RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 NPTX2P47972 431 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 POU5F1Q01860 360 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 MYBPC2Q14324 1141 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 KRT79Q5XKE5 535 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 MAP4K3Q8IVH8 894 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 CD302Q8IX05 232 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 ASB16Q96NS5 453 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 BHMT2Q9H2M3 363 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 KMT5AQ9NQR1 393 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 M0QZQ0 153 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 ABLIM1O14639 778 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 TOM1L1O75674 476 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 EDN1P05305 212 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 PSMC3P17980 439 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 TYMPP19971 482 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 STRN3Q13033 797 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 DGKKQ5KSL6 1271 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 SYNPOQ8N3V7 929 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 FBXL5Q9UKA1 691 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 RAB23Q9ULC3 237 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 KIF3AQ9Y496 699 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 NUP210Q8TEM1 1887 aaPredicted RBP12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 CITO14578 2027 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 JAK2O60674 1132 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 OAZ2O95190 189 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 LARGE1O95461 756 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 CEBPBP17676 345 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 U2AF2P26368 475 aaKnown RBP eCLIP12.28□□□□□ -0.448e-11■■■■□ 22.5
SMARCE1-214ENST00000578112 AARSP49588 968 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 SMTNP53814 917 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 FZD5Q13467 585 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 MFSD6LQ8IWD5 586 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 RABGGTAQ92696 567 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 BRD9Q9H8M2 597 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 ASAH2Q9NR71 780 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 HCFC1R1Q9NWW0 138 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 NUB1Q9Y5A7 615 aa12.28□□□□□ -0.44
SMARCE1-214ENST00000578112 CHADO15335 359 aa12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 NEK4P51957 841 aa12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 MCL1Q07820 350 aa12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 SMARCB1Q12824 385 aa12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 ZNF174Q15697 407 aa12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 RSPO4Q2I0M5 234 aaPredicted RBP12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 SLC5A9Q2M3M2 681 aa12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 CTXN3Q4LDR2 81 aa12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 C3orf58Q8NDZ4 430 aa12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 SNX29Q8TEQ0 813 aa12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 DDX12PQ92771 950 aa12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 MCRS1Q96EZ8 462 aa12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 CYP4F11Q9HBI6 524 aa12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 ZNF334Q9HCZ1 680 aaPredicted RBP12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 DDX19AQ9NUU7 478 aaKnown RBP12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 CACNG4Q9UBN1 327 aa12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 KIAA1024Q9UPX6 916 aa12.27□□□□□ -0.44
SMARCE1-214ENST00000578112 CCDC169A6NNP5 214 aa12.27□□□□□ -0.45
SMARCE1-214ENST00000578112 ADRB2P07550 413 aa12.27□□□□□ -0.45
SMARCE1-214ENST00000578112 MARCKSP29966 332 aaPredicted RBP12.27□□□□□ -0.45
SMARCE1-214ENST00000578112 BRCC3P46736 316 aa12.27□□□□□ -0.45
SMARCE1-214ENST00000578112 GNL2Q13823 731 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-214ENST00000578112 NOLC1Q14978 699 aaKnown RBP eCLIP12.27□□□□□ -0.45
SMARCE1-214ENST00000578112 TANGO2Q6ICL3 276 aa12.27□□□□□ -0.45
SMARCE1-214ENST00000578112 C1orf186Q6ZWK4 172 aa12.27□□□□□ -0.45
SMARCE1-214ENST00000578112 NETO1Q8TDF5 533 aa12.27□□□□□ -0.45
SMARCE1-214ENST00000578112 UBQLN1Q9UMX0 589 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-214ENST00000578112 DERAQ9Y315 318 aa12.27□□□□□ -0.45
SMARCE1-214ENST00000578112 ZNF263O14978 683 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 HIP1RO75146 1068 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 CLTAP09496 248 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 MYBP10242 640 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 PLS3P13797 630 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 PEX3P56589 373 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 SOX4Q06945 474 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 FAM78AQ5JUQ0 283 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 GLRA4Q5JXX5 417 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 RINT1Q6NUQ1 792 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 SPEM1Q8N4L4 309 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 C2orf15Q8WU43 125 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 DDX1Q92499 740 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 FAM3CQ92520 227 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 CORO1BQ9BR76 489 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 PLA2G2FQ9BZM2 168 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 MTF2Q9Y483 593 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 SHISA7A6NL88 538 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 PIGRP01833 764 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 RETP07949 1114 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 FCHO2Q0JRZ9 810 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 ST3GAL1Q11201 340 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 MAPK7Q13164 816 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 PTGDRQ13258 359 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 PTPAQ15257 358 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 ITIH5Q86UX2 942 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 DAW1Q8N136 415 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 CDV3Q9UKY7 258 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 ODF2LQ9ULJ1 636 aa12.26□□□□□ -0.45
SMARCE1-214ENST00000578112 KIF26AQ9ULI4 1882 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 LIG1P18858 919 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 MCM4P33991 863 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 ARHGAP29Q52LW3 1261 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 DTHD1Q6ZMT9 781 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 TAS1R3Q7RTX0 852 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms