RNA–Protein interactions for RNA: YDR029W

YDR029W, Transcript of Dubious open reading frame, yeast

Gene YDR029W, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR029W	YDR029W	GPM2	Q12008	311 aa		0.75	□□□□□ -2.29
YDR029W	YDR029W	ATG40	Q99325	256 aa		0.75	□□□□□ -2.29
YDR029W	YDR029W	SIP3	P38717	1229 aa		0.74	□□□□□ -2.29
YDR029W	YDR029W	RTT105	P40063	208 aa		0.74	□□□□□ -2.29
YDR029W	YDR029W	YFL065C	P43539	102 aa		0.74	□□□□□ -2.29
YDR029W	YDR029W	RCE1	Q03530	315 aa		0.74	□□□□□ -2.29
YDR029W	YDR029W	YOR029W	Q12243	111 aa		0.74	□□□□□ -2.29
YDR029W	YDR029W	TUS1	Q06412	1307 aa		0.73	□□□□□ -2.29
YDR029W	YDR029W	OPY1	P38271	328 aa		0.73	□□□□□ -2.29
YDR029W	YDR029W	YHL042W	P38729	150 aa		0.73	□□□□□ -2.29
YDR029W	YDR029W	ARO8	P53090	500 aa	Known RBP	0.73	□□□□□ -2.29
YDR029W	YDR029W	BCY1	P07278	416 aa	Known RBP	0.72	□□□□□ -2.29
YDR029W	YDR029W	MRPL50	P53724	139 aa		0.72	□□□□□ -2.29
YDR029W	YDR029W	CWC27	Q02770	301 aa		0.72	□□□□□ -2.29
YDR029W	YDR029W	KAP95	Q06142	861 aa	Known RBP	0.72	□□□□□ -2.29
YDR029W	YDR029W	SLH1	P53327	1967 aa	Known RBP	0.71	□□□□□ -2.3
YDR029W	YDR029W	SPT3	P06844	337 aa		0.71	□□□□□ -2.3
YDR029W	YDR029W	RPT5	P33297	434 aa	Known RBP	0.71	□□□□□ -2.3
YDR029W	YDR029W	CUE1	P38428	203 aa		0.71	□□□□□ -2.3
YDR029W	YDR029W	GVP36	P40531	326 aa	Known RBP	0.71	□□□□□ -2.3
YDR029W	YDR029W	PAM18	Q07914	168 aa		0.71	□□□□□ -2.3
YDR029W	YDR029W	YOL107W	Q12239	342 aa		0.71	□□□□□ -2.3
YDR029W	YDR029W	YLR236C	A0A023PZG4	107 aa		0.7	□□□□□ -2.3
YDR029W	YDR029W	TIM9	O74700	87 aa		0.7	□□□□□ -2.3
YDR029W	YDR029W	MRPL25	P23369	157 aa		0.7	□□□□□ -2.3
YDR029W	YDR029W	CDC10	P25342	322 aa	Known RBP	0.7	□□□□□ -2.3
YDR029W	YDR029W	RIB7	P33312	244 aa		0.7	□□□□□ -2.3
YDR029W	YDR029W	TRM9	P49957	279 aa		0.7	□□□□□ -2.3
YDR029W	YDR029W	NSA1	P53136	463 aa	Predicted RBP	0.7	□□□□□ -2.3
YDR029W	YDR029W	PRM8	P53174	237 aa		0.7	□□□□□ -2.3
YDR029W	YDR029W	ATG31	Q12421	196 aa		0.7	□□□□□ -2.3
YDR029W	YDR029W	RRP36	Q12481	300 aa	Predicted RBP	0.7	□□□□□ -2.3
YDR029W	YDR029W	SEC11	P15367	167 aa		0.69	□□□□□ -2.3
YDR029W	YDR029W	RPO26	P20435	155 aa		0.69	□□□□□ -2.3
YDR029W	YDR029W	YBR285W	P38354	144 aa		0.69	□□□□□ -2.3
YDR029W	YDR029W	NUP84	P52891	726 aa		0.69	□□□□□ -2.3
YDR029W	YDR029W	YNL247W	P53852	767 aa	Known RBP	0.69	□□□□□ -2.3
YDR029W	YDR029W	CUE4	Q04201	117 aa	Predicted RBP	0.69	□□□□□ -2.3
YDR029W	YDR029W	YHR007C-A	Q07074	71 aa		0.69	□□□□□ -2.3
YDR029W	YDR029W	ACC1	Q00955	2233 aa	Known RBP	0.68	□□□□□ -2.3
YDR029W	YDR029W	YHR212W-A	P0CX91	67 aa		0.68	□□□□□ -2.3
YDR029W	YDR029W	SEC17	P32602	292 aa		0.68	□□□□□ -2.3
YDR029W	YDR029W	NTF2	P33331	125 aa	Known RBP	0.68	□□□□□ -2.3
YDR029W	YDR029W	EAF6	P47128	113 aa		0.68	□□□□□ -2.3
YDR029W	YDR029W	MCP1	Q12106	302 aa		0.68	□□□□□ -2.3
YDR029W	YDR029W	BNA6	P43619	295 aa		0.67	□□□□□ -2.3
YDR029W	YDR029W	RRT8	Q08219	342 aa		0.67	□□□□□ -2.3
YDR029W	YDR029W	SIR2	P06700	562 aa		0.66	□□□□□ -2.3
YDR029W	YDR029W	SKG1	P36169	355 aa		0.66	□□□□□ -2.3
YDR029W	YDR029W	VMA22	P38784	181 aa		0.66	□□□□□ -2.3
YDR029W	YDR029W	YNL134C	P53912	376 aa	Known RBP	0.66	□□□□□ -2.3
YDR029W	YDR029W	LCL2	Q08045	131 aa		0.66	□□□□□ -2.3
YDR029W	YDR029W	TDA8	Q6B2U8	126 aa		0.66	□□□□□ -2.3
YDR029W	YDR029W	YER034W	P40022	185 aa	Known RBP	0.65	□□□□□ -2.31
YDR029W	YDR029W	CDC123	Q05791	360 aa		0.65	□□□□□ -2.31
YDR029W	YDR029W	YLR173W	Q06247	608 aa		0.65	□□□□□ -2.31
YDR029W	YDR029W	RAD28	Q12021	506 aa		0.65	□□□□□ -2.31
YDR029W	YDR029W	TCA17	P32613	152 aa		0.64	□□□□□ -2.31
YDR029W	YDR029W	YUH1	P35127	236 aa		0.64	□□□□□ -2.31
YDR029W	YDR029W	PRE6	P40303	254 aa	Known RBP	0.64	□□□□□ -2.31
YDR029W	YDR029W	FAR7	P43592	221 aa		0.64	□□□□□ -2.31
YDR029W	YDR029W	SRL4	Q03085	281 aa		0.64	□□□□□ -2.31
YDR029W	YDR029W	DRS2	P39524	1355 aa		0.64	□□□□□ -2.31
YDR029W	YDR029W	URA6	P15700	204 aa		0.63	□□□□□ -2.31
YDR029W	YDR029W	DBF2	P22204	572 aa		0.63	□□□□□ -2.31
YDR029W	YDR029W	LDB7	P38210	180 aa		0.63	□□□□□ -2.31
YDR029W	YDR029W	HYR1	P40581	163 aa	Known RBP	0.63	□□□□□ -2.31
YDR029W	YDR029W	LIA1	P47120	325 aa	Known RBP	0.63	□□□□□ -2.31
YDR029W	YDR029W	YOL160W	Q08321	113 aa		0.63	□□□□□ -2.31
YDR029W	YDR029W	UTP30	P36144	274 aa	Known RBP	0.62	□□□□□ -2.31
YDR029W	YDR029W	MED4	Q12343	284 aa		0.62	□□□□□ -2.31
YDR029W	YDR029W	MDM35	O60200	86 aa		0.61	□□□□□ -2.31
YDR029W	YDR029W	URA5	P13298	226 aa	Known RBP	0.61	□□□□□ -2.31
YDR029W	YDR029W	FMC1	P40491	155 aa		0.61	□□□□□ -2.31
YDR029W	YDR029W	YFH7	P43591	353 aa		0.61	□□□□□ -2.31
YDR029W	YDR029W	RPC17	P47076	161 aa		0.61	□□□□□ -2.31
YDR029W	YDR029W	FYV6	P53913	173 aa		0.61	□□□□□ -2.31
YDR029W	YDR029W	YMR252C	Q04814	134 aa		0.61	□□□□□ -2.31
YDR029W	YDR029W	INO80	P53115	1489 aa		0.61	□□□□□ -2.31
YDR029W	YDR029W	CDC28	P00546	298 aa	Known RBP	0.6	□□□□□ -2.31
YDR029W	YDR029W	APS1	P35181	156 aa		0.6	□□□□□ -2.31
YDR029W	YDR029W	BRR6	P53062	197 aa		0.6	□□□□□ -2.31
YDR029W	YDR029W	YDR249C	Q03787	373 aa		0.6	□□□□□ -2.31
YDR029W	YDR029W	YLR283W	Q05867	314 aa		0.6	□□□□□ -2.31
YDR029W	YDR029W	MATALPHA1	P0CY06	175 aa		0.59	□□□□□ -2.31
YDR029W	YDR029W	HMLALPHA1	P0CY07	175 aa		0.59	□□□□□ -2.31
YDR029W	YDR029W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.59	□□□□□ -2.31	not detected
YDR029W	YDR029W	MIC26	P50087	233 aa		0.59	□□□□□ -2.31
YDR029W	YDR029W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.59	□□□□□ -2.31	not detected
YDR029W	YDR029W	KSS1	P14681	368 aa		0.58	□□□□□ -2.32
YDR029W	YDR029W	BET1	P22804	142 aa		0.58	□□□□□ -2.32
YDR029W	YDR029W	SSO1	P32867	290 aa		0.58	□□□□□ -2.32
YDR029W	YDR029W	YEA4	P40004	342 aa		0.58	□□□□□ -2.32
YDR029W	YDR029W	BXI1	P48558	297 aa		0.58	□□□□□ -2.32
YDR029W	YDR029W	YDR274C	P87283	123 aa		0.58	□□□□□ -2.32
YDR029W	YDR029W	PET117	Q02771	107 aa		0.58	□□□□□ -2.32
YDR029W	YDR029W	CDC36	P06100	191 aa	Predicted RBP	0.57	□□□□□ -2.32
YDR029W	YDR029W	RPL27A	P0C2H6	136 aa	Known RBP	0.57	□□□□□ -2.32
YDR029W	YDR029W	YCR016W	P25617	290 aa	Known RBP	0.57	□□□□□ -2.32
YDR029W	YDR029W	COX15	P40086	486 aa		0.57	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms