RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B YLR156WP0CE96 114 aa0.28□□□□□ -2.36
SBH1YER087C-B YLR159WP0CE97 114 aa0.28□□□□□ -2.36
SBH1YER087C-B YLR161WP0CE98 114 aa0.28□□□□□ -2.36
SBH1YER087C-B RPL2AP0CX45 254 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B RPL2BP0CX46 254 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B MATALPHA1P0CY06 175 aa0.28□□□□□ -2.36
SBH1YER087C-B HMLALPHA1P0CY07 175 aa0.28□□□□□ -2.36
SBH1YER087C-B GPA2P10823 449 aa0.28□□□□□ -2.36
SBH1YER087C-B NHP6BP11633 99 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B TCP1P12612 559 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B URA5P13298 226 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B KSS1P14681 368 aa0.28□□□□□ -2.36
SBH1YER087C-B GCN3P14741 305 aa0.28□□□□□ -2.36
SBH1YER087C-B RPB3P16370 318 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B YMR31P19955 123 aa0.28□□□□□ -2.36
SBH1YER087C-B FPR1P20081 114 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B MRPS28P21771 286 aa0.28□□□□□ -2.36
SBH1YER087C-B CNB1P25296 175 aa0.28□□□□□ -2.36
SBH1YER087C-B ATG22P25568 528 aa0.28□□□□□ -2.36
SBH1YER087C-B PPA2P28239 310 aa0.28□□□□□ -2.36
SBH1YER087C-B APS1P35181 156 aa0.28□□□□□ -2.36
SBH1YER087C-B SKG1P36169 355 aa0.28□□□□□ -2.36
SBH1YER087C-B MRPL17P36528 281 aa0.28□□□□□ -2.36
SBH1YER087C-B SIP3P38717 1229 aa0.28□□□□□ -2.36
SBH1YER087C-B YHL042WP38729 150 aa0.28□□□□□ -2.36
SBH1YER087C-B IKI1P38874 309 aa0.28□□□□□ -2.36
SBH1YER087C-B YER034WP40022 185 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B VTC1P40046 129 aaRIP-Chip data0.28□□□□□ -2.36not detected
SBH1YER087C-B LSM4P40070 187 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B COX15P40086 486 aa0.28□□□□□ -2.36
SBH1YER087C-B FLX1P40464 311 aa0.28□□□□□ -2.36
SBH1YER087C-B AGE2P40529 298 aa0.28□□□□□ -2.36
SBH1YER087C-B GVP36P40531 326 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B MSS2P40990 351 aa0.28□□□□□ -2.36
SBH1YER087C-B ERG10P41338 398 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B YFR054CP43622 192 aa0.28□□□□□ -2.36
SBH1YER087C-B BXI1P48558 297 aa0.28□□□□□ -2.36
SBH1YER087C-B RAD17P48581 401 aa0.28□□□□□ -2.36
SBH1YER087C-B TRM9P49957 279 aa0.28□□□□□ -2.36
SBH1YER087C-B UBC12P52491 188 aa0.28□□□□□ -2.36
SBH1YER087C-B AIF1P52923 378 aa0.28□□□□□ -2.36
SBH1YER087C-B MGA1P53050 456 aa0.28□□□□□ -2.36
SBH1YER087C-B BOL2P53082 120 aa0.28□□□□□ -2.36
SBH1YER087C-B YGR050CP53231 118 aa0.28□□□□□ -2.36
SBH1YER087C-B SAY1P53324 424 aa0.28□□□□□ -2.36
SBH1YER087C-B PGA2P53903 129 aa0.28□□□□□ -2.36
SBH1YER087C-B COG5P53951 403 aa0.28□□□□□ -2.36
SBH1YER087C-B SNZ1Q03148 297 aa0.28□□□□□ -2.36
SBH1YER087C-B MRPS17Q03246 237 aaPredicted RBP0.28□□□□□ -2.36
SBH1YER087C-B YDR248CQ03786 193 aa0.28□□□□□ -2.36
SBH1YER087C-B YDR249CQ03787 373 aa0.28□□□□□ -2.36
SBH1YER087C-B TRM12Q04235 462 aa0.28□□□□□ -2.36
SBH1YER087C-B RNH1Q04740 348 aa0.28□□□□□ -2.36
SBH1YER087C-B YMR315WQ04869 349 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B YMR226CQ05016 267 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B YLR162WQ06235 118 aa0.28□□□□□ -2.36
SBH1YER087C-B YLR179CQ06252 201 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B GGA1Q06336 557 aa0.28□□□□□ -2.36
SBH1YER087C-B CSI2Q08054 341 aa0.28□□□□□ -2.36
SBH1YER087C-B ABP140Q08641 628 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B MCP1Q12106 302 aa0.28□□□□□ -2.36
SBH1YER087C-B RIO1Q12196 484 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B YDL180WQ12301 547 aa0.28□□□□□ -2.36
SBH1YER087C-B YKL183C-AQ3E765 70 aa0.28□□□□□ -2.36
SBH1YER087C-B TSC3Q3E790 80 aa0.28□□□□□ -2.36
SBH1YER087C-B TDA8Q6B2U8 126 aa0.28□□□□□ -2.36
SBH1YER087C-B ATG40Q99325 256 aa0.28□□□□□ -2.36
SBH1YER087C-B SWI1P09547 1314 aa0.28□□□□□ -2.36
SBH1YER087C-B YDR157WA0A023PZE8 133 aa0.27□□□□□ -2.37
SBH1YER087C-B YLR236CA0A023PZG4 107 aa0.27□□□□□ -2.37
SBH1YER087C-B RHO1P06780 209 aaKnown RBP0.27□□□□□ -2.37
SBH1YER087C-B CDC33P07260 213 aaKnown RBP0.27□□□□□ -2.37
SBH1YER087C-B YPR170W-BP0C5R9 85 aa0.27□□□□□ -2.37
SBH1YER087C-B SEC11P15367 167 aa0.27□□□□□ -2.37
SBH1YER087C-B STE18P18852 110 aa0.27□□□□□ -2.37
SBH1YER087C-B COQ1P18900 473 aa0.27□□□□□ -2.37
SBH1YER087C-B ATP15P21306 62 aa0.27□□□□□ -2.37
SBH1YER087C-B MAG1P22134 296 aaKnown RBP0.27□□□□□ -2.37
SBH1YER087C-B BET1P22804 142 aa0.27□□□□□ -2.37
SBH1YER087C-B ASF2P32448 525 aaPredicted RBP0.27□□□□□ -2.37
SBH1YER087C-B MGM101P32787 269 aaKnown RBP0.27□□□□□ -2.37
SBH1YER087C-B FZF1P32805 299 aa0.27□□□□□ -2.37
SBH1YER087C-B PTM1P32857 523 aa0.27□□□□□ -2.37
SBH1YER087C-B PRP18P33411 251 aaPredicted RBP0.27□□□□□ -2.37
SBH1YER087C-B MSN4P33749 630 aa0.27□□□□□ -2.37
SBH1YER087C-B BMH2P34730 273 aaKnown RBP0.27□□□□□ -2.37
SBH1YER087C-B KDX1P36005 433 aa0.27□□□□□ -2.37
SBH1YER087C-B UTP30P36144 274 aaKnown RBP0.27□□□□□ -2.37
SBH1YER087C-B OPY1P38271 328 aa0.27□□□□□ -2.37
SBH1YER087C-B YBR219CP38317 127 aa0.27□□□□□ -2.37
SBH1YER087C-B MIC12P38341 106 aa0.27□□□□□ -2.37
SBH1YER087C-B YBR285WP38354 144 aa0.27□□□□□ -2.37
SBH1YER087C-B TCD1P38756 429 aa0.27□□□□□ -2.37
SBH1YER087C-B VMA22P38784 181 aa0.27□□□□□ -2.37
SBH1YER087C-B TRM5P38793 499 aa0.27□□□□□ -2.37
SBH1YER087C-B RTC3P38804 111 aaPredicted RBP0.27□□□□□ -2.37
SBH1YER087C-B EDC3P39998 551 aaKnown RBP0.27□□□□□ -2.37
SBH1YER087C-B ERG28P40030 148 aa0.27□□□□□ -2.37
SBH1YER087C-B GLE2P40066 365 aa0.27□□□□□ -2.37
SBH1YER087C-B RTR1P40084 226 aaPredicted RBP0.27□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms