RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 KIAA1328Q86T90 577 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 ATRIPQ8WXE1 791 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 TRAIPQ9BWF2 469 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 DPP3Q9NY33 737 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 ITGA11Q9UKX5 1188 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 PQBP1O60828 265 aaKnown RBP16.3■□□□□ 0.2
VRK3-207ENST00000594092 KCNE1P15382 129 aa16.3■□□□□ 0.2
VRK3-207ENST00000594092 SELPP16109 830 aa16.3■□□□□ 0.2
VRK3-207ENST00000594092 TBXAS1P24557 533 aaPredicted RBP16.3■□□□□ 0.2
VRK3-207ENST00000594092 GFPT1Q06210 699 aaPredicted RBP16.3■□□□□ 0.2
VRK3-207ENST00000594092 GLRA4Q5JXX5 417 aa16.3■□□□□ 0.2
VRK3-207ENST00000594092 LRRC8DQ7L1W4 858 aa16.3■□□□□ 0.2
VRK3-207ENST00000594092 TAF4BQ92750 862 aa16.3■□□□□ 0.2
VRK3-207ENST00000594092 SYT11Q9BT88 431 aa16.3■□□□□ 0.2
VRK3-207ENST00000594092 RNF19AQ9NV58 838 aa16.3■□□□□ 0.2
VRK3-207ENST00000594092 ADAMTS1Q9UHI8 967 aa16.3■□□□□ 0.2
VRK3-207ENST00000594092 A0A087X0T9 212 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 SMIM28A0A1B0GU29 152 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 MEIS3P2A8K0S8 358 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 CYP26A1O43174 497 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 KIF5CO60282 957 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 FAM228BP0C875 321 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 COL6A1P12109 1028 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 ACO1P21399 889 aaKnown RBP16.29■□□□□ 0.2
VRK3-207ENST00000594092 POLR2BP30876 1174 aaKnown RBP16.29■□□□□ 0.2
VRK3-207ENST00000594092 GJA8P48165 433 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 GNG11P61952 73 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 SLC18A3Q16572 532 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 ANKRD33Q7Z3H0 272 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 OLIG1Q8TAK6 271 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 DIS3LQ8TF46 1054 aaKnown RBP16.29■□□□□ 0.2
VRK3-207ENST00000594092 JAKMIP2Q96AA8 810 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 C18orf25Q96B23 403 aaPredicted RBP16.29■□□□□ 0.2
VRK3-207ENST00000594092 TSPAN18Q96SJ8 248 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 ADAM2Q99965 735 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.29■□□□□ 0.2
VRK3-207ENST00000594092 NIF3L1Q9GZT8 377 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 TUBGCP4Q9UGJ1 667 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 DNAI1Q9UI46 699 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 AGAP1Q9UPQ3 857 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 PDCD11Q14690 1871 aaKnown RBP16.29■□□□□ 0.2
VRK3-207ENST00000594092 TLR3O15455 904 aaKnown RBP16.29■□□□□ 0.2
VRK3-207ENST00000594092 ZNF623O75123 536 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 ITGA4P13612 1032 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 ANXA13P27216 316 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 ATICP31939 592 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 RAB27AP51159 221 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 RBP5P82980 135 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 ZNF662Q6ZS27 426 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 MRPL10Q7Z7H8 261 aaKnown RBP16.29■□□□□ 0.2
VRK3-207ENST00000594092 HACE1Q8IYU2 909 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 TXLNBQ8N3L3 684 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 BEST2Q8NFU1 509 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 VRTNQ9H8Y1 702 aa16.29■□□□□ 0.2
VRK3-207ENST00000594092 UBQLN1Q9UMX0 589 aaKnown RBP16.29■□□□□ 0.2
VRK3-207ENST00000594092 PITPNM1O00562 1244 aa16.28■□□□□ 0.2
VRK3-207ENST00000594092 KRT86O43790 486 aa16.28■□□□□ 0.2
VRK3-207ENST00000594092 KRT5P13647 590 aa16.28■□□□□ 0.2
VRK3-207ENST00000594092 ARHGAP25P42331 645 aa16.28■□□□□ 0.2
VRK3-207ENST00000594092 VAV2P52735 878 aa16.28■□□□□ 0.2
VRK3-207ENST00000594092 AGMOQ6ZNB7 445 aa16.28■□□□□ 0.2
VRK3-207ENST00000594092 UBR7Q8N806 425 aa16.28■□□□□ 0.2
VRK3-207ENST00000594092 LPPQ93052 612 aa16.28■□□□□ 0.2
VRK3-207ENST00000594092 IFIH1Q9BYX4 1025 aaKnown RBP16.28■□□□□ 0.2
VRK3-207ENST00000594092 TSGA10Q9BZW7 698 aa16.28■□□□□ 0.2
VRK3-207ENST00000594092 PCDHA13Q9Y5I0 950 aa16.28■□□□□ 0.2
VRK3-207ENST00000594092 A0A0U1RQF3 1178 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 RCCD1A6NED2 376 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 DDX3XO00571 662 aaKnown RBP eCLIP16.27■□□□□ 0.23e-12■■□□□ 11.9
VRK3-207ENST00000594092 PTGESO14684 152 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 ASPAP45381 313 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 BMS1Q14692 1282 aaKnown RBP16.27■□□□□ 0.2
VRK3-207ENST00000594092 WDR72Q3MJ13 1102 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 ZNF667Q5HYK9 610 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 CCDC122Q5T0U0 273 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 C1orf53Q5VUE5 145 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 SLC47A2Q86VL8 602 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 VPS36Q86VN1 386 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 ANKLE1Q8NAG6 615 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 LNX1Q8TBB1 728 aaPredicted RBP16.27■□□□□ 0.2
VRK3-207ENST00000594092 EPS8L1Q8TE68 723 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 SLC20A1Q8WUM9 679 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 HPDLQ96IR7 371 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 ZFP42Q96MM3 310 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 ACP6Q9NPH0 428 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 LUC7LQ9NQ29 371 aaKnown RBP16.27■□□□□ 0.2
VRK3-207ENST00000594092 MYO1AQ9UBC5 1043 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 NXF1Q9UBU9 619 aaKnown RBP16.27■□□□□ 0.2
VRK3-207ENST00000594092 NOCTQ9UK39 431 aaKnown RBP16.27■□□□□ 0.2
VRK3-207ENST00000594092 POLIQ9UNA4 740 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 CNTN6Q9UQ52 1028 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 PCDHB4Q9Y5E5 795 aa16.27■□□□□ 0.2
VRK3-207ENST00000594092 DCDC2CA8MYV0 355 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 NBNO60934 754 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 STAU1O95793 577 aaKnown RBP16.26■□□□□ 0.19
VRK3-207ENST00000594092 ABL1P00519 1130 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 ATF7P17544 494 aaPredicted RBP16.26■□□□□ 0.19
VRK3-207ENST00000594092 CASQ1P31415 396 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 MAGEA1P43355 309 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 TERF1P54274 439 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms