RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 CCDC148Q8NFR7 591 aa11.37□□□□□ -0.59
SSX3-204ENST00000612497 ETNPPLQ8TBG4 499 aa11.37□□□□□ -0.59
SSX3-204ENST00000612497 ZFYVE19Q96K21 471 aa11.37□□□□□ -0.59
SSX3-204ENST00000612497 GPR88Q9GZN0 384 aa11.37□□□□□ -0.59
SSX3-204ENST00000612497 ASAH2Q9NR71 780 aa11.37□□□□□ -0.59
SSX3-204ENST00000612497 LAMA5O15230 3695 aa11.37□□□□□ -0.59
SSX3-204ENST00000612497 MAST4O15021 2626 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 CCDC196A0A1B0GTZ2 297 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 TMEM189-UBE2V1I3L0A0 370 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 CDX4O14627 284 aaPredicted RBP11.36□□□□□ -0.59
SSX3-204ENST00000612497 DCLK1O15075 740 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 RECQL4O94761 1208 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 P4HBP07237 508 aaKnown RBP11.36□□□□□ -0.59
SSX3-204ENST00000612497 GBP1P32455 592 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 CLCNKBP51801 687 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 TWF1Q12792 350 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 NAB2Q15742 525 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 TMEM132AQ24JP5 1023 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 COL28A1Q2UY09 1125 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 SLC8B1Q6J4K2 584 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 C4orf19Q8IY42 314 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 CAMKK1Q8N5S9 505 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 LEMD2Q8NC56 503 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 ASAP3Q8TDY4 903 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 HHIPQ96QV1 700 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 LXNQ9BS40 222 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 MKNK1Q9BUB5 465 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 SLC32A1Q9H598 525 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 XPNPEP1Q9NQW7 623 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 FOXD4L1Q9NU39 408 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 VPS54Q9P1Q0 977 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 CEP72Q9P209 647 aa11.36□□□□□ -0.59
SSX3-204ENST00000612497 ASXL3Q9C0F0 2248 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 CYP3A7-CYP3A51PA0A087WV96 503 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 SPAARA0A1B0GVQ0 90 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 DPYSL4O14531 572 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 ZBTB39O15060 712 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 TBX3O15119 743 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 PRPF3O43395 683 aaKnown RBP11.35□□□□□ -0.59
SSX3-204ENST00000612497 CYP3A7P24462 503 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 BRCC3P46736 316 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 EPHA5P54756 1037 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 NLRP5P59047 1200 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 EXOSC10Q01780 885 aaKnown RBP11.35□□□□□ -0.59
SSX3-204ENST00000612497 TNK2Q07912 1038 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 PPP2R5CQ13362 524 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 KARSQ15046 597 aaKnown RBP11.35□□□□□ -0.59
SSX3-204ENST00000612497 ARHGAP29Q52LW3 1261 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 ARID3BQ8IVW6 561 aaPredicted RBP11.35□□□□□ -0.59
SSX3-204ENST00000612497 SHKBP1Q8TBC3 707 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 TMEM209Q96SK2 561 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 NFKBIZQ9BYH8 718 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 LSG1Q9H089 658 aaKnown RBP11.35□□□□□ -0.59
SSX3-204ENST00000612497 POLR3BQ9NW08 1133 aaPredicted RBP11.35□□□□□ -0.59
SSX3-204ENST00000612497 RGL1Q9NZL6 768 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 DDX25Q9UHL0 483 aaKnown RBP11.35□□□□□ -0.59
SSX3-204ENST00000612497 GDAQ9Y2T3 454 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 ACACAQ13085 2346 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 PI4KAP42356 2102 aa11.35□□□□□ -0.59
SSX3-204ENST00000612497 A0A1W2PRU2 124 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 PATE3B3GLJ2 98 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 GLRA2P23416 452 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 RDXP35241 583 aaKnown RBP11.34□□□□□ -0.59
SSX3-204ENST00000612497 ARL2P36404 184 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 IRX4P78413 519 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 SIM1P81133 766 aaPredicted RBP11.34□□□□□ -0.59
SSX3-204ENST00000612497 GRSF1Q12849 480 aaKnown RBP eCLIP11.34□□□□□ -0.59
SSX3-204ENST00000612497 CTTNQ14247 550 aaKnown RBP11.34□□□□□ -0.59
SSX3-204ENST00000612497 NECTIN1Q15223 517 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 UPP1Q16831 310 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 ITPRIPL2Q3MIP1 535 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 GLRA4Q5JXX5 417 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 TPGS2Q68CL5 300 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 CD300LGQ6UXG3 332 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 DHX32Q7L7V1 743 aaKnown RBP11.34□□□□□ -0.59
SSX3-204ENST00000612497 NOSTRINQ8IVI9 506 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 LRRC3BQ96PB8 259 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 C22orf23Q9BZE7 217 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 ZSWIM4Q9H7M6 989 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 VAV3Q9UKW4 847 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 INVSQ9Y283 1065 aa11.34□□□□□ -0.59
SSX3-204ENST00000612497 GON4LQ3T8J9 2241 aa11.33□□□□□ -0.59
SSX3-204ENST00000612497 LRRIQ4A6NIV6 560 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 H7C4K7 107 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 N4BP3O15049 544 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 GABBR2O75899 941 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 RCAN1P53805 252 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 CYP4A11Q02928 519 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 AAMPQ13685 434 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 PTPAQ15257 358 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 EPHA7Q15375 998 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 STXBP5Q5T5C0 1151 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 MOXD1Q6UVY6 613 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 CYP2U1Q7Z449 544 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 TPH2Q8IWU9 490 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 CHCHD4Q8N4Q1 142 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 C3orf58Q8NDZ4 430 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 DYDC2Q96IM9 177 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 UROC1Q96N76 676 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 BBC3Q96PG8 261 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms