RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	YER121W	P40076	114 aa		6.09	□□□□□ -1.43
SKP1	YDR328C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	6.09	□□□□□ -1.43	not detected
SKP1	YDR328C	SBH2	P52871	88 aa		6.09	□□□□□ -1.43
SKP1	YDR328C	GEP7	P53171	287 aa		6.09	□□□□□ -1.43
SKP1	YDR328C	ORM1	P53224	222 aa		6.09	□□□□□ -1.43
SKP1	YDR328C	DPB4	Q04603	196 aa	Known RBP	6.09	□□□□□ -1.43
SKP1	YDR328C	NOC4	Q06512	552 aa	Predicted RBP	6.09	□□□□□ -1.43
SKP1	YDR328C	YNG1	Q08465	219 aa		6.09	□□□□□ -1.43
SKP1	YDR328C	YOR292C	Q08743	309 aa		6.09	□□□□□ -1.43
SKP1	YDR328C	FEX1	Q08913	375 aa		6.09	□□□□□ -1.43
SKP1	YDR328C	YCT1	Q12235	531 aa		6.09	□□□□□ -1.43
SKP1	YDR328C	DGK1	Q12382	290 aa		6.09	□□□□□ -1.43
SKP1	YDR328C	TFC7	Q12415	435 aa		6.09	□□□□□ -1.43
SKP1	YDR328C	HUG1	Q6Q5K6	68 aa		6.09	□□□□□ -1.43
SKP1	YDR328C	NUM1	Q00402	2748 aa		6.09	□□□□□ -1.43
SKP1	YDR328C	APA2	P22108	325 aa		6.08	□□□□□ -1.44
SKP1	YDR328C	ERG2	P32352	222 aa		6.08	□□□□□ -1.44
SKP1	YDR328C	IRC24	P40580	263 aa		6.08	□□□□□ -1.44
SKP1	YDR328C	ECM27	P47144	725 aa		6.08	□□□□□ -1.44
SKP1	YDR328C	TIM10	P87108	93 aa		6.08	□□□□□ -1.44
SKP1	YDR328C	MEH1	Q02205	184 aa		6.08	□□□□□ -1.44
SKP1	YDR328C	PLP1	Q04004	230 aa		6.08	□□□□□ -1.44
SKP1	YDR328C	TSA2	Q04120	196 aa		6.08	□□□□□ -1.44
SKP1	YDR328C	ECM18	Q04623	453 aa		6.08	□□□□□ -1.44
SKP1	YDR328C	RIM9	Q04734	239 aa		6.08	□□□□□ -1.44
SKP1	YDR328C	TMC1	Q08422	150 aa	Predicted RBP	6.08	□□□□□ -1.44
SKP1	YDR328C	RFM1	Q12192	310 aa		6.08	□□□□□ -1.44
SKP1	YDR328C	OLE1	P21147	510 aa	Known RBP	6.07	□□□□□ -1.44
SKP1	YDR328C	GAR1	P28007	205 aa	Known RBP	6.07	□□□□□ -1.44
SKP1	YDR328C	MRP20	P32387	263 aa		6.07	□□□□□ -1.44
SKP1	YDR328C	YIL012W	P40551	113 aa		6.07	□□□□□ -1.44
SKP1	YDR328C	YIR035C	P40579	254 aa		6.07	□□□□□ -1.44
SKP1	YDR328C	PIR5	P46999	287 aa		6.07	□□□□□ -1.44
SKP1	YDR328C	TIM11	P81449	96 aa	Predicted RBP	6.07	□□□□□ -1.44
SKP1	YDR328C	SWT1	Q12104	458 aa		6.07	□□□□□ -1.44
SKP1	YDR328C	BBP1	Q12365	385 aa		6.07	□□□□□ -1.44
SKP1	YDR328C	YGL194C-A	Q2V2P6	80 aa		6.07	□□□□□ -1.44
SKP1	YDR328C	SEC22	P22214	214 aa		6.06	□□□□□ -1.44
SKP1	YDR328C	ISC10	P32645	267 aa		6.06	□□□□□ -1.44
SKP1	YDR328C	REC104	P33323	182 aa		6.06	□□□□□ -1.44
SKP1	YDR328C	RPL13B	P40212	199 aa	Known RBP	6.06	□□□□□ -1.44
SKP1	YDR328C	SWM2	P40342	146 aa		6.06	□□□□□ -1.44
SKP1	YDR328C	SMM1	P53720	384 aa	Known RBP	6.06	□□□□□ -1.44
SKP1	YDR328C	YNR064C	P53750	290 aa		6.06	□□□□□ -1.44
SKP1	YDR328C	RPL21A	Q02753	160 aa	Known RBP	6.06	□□□□□ -1.44
SKP1	YDR328C	COA4	Q05809	96 aa		6.06	□□□□□ -1.44
SKP1	YDR328C	YOL029C	Q08187	201 aa		6.06	□□□□□ -1.44
SKP1	YDR328C	RPL21B	Q12672	160 aa	Known RBP	6.06	□□□□□ -1.44
SKP1	YDR328C	RPL13A	Q12690	199 aa	Predicted RBP	6.06	□□□□□ -1.44
SKP1	YDR328C	YCL048W-A	Q2V2Q2	79 aa		6.06	□□□□□ -1.44
SKP1	YDR328C	ISN1	Q99312	450 aa		6.06	□□□□□ -1.44
SKP1	YDR328C	GDH1	P07262	454 aa	Known RBP	6.05	□□□□□ -1.44
SKP1	YDR328C	ATP10	P18496	279 aa		6.05	□□□□□ -1.44
SKP1	YDR328C	TIP1	P27654	210 aa	Predicted RBP	6.05	□□□□□ -1.44
SKP1	YDR328C	GPI18	P38211	433 aa		6.05	□□□□□ -1.44
SKP1	YDR328C	IKI1	P38874	309 aa		6.05	□□□□□ -1.44
SKP1	YDR328C	PHM8	P40025	321 aa		6.05	□□□□□ -1.44
SKP1	YDR328C	YIR020C	P40575	100 aa		6.05	□□□□□ -1.44
SKP1	YDR328C	YFL015C	P43578	164 aa		6.05	□□□□□ -1.44
SKP1	YDR328C	NCA3	P46955	337 aa		6.05	□□□□□ -1.44
SKP1	YDR328C	TAD2	P47058	250 aa		6.05	□□□□□ -1.44
SKP1	YDR328C	YJR111C	P47148	283 aa	Known RBP	6.05	□□□□□ -1.44
SKP1	YDR328C	TTI2	P47168	421 aa		6.05	□□□□□ -1.44
SKP1	YDR328C	YGL262W	P53054	175 aa		6.05	□□□□□ -1.44
SKP1	YDR328C	VPS28	Q02767	242 aa		6.05	□□□□□ -1.44
SKP1	YDR328C	PRP11	Q07350	266 aa	Predicted RBP	6.05	□□□□□ -1.44
SKP1	YDR328C	RTR2	Q12378	196 aa		6.05	□□□□□ -1.44
SKP1	YDR328C	SPO24	Q3E752	67 aa		6.05	□□□□□ -1.44
SKP1	YDR328C	YBR298C-A	Q8TGK4	73 aa		6.05	□□□□□ -1.44
SKP1	YDR328C	COQ2	P32378	372 aa		6.04	□□□□□ -1.44
SKP1	YDR328C	SPS18	P32572	300 aa		6.04	□□□□□ -1.44
SKP1	YDR328C	PDC2	P32896	925 aa		6.04	□□□□□ -1.44
SKP1	YDR328C	SOR1	P35497	357 aa	Known RBP	6.04	□□□□□ -1.44
SKP1	YDR328C	ERV15	P38312	142 aa		6.04	□□□□□ -1.44
SKP1	YDR328C	PCL7	P40186	285 aa		6.04	□□□□□ -1.44
SKP1	YDR328C	YJR012C	P47087	207 aa		6.04	□□□□□ -1.44
SKP1	YDR328C	CWC25	P53854	179 aa	Known RBP	6.04	□□□□□ -1.44
SKP1	YDR328C	INN1	P53901	409 aa		6.04	□□□□□ -1.44
SKP1	YDR328C	ACT1	P60010	375 aa	Known RBP	6.04	□□□□□ -1.44
SKP1	YDR328C	HED1	Q03937	162 aa		6.04	□□□□□ -1.44
SKP1	YDR328C	YDR415C	Q04033	374 aa	Predicted RBP	6.04	□□□□□ -1.44
SKP1	YDR328C	ANT1	Q06497	328 aa		6.04	□□□□□ -1.44
SKP1	YDR328C	SOR2	Q07786	357 aa		6.04	□□□□□ -1.44
SKP1	YDR328C	RRT7	Q07829	113 aa		6.04	□□□□□ -1.44
SKP1	YDR328C	HRD1	Q08109	551 aa		6.04	□□□□□ -1.44
SKP1	YDR328C	YJR112W-A	Q3E743	109 aa		6.04	□□□□□ -1.44
SKP1	YDR328C	BOL1	Q3E793	110 aa		6.04	□□□□□ -1.44
SKP1	YDR328C	Q0297	Q9ZZV8	51 aa		6.04	□□□□□ -1.44
SKP1	YDR328C	MAG1	P22134	296 aa	Known RBP	6.03	□□□□□ -1.44
SKP1	YDR328C	ROX3	P25046	220 aa		6.03	□□□□□ -1.44
SKP1	YDR328C	LSB5	P25369	354 aa		6.03	□□□□□ -1.44
SKP1	YDR328C	IES6	P32617	166 aa		6.03	□□□□□ -1.44
SKP1	YDR328C	YHL044W	P38727	235 aa		6.03	□□□□□ -1.44
SKP1	YDR328C	SSO2	P39926	295 aa		6.03	□□□□□ -1.44
SKP1	YDR328C	YJL118W	P47022	219 aa		6.03	□□□□□ -1.44
SKP1	YDR328C	SUT1	P53032	299 aa	Known RBP	6.03	□□□□□ -1.44
SKP1	YDR328C	PNC1	P53184	216 aa	Known RBP	6.03	□□□□□ -1.44
SKP1	YDR328C	YIF1	P53845	314 aa	Known RBP	6.03	□□□□□ -1.44
SKP1	YDR328C	GPI15	P53961	229 aa		6.03	□□□□□ -1.44
SKP1	YDR328C	YDL009C	Q12210	107 aa		6.03	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms