RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 C9orf131Q5VYM1 1079 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 CCDC62Q6P9F0 684 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 MMS22LQ6ZRQ5 1243 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 NLRP4Q96MN2 994 aa18.1■□□□□ 0.49
PHGDH-229ENST00000641891 IGKV6-21A0A0C4DH24 114 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 B4GALT5O43286 388 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 PPFIA2O75334 1257 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 IVLP07476 585 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 MYBL1P10243 752 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 NR1D1P20393 614 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 TBXAS1P24557 533 aaPredicted RBP18.09■□□□□ 0.49
PHGDH-229ENST00000641891 GJA5P36382 358 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 CLCN3P51790 818 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 OSTNP61366 133 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 MTMR3Q13615 1198 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 MAPK6Q16659 721 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 KDM7AQ6ZMT4 941 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 ZBTB8OSQ8IWT0 167 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 CCDC105Q8IYK2 499 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 C1orf54Q8WWF1 131 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 TCP11Q8WWU5 503 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 TRIM11Q96F44 468 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 ADAM22Q9P0K1 906 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 MTUS1Q9ULD2 1270 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 CNTN6Q9UQ52 1028 aa18.09■□□□□ 0.49
PHGDH-229ENST00000641891 MYZAPP0CAP1 466 aa18.08■□□□□ 0.49
PHGDH-229ENST00000641891 YBX3P16989 372 aaKnown RBP eCLIP18.08■□□□□ 0.492e-7■□□□□ 9.8
PHGDH-229ENST00000641891 CD58P19256 250 aa18.08■□□□□ 0.49
PHGDH-229ENST00000641891 MXD4Q14582 209 aaPredicted RBP18.08■□□□□ 0.49
PHGDH-229ENST00000641891 GJC2Q5T442 439 aaPredicted RBP18.08■□□□□ 0.49
PHGDH-229ENST00000641891 PLPPR4Q7Z2D5 763 aa18.08■□□□□ 0.49
PHGDH-229ENST00000641891 WDR49Q8IV35 697 aa18.08■□□□□ 0.49
PHGDH-229ENST00000641891 TMEM130Q8N3G9 435 aa18.08■□□□□ 0.49
PHGDH-229ENST00000641891 UBR7Q8N806 425 aa18.08■□□□□ 0.49
PHGDH-229ENST00000641891 MPHOSPH6Q99547 160 aaKnown RBP18.08■□□□□ 0.49
PHGDH-229ENST00000641891 GOLGA6L10A6NI86 522 aa18.08■□□□□ 0.48
PHGDH-229ENST00000641891 HMGB1P1B2RPK0 211 aaPredicted RBP18.08■□□□□ 0.48
PHGDH-229ENST00000641891 OGTO15294 1046 aa18.08■□□□□ 0.48
PHGDH-229ENST00000641891 EIF3HO15372 352 aaKnown RBP eCLIP18.08■□□□□ 0.48
PHGDH-229ENST00000641891 ASS1P00966 412 aaKnown RBP18.08■□□□□ 0.48
PHGDH-229ENST00000641891 TXNP10599 105 aaKnown RBP18.08■□□□□ 0.48
PHGDH-229ENST00000641891 OSBPP22059 807 aa18.08■□□□□ 0.48
PHGDH-229ENST00000641891 MCL1Q07820 350 aa18.08■□□□□ 0.48
PHGDH-229ENST00000641891 PTP4A2Q12974 167 aa18.08■□□□□ 0.48
PHGDH-229ENST00000641891 SNX1Q13596 522 aa18.08■□□□□ 0.48
PHGDH-229ENST00000641891 UBAP2Q5T6F2 1119 aaKnown RBP18.08■□□□□ 0.48
PHGDH-229ENST00000641891 THNSL1Q8IYQ7 743 aa18.08■□□□□ 0.48
PHGDH-229ENST00000641891 CEP120Q8N960 986 aa18.08■□□□□ 0.48
PHGDH-229ENST00000641891 PKNOX2Q96KN3 472 aa18.08■□□□□ 0.48
PHGDH-229ENST00000641891 EPB41L4BQ9H329 900 aa18.08■□□□□ 0.48
PHGDH-229ENST00000641891 EFCC1Q9HA90 598 aa18.08■□□□□ 0.48
PHGDH-229ENST00000641891 CWC15Q9P013 229 aaKnown RBP18.08■□□□□ 0.48
PHGDH-229ENST00000641891 CPSF3Q9UKF6 684 aaKnown RBP18.08■□□□□ 0.48
PHGDH-229ENST00000641891 CYP2C8P10632 490 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 HPDP32754 393 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-229ENST00000641891 ZNF132P52740 706 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 GUCY1A3Q02108 690 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 MAMLD1Q13495 774 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 ZNF394Q53GI3 561 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 EEF1DP3Q658K8 133 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 KCNV1Q6PIU1 500 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 SCARA5Q6ZMJ2 495 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.07■□□□□ 0.48
PHGDH-229ENST00000641891 ATG4AQ8WYN0 398 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 DDX27Q96GQ7 796 aaKnown RBP18.07■□□□□ 0.48
PHGDH-229ENST00000641891 IMPG2Q9BZV3 1241 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 MINDY3Q9H8M7 445 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 BCCIPQ9P287 314 aaKnown RBP eCLIP18.07■□□□□ 0.48
PHGDH-229ENST00000641891 FSCN2O14926 492 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 PROSCO94903 275 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 DRG2P55039 364 aaKnown RBP18.07■□□□□ 0.48
PHGDH-229ENST00000641891 TAS2R40P59535 323 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 TFAMQ00059 246 aaKnown RBP18.07■□□□□ 0.48
PHGDH-229ENST00000641891 LIN9Q5TKA1 542 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 TRIM72Q6ZMU5 477 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 EFCAB13Q8IY85 973 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 C12orf50Q8NA57 414 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-229ENST00000641891 C1orf131Q8NDD1 294 aaKnown RBP18.07■□□□□ 0.48
PHGDH-229ENST00000641891 ZNF606Q8WXB4 792 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 RNPEPQ9H4A4 650 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 CHST7Q9NS84 486 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 RSPH14Q9UHP6 348 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 PPME1Q9Y570 386 aa18.07■□□□□ 0.48
PHGDH-229ENST00000641891 INO80B-WBP1J3KQ70 363 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 PPFIA4O75335 1185 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 SHBGP04278 402 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 HOXC6P09630 235 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 BRD2P25440 801 aaKnown RBP18.06■□□□□ 0.48
PHGDH-229ENST00000641891 IGBP1P78318 339 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 EFCAB12Q6NXP0 572 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 PHF13Q86YI8 300 aaPredicted RBP18.06■□□□□ 0.48
PHGDH-229ENST00000641891 TMEM192Q8IY95 271 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 PPP1R16BQ96T49 567 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 INO80BQ9C086 356 aaPredicted RBP18.06■□□□□ 0.48
PHGDH-229ENST00000641891 SPON1Q9HCB6 807 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 LCMT1Q9UIC8 334 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 PODXLO00592 558 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 GAS2O43903 313 aaKnown RBP18.06■□□□□ 0.48
PHGDH-229ENST00000641891 IQCF3P0C7M6 154 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 PROZP22891 400 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms