RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W GZF3P42944 551 aaKnown RBP3.74□□□□□ -1.81
TRS85YDR108W LST7P53237 242 aa3.74□□□□□ -1.81
TRS85YDR108W VHT1P53241 593 aa3.74□□□□□ -1.81
TRS85YDR108W HHT1P61830 136 aa3.74□□□□□ -1.81
TRS85YDR108W APS2Q00381 147 aa3.74□□□□□ -1.81
TRS85YDR108W IRC15Q02733 499 aa3.74□□□□□ -1.81
TRS85YDR108W MRX8Q05473 314 aa3.74□□□□□ -1.81
TRS85YDR108W LDS2Q08218 356 aa3.74□□□□□ -1.81
TRS85YDR108W SEC4P07560 215 aaKnown RBP3.73□□□□□ -1.81
TRS85YDR108W RPL27AP0C2H6 136 aaKnown RBP3.73□□□□□ -1.81
TRS85YDR108W RPL27BP0C2H7 136 aaKnown RBP3.73□□□□□ -1.81
TRS85YDR108W ATS1P31386 333 aa3.73□□□□□ -1.81
TRS85YDR108W TOA2P32774 122 aa3.73□□□□□ -1.81
TRS85YDR108W LDH1P38139 375 aa3.73□□□□□ -1.81
TRS85YDR108W PTH1P38876 190 aaKnown RBP3.73□□□□□ -1.81
TRS85YDR108W CTF8P38877 133 aa3.73□□□□□ -1.81
TRS85YDR108W PAC2P39937 518 aa3.73□□□□□ -1.81
TRS85YDR108W RPL13BP40212 199 aaKnown RBP3.73□□□□□ -1.81
TRS85YDR108W YIL165CP40446 119 aa3.73□□□□□ -1.81
TRS85YDR108W YPS6P40583 537 aa3.73□□□□□ -1.81
TRS85YDR108W MAF1P41910 395 aa3.73□□□□□ -1.81
TRS85YDR108W RMD9P53140 646 aaKnown RBP3.73□□□□□ -1.81
TRS85YDR108W BIO5P53744 561 aaKnown RBP3.73□□□□□ -1.81
TRS85YDR108W IGO1P53897 168 aa3.73□□□□□ -1.81
TRS85YDR108W YNL140CP53910 189 aa3.73□□□□□ -1.81
TRS85YDR108W SKO1Q02100 647 aa3.73□□□□□ -1.81
TRS85YDR108W YPR114WQ06107 315 aa3.73□□□□□ -1.81
TRS85YDR108W RRT7Q07829 113 aa3.73□□□□□ -1.81
TRS85YDR108W YLR040CQ07988 224 aa3.73□□□□□ -1.81
TRS85YDR108W YDL177CQ12257 170 aa3.73□□□□□ -1.81
TRS85YDR108W INO4P13902 151 aa3.72□□□□□ -1.81
TRS85YDR108W GPI12P23797 304 aa3.72□□□□□ -1.81
TRS85YDR108W PCL1P24867 279 aa3.72□□□□□ -1.81
TRS85YDR108W CNE1P27825 502 aa3.72□□□□□ -1.81
TRS85YDR108W SLC1P33333 303 aa3.72□□□□□ -1.81
TRS85YDR108W YKL187CP34231 750 aa3.72□□□□□ -1.81
TRS85YDR108W PAU24P38155 120 aa3.72□□□□□ -1.81
TRS85YDR108W TRR2P38816 342 aa3.72□□□□□ -1.81
TRS85YDR108W LTP1P40347 161 aa3.72□□□□□ -1.81
TRS85YDR108W PRM5P40476 318 aa3.72□□□□□ -1.81
TRS85YDR108W FIS1P40515 155 aa3.72□□□□□ -1.81
TRS85YDR108W PHS1P40857 217 aa3.72□□□□□ -1.81
TRS85YDR108W ATG27P46989 271 aa3.72□□□□□ -1.81
TRS85YDR108W UBX6P47049 396 aa3.72□□□□□ -1.81
TRS85YDR108W COQ5P49017 307 aa3.72□□□□□ -1.81
TRS85YDR108W TAM41P53230 385 aa3.72□□□□□ -1.81
TRS85YDR108W TEX1P53851 422 aaKnown RBP3.72□□□□□ -1.81
TRS85YDR108W RNH201P53942 307 aa3.72□□□□□ -1.81
TRS85YDR108W YLR460CP54007 376 aa3.72□□□□□ -1.81
TRS85YDR108W YPR174CQ06616 221 aaPredicted RBP3.72□□□□□ -1.81
TRS85YDR108W RPL7BQ12213 244 aaKnown RBP3.72□□□□□ -1.81
TRS85YDR108W UBR2Q07963 1872 aa3.72□□□□□ -1.81
TRS85YDR108W COX1P00401 534 aa3.72□□□□□ -1.81
TRS85YDR108W RPL1AP0CX43 217 aaKnown RBP3.72□□□□□ -1.81
TRS85YDR108W RPL1BP0CX44 217 aaKnown RBP3.72□□□□□ -1.81
TRS85YDR108W VMA3P25515 160 aa3.72□□□□□ -1.81
TRS85YDR108W MRP49P32388 137 aa3.72□□□□□ -1.81
TRS85YDR108W PRP18P33411 251 aaPredicted RBP3.72□□□□□ -1.81
TRS85YDR108W MTR2P34232 184 aaKnown RBP3.72□□□□□ -1.81
TRS85YDR108W SOR1P35497 357 aaKnown RBP3.72□□□□□ -1.81
TRS85YDR108W NNK1P36003 928 aa3.72□□□□□ -1.81
TRS85YDR108W BAT1P38891 393 aaKnown RBP3.72□□□□□ -1.81
TRS85YDR108W OXA1P39952 402 aa3.72□□□□□ -1.81
TRS85YDR108W ATF1P40353 525 aa3.72□□□□□ -1.81
TRS85YDR108W TTI2P47168 421 aa3.72□□□□□ -1.81
TRS85YDR108W YGL235WP53071 178 aa3.72□□□□□ -1.81
TRS85YDR108W CRZ1P53968 678 aa3.72□□□□□ -1.81
TRS85YDR108W YMR166CQ03829 368 aa3.72□□□□□ -1.81
TRS85YDR108W TSA2Q04120 196 aa3.72□□□□□ -1.81
TRS85YDR108W YMR252CQ04814 134 aa3.72□□□□□ -1.81
TRS85YDR108W SUE1Q06524 206 aa3.72□□□□□ -1.81
TRS85YDR108W SOR2Q07786 357 aa3.72□□□□□ -1.81
TRS85YDR108W PER33Q12144 273 aa3.72□□□□□ -1.81
TRS85YDR108W YLR146W-AQ2V2P1 62 aa3.72□□□□□ -1.81
TRS85YDR108W ISD11Q6Q560 94 aa3.72□□□□□ -1.81
TRS85YDR108W ADH1P00330 348 aaKnown RBP3.71□□□□□ -1.82
TRS85YDR108W SOD2P00447 233 aa3.71□□□□□ -1.82
TRS85YDR108W PUB1P32588 453 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
TRS85YDR108W YKU70P32807 602 aa3.71□□□□□ -1.82
TRS85YDR108W TIR2P33890 251 aa3.71□□□□□ -1.82
TRS85YDR108W KKQ8P36004 724 aa3.71□□□□□ -1.82
TRS85YDR108W PEX7P39108 375 aa3.71□□□□□ -1.82
TRS85YDR108W YNL198CP40166 100 aa3.71□□□□□ -1.82
TRS85YDR108W PRE5P40302 234 aaKnown RBP3.71□□□□□ -1.82
TRS85YDR108W TES1P41903 349 aaKnown RBP3.71□□□□□ -1.82
TRS85YDR108W MEP2P41948 499 aa3.71□□□□□ -1.82
TRS85YDR108W RRT5P43607 289 aa3.71□□□□□ -1.82
TRS85YDR108W ERG26P53199 349 aaKnown RBP3.71□□□□□ -1.82
TRS85YDR108W YGR015CP53208 328 aa3.71□□□□□ -1.82
TRS85YDR108W PDR17P53844 350 aa3.71□□□□□ -1.82
TRS85YDR108W COQ11Q05892 277 aa3.71□□□□□ -1.82
TRS85YDR108W PAM18Q07914 168 aa3.71□□□□□ -1.82
TRS85YDR108W YOL024WQ08172 172 aa3.71□□□□□ -1.82
TRS85YDR108W MCP1Q12106 302 aa3.71□□□□□ -1.82
TRS85YDR108W IZH2Q12442 317 aa3.71□□□□□ -1.82
TRS85YDR108W RAX2Q12465 1220 aa3.71□□□□□ -1.82
TRS85YDR108W HKR1P41809 1802 aa3.71□□□□□ -1.82
TRS85YDR108W HVG1P0CE11 249 aa3.71□□□□□ -1.82
TRS85YDR108W MCK1P21965 375 aaKnown RBP3.71□□□□□ -1.82
TRS85YDR108W PPA2P28239 310 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 80.6 ms