RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 AGO2Q9UKV8 859 aaKnown RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 MYO5CQ9NQX4 1742 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 KIF21AQ7Z4S6 1674 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 FAM47DPA6NHR8 397 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ERVV-1B6SEH8 477 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 RNF103O00237 685 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ATP8B1O43520 1251 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 CYP2E1P05181 493 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 CDC27P30260 824 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ADD2P35612 726 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 PSMC5P62195 406 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 VSNL1P62760 191 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 SCRN1Q12765 414 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 TRAF7Q6Q0C0 670 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 DENND6AQ8IWF6 608 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ZNF614Q8N883 585 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 FAR2Q96K12 515 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 HEMGNQ9BXL5 484 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 JPH1Q9HDC5 661 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 RIC8BQ9NVN3 520 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 SEPT3Q9UH03 358 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 HACL1Q9UJ83 578 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 MAN1B1Q9UKM7 699 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ATP10AO60312 1499 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 DCDC2CA8MYV0 355 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 SLC16A4O15374 487 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 FOXP2O15409 715 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 TRIM13O60858 407 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 P4HBP07237 508 aaKnown RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ACADSBP45954 432 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 FNTAP49354 379 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 RBP5P82980 135 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 PTK6Q13882 451 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 NCF4Q15080 339 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 GJC2Q5T442 439 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ESRP1Q6NXG1 681 aaKnown RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 PPP1R18Q6NYC8 613 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 POMGNT2Q8NAT1 580 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 PABPC5Q96DU9 382 aaKnown RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 S100A13Q99584 98 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 TIPINQ9BVW5 301 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ASCC2Q9H1I8 757 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 KLHL31Q9H511 634 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 FBXO2Q9UK22 296 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ADAM30Q9UKF2 790 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 TTC7AQ9ULT0 858 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 A0A0D9SFI3 127 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 MAGEB2O15479 319 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 EGFRP00533 1210 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 TXNP10599 105 aaKnown RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 CCNE1P24864 410 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 SLC11A2P49281 568 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 RPS7P62081 194 aaKnown RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 PRKAA1Q13131 559 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 CUL3Q13618 768 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 SLC39A14Q15043 492 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 ALG11Q2TAA5 492 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 C16orf89Q6UX73 402 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 SMYD4Q8IYR2 804 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 CYGBQ8WWM9 190 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 MTERF3Q96E29 417 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 WDR41Q9HAD4 459 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 CYP4F11Q9HBI6 524 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 CRLS1Q9UJA2 301 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 COQ6Q9Y2Z9 468 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 GCC2Q8IWJ2 1684 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 H7C0S8 307 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 CHL1O00533 1208 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 SEC24DO94855 1032 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 NR3C1P04150 777 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 TNNI3P19429 210 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 CLK1P49759 484 aaKnown RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 EIF3EP60228 445 aaKnown RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 SLC7A5Q01650 507 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 HLA-DQA1Q5Y7H0 255 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 SLC20A1Q8WUM9 679 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 PPP1R36Q96LQ0 422 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 ELAC2Q9BQ52 826 aaKnown RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 APOL5Q9BWW9 433 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 ZCWPW1Q9H0M4 648 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 CYP39A1Q9NYL5 469 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 PPIEQ9UNP9 301 aaKnown RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 STON1Q9Y6Q2 735 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 A0A087X0T9 212 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 C2orf81A6NN90 581 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 C2CD2LO14523 706 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 GH1P01241 217 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 MPOP05164 745 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 MYL2P10916 166 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 ADORA1P30542 326 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 IL13P35225 146 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 NLRP11P59045 1033 aaKnown RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 TRIM32Q13049 653 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 PDIA2Q13087 525 aaKnown RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 PCSK7Q16549 785 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 NEK10Q6ZWH5 1172 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 VN1R5Q7Z5H4 357 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 SEPT12Q8IYM1 358 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 RBBP8Q99708 897 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms