VMA21	YGR105W	RIO2	P40160	425 aa	Known RBP	0.92	□□□□□ -2.26
VMA21	YGR105W	FMC1	P40491	155 aa		0.92	□□□□□ -2.26
VMA21	YGR105W	TSC3	Q3E790	80 aa		0.92	□□□□□ -2.26
VMA21	YGR105W	YNL146C-A	Q3E7Z1	64 aa		0.92	□□□□□ -2.26
VMA21	YGR105W	INO80	P53115	1489 aa		0.92	□□□□□ -2.26
VMA21	YGR105W	CDC28	P00546	298 aa	Known RBP	0.91	□□□□□ -2.26
VMA21	YGR105W	AQY2	P0CD90	149 aa		0.91	□□□□□ -2.26
VMA21	YGR105W	MATALPHA1	P0CY06	175 aa		0.91	□□□□□ -2.26
VMA21	YGR105W	HMLALPHA1	P0CY07	175 aa		0.91	□□□□□ -2.26
VMA21	YGR105W	SNC2	P33328	115 aa		0.91	□□□□□ -2.26
VMA21	YGR105W	TVP38	P36164	337 aa		0.91	□□□□□ -2.26
VMA21	YGR105W	LIA1	P47120	325 aa	Known RBP	0.91	□□□□□ -2.26
VMA21	YGR105W	KNH1	P50112	268 aa		0.91	□□□□□ -2.26
VMA21	YGR105W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.91	□□□□□ -2.26	not detected
VMA21	YGR105W	FSF1	Q12029	327 aa	Known RBP	0.91	□□□□□ -2.26
VMA21	YGR105W	YDL180W	Q12301	547 aa		0.91	□□□□□ -2.26
VMA21	YGR105W	YCR016W	P25617	290 aa	Known RBP	0.9	□□□□□ -2.27
VMA21	YGR105W	YBR209W	P38311	105 aa		0.9	□□□□□ -2.27
VMA21	YGR105W	YEL067C	P39978	195 aa		0.9	□□□□□ -2.27
VMA21	YGR105W	GVP36	P40531	326 aa	Known RBP	0.9	□□□□□ -2.27
VMA21	YGR105W	PRM8	P53174	237 aa		0.9	□□□□□ -2.27
VMA21	YGR105W	CUS2	P53830	285 aa	Predicted RBP	0.9	□□□□□ -2.27
VMA21	YGR105W	PET117	Q02771	107 aa		0.9	□□□□□ -2.27
VMA21	YGR105W	MCP1	Q12106	302 aa		0.9	□□□□□ -2.27
VMA21	YGR105W	CFT1	Q06632	1357 aa	Known RBP	0.9	□□□□□ -2.27
VMA21	YGR105W	RPC17	P47076	161 aa		0.89	□□□□□ -2.27
VMA21	YGR105W	FYV6	P53913	173 aa		0.89	□□□□□ -2.27
VMA21	YGR105W	NSP1	P14907	823 aa	Known RBP	0.88	□□□□□ -2.27
VMA21	YGR105W	DBF2	P22204	572 aa		0.88	□□□□□ -2.27
VMA21	YGR105W	SEC17	P32602	292 aa		0.88	□□□□□ -2.27
VMA21	YGR105W	UTP30	P36144	274 aa	Known RBP	0.88	□□□□□ -2.27
VMA21	YGR105W	SKG1	P36169	355 aa		0.88	□□□□□ -2.27
VMA21	YGR105W	ALG13	P53178	202 aa		0.88	□□□□□ -2.27
VMA21	YGR105W	CDC123	Q05791	360 aa		0.88	□□□□□ -2.27
VMA21	YGR105W	YLR283W	Q05867	314 aa		0.88	□□□□□ -2.27
VMA21	YGR105W	GPM2	Q12008	311 aa		0.88	□□□□□ -2.27
VMA21	YGR105W	ATG40	Q99325	256 aa		0.88	□□□□□ -2.27
VMA21	YGR105W	SLH1	P53327	1967 aa	Known RBP	0.88	□□□□□ -2.27
VMA21	YGR105W	SIR2	P06700	562 aa		0.87	□□□□□ -2.27
VMA21	YGR105W	MSN4	P33749	630 aa		0.87	□□□□□ -2.27
VMA21	YGR105W	PRE6	P40303	254 aa	Known RBP	0.87	□□□□□ -2.27
VMA21	YGR105W	YLR236C	A0A023PZG4	107 aa		0.86	□□□□□ -2.27
VMA21	YGR105W	FAR7	P43592	221 aa		0.86	□□□□□ -2.27
VMA21	YGR105W	BXI1	P48558	297 aa		0.86	□□□□□ -2.27
VMA21	YGR105W	BRR6	P53062	197 aa		0.86	□□□□□ -2.27
VMA21	YGR105W	PBN1	P25580	416 aa		0.85	□□□□□ -2.27
VMA21	YGR105W	TCA17	P32613	152 aa		0.85	□□□□□ -2.27
VMA21	YGR105W	KDX1	P36005	433 aa		0.85	□□□□□ -2.27
VMA21	YGR105W	VMA22	P38784	181 aa		0.85	□□□□□ -2.27
VMA21	YGR105W	HUA1	P40325	198 aa		0.85	□□□□□ -2.27
VMA21	YGR105W	MIC26	P50087	233 aa		0.85	□□□□□ -2.27
VMA21	YGR105W	RPL37B	P51402	88 aa	Known RBP	0.85	□□□□□ -2.27
VMA21	YGR105W	RRN5	Q02983	363 aa		0.85	□□□□□ -2.27
VMA21	YGR105W	YIL177C	P40434	1758 aa		0.85	□□□□□ -2.27
VMA21	YGR105W	YJL225C	P40889	1758 aa		0.85	□□□□□ -2.27
VMA21	YGR105W	YER188C-A	P0C0V2	99 aa		0.84	□□□□□ -2.27
VMA21	YGR105W	APS1	P35181	156 aa		0.84	□□□□□ -2.27
VMA21	YGR105W	COX15	P40086	486 aa		0.84	□□□□□ -2.27
VMA21	YGR105W	YDR274C	P87283	123 aa		0.84	□□□□□ -2.27
VMA21	YGR105W	RAD28	Q12021	506 aa		0.84	□□□□□ -2.27
VMA21	YGR105W	RHO1	P06780	209 aa	Known RBP	0.83	□□□□□ -2.28
VMA21	YGR105W	SEC11	P15367	167 aa		0.83	□□□□□ -2.28
VMA21	YGR105W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.83	□□□□□ -2.28	not detected
VMA21	YGR105W	SSO1	P32867	290 aa		0.83	□□□□□ -2.28
VMA21	YGR105W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.83	□□□□□ -2.28	not detected
VMA21	YGR105W	OPY1	P38271	328 aa		0.83	□□□□□ -2.28
VMA21	YGR105W	MIC12	P38341	106 aa		0.83	□□□□□ -2.28
VMA21	YGR105W	YBR285W	P38354	144 aa		0.83	□□□□□ -2.28
VMA21	YGR105W	SOK1	P40317	901 aa		0.83	□□□□□ -2.28
VMA21	YGR105W	YMR31	P19955	123 aa		0.82	□□□□□ -2.28
VMA21	YGR105W	SIP3	P38717	1229 aa		0.82	□□□□□ -2.28
VMA21	YGR105W	YAE1	P47118	141 aa	Predicted RBP	0.82	□□□□□ -2.28
VMA21	YGR105W	YMR007W	Q03675	126 aa		0.82	□□□□□ -2.28
VMA21	YGR105W	CUE4	Q04201	117 aa	Predicted RBP	0.82	□□□□□ -2.28
VMA21	YGR105W	YHR214C-E	Q8TGK0	99 aa		0.82	□□□□□ -2.28
VMA21	YGR105W	YFR032C-B	Q8TGU2	87 aa		0.82	□□□□□ -2.28
VMA21	YGR105W	THP2	O13539	261 aa	Known RBP	0.81	□□□□□ -2.28
VMA21	YGR105W	YHR212W-A	P0CX91	67 aa		0.81	□□□□□ -2.28
VMA21	YGR105W	KSS1	P14681	368 aa		0.81	□□□□□ -2.28
VMA21	YGR105W	BET1	P22804	142 aa		0.81	□□□□□ -2.28
VMA21	YGR105W	VMA6	P32366	345 aa	Known RBP	0.81	□□□□□ -2.28
VMA21	YGR105W	RMD6	P39975	231 aa		0.81	□□□□□ -2.28
VMA21	YGR105W	FLX1	P40464	311 aa		0.81	□□□□□ -2.28
VMA21	YGR105W	ARO8	P53090	500 aa	Known RBP	0.81	□□□□□ -2.28
VMA21	YGR105W	RCE1	Q03530	315 aa		0.81	□□□□□ -2.28
VMA21	YGR105W	YDR249C	Q03787	373 aa		0.81	□□□□□ -2.28
VMA21	YGR105W	RPL28	P02406	149 aa	Known RBP	0.8	□□□□□ -2.28
VMA21	YGR105W	URA5	P13298	226 aa	Known RBP	0.8	□□□□□ -2.28
VMA21	YGR105W	AST2	P39945	430 aa	Known RBP	0.8	□□□□□ -2.28
VMA21	YGR105W	YFL065C	P43539	102 aa		0.8	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 250 ms