RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 DCXO43602 365 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 SYKP43405 635 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 RAB33AQ14088 237 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 VARS2Q5ST30 1063 aaKnown RBP21.54■■□□□ 1.04
CMTM3-211ENST00000565922 CCDC149Q6ZUS6 474 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 RTL10Q7L3V2 364 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 RNF135Q8IUD6 432 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 FGFBP2Q9BYJ0 223 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 SERTAD1Q9UHV2 236 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 FBXW11Q9UKB1 542 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 HPSEQ9Y251 543 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 USTQ9Y2C2 406 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 CDY1Q9Y6F8 540 aa21.54■■□□□ 1.04
CMTM3-211ENST00000565922 SCN1AP35498 2009 aa21.53■■□□□ 1.04
CMTM3-211ENST00000565922 CCDC195A0A1B0GUA6 201 aa21.53■■□□□ 1.04
CMTM3-211ENST00000565922 ACTN4O43707 911 aaKnown RBP21.53■■□□□ 1.04
CMTM3-211ENST00000565922 NFICP08651 508 aa21.53■■□□□ 1.04
CMTM3-211ENST00000565922 OR1D2P34982 312 aa21.53■■□□□ 1.04
CMTM3-211ENST00000565922 ZNF280DQ6N043 979 aa21.53■■□□□ 1.04
CMTM3-211ENST00000565922 BRSK2Q8IWQ3 736 aa21.53■■□□□ 1.04
CMTM3-211ENST00000565922 CCDC34Q96HJ3 373 aa21.53■■□□□ 1.04
CMTM3-211ENST00000565922 FAM213AQ9BRX8 229 aa21.53■■□□□ 1.04
CMTM3-211ENST00000565922 OXCT2Q9BYC2 517 aaPredicted RBP21.53■■□□□ 1.04
CMTM3-211ENST00000565922 BLZF1Q9H2G9 400 aa21.53■■□□□ 1.04
CMTM3-211ENST00000565922 TSHZ2Q9NRE2 1034 aa21.53■■□□□ 1.04
CMTM3-211ENST00000565922 PCDHB8Q9UN66 801 aa21.53■■□□□ 1.04
CMTM3-211ENST00000565922 FAM237AA0A1B0GTK4 181 aa21.52■■□□□ 1.04
CMTM3-211ENST00000565922 EXTL3O43909 919 aa21.52■■□□□ 1.04
CMTM3-211ENST00000565922 PAPLNO95428 1278 aa21.52■■□□□ 1.04
CMTM3-211ENST00000565922 WEE2P0C1S8 567 aa21.52■■□□□ 1.04
CMTM3-211ENST00000565922 SPATA31D3P0C874 917 aa21.52■■□□□ 1.04
CMTM3-211ENST00000565922 IGFBP6P24592 240 aaPredicted RBP21.52■■□□□ 1.04
CMTM3-211ENST00000565922 SNRPFP62306 86 aaKnown RBP21.52■■□□□ 1.04
CMTM3-211ENST00000565922 EHHADHQ08426 723 aa21.52■■□□□ 1.04
CMTM3-211ENST00000565922 CUL4BQ13620 913 aa21.52■■□□□ 1.04
CMTM3-211ENST00000565922 SLC8B1Q6J4K2 584 aa21.52■■□□□ 1.04
CMTM3-211ENST00000565922 CRELD2Q6UXH1 353 aaPredicted RBP21.52■■□□□ 1.04
CMTM3-211ENST00000565922 SPATA31D4Q6ZUB0 917 aa21.52■■□□□ 1.04
CMTM3-211ENST00000565922 EPM2AIP1Q7L775 607 aaPredicted RBP21.52■■□□□ 1.04
CMTM3-211ENST00000565922 GPD1LQ8N335 351 aa21.52■■□□□ 1.04
CMTM3-211ENST00000565922 PLCD3Q8N3E9 789 aa21.52■■□□□ 1.04
CMTM3-211ENST00000565922 TDRD5Q8NAT2 981 aaKnown RBP21.52■■□□□ 1.04
CMTM3-211ENST00000565922 ZNF507Q8TCN5 953 aa21.52■■□□□ 1.04
CMTM3-211ENST00000565922 SMG7Q92540 1137 aaKnown RBP21.52■■□□□ 1.04
CMTM3-211ENST00000565922 ACSF2Q96CM8 615 aaPredicted RBP21.52■■□□□ 1.04
CMTM3-211ENST00000565922 IKZF4Q9H2S9 585 aa21.52■■□□□ 1.04
CMTM3-211ENST00000565922 PIDD1Q9HB75 910 aa21.52■■□□□ 1.04
CMTM3-211ENST00000565922 RBAKQ9NYW8 714 aaPredicted RBP21.52■■□□□ 1.04
CMTM3-211ENST00000565922 CDH22Q9UJ99 828 aa21.52■■□□□ 1.04
CMTM3-211ENST00000565922 TSC2P49815 1807 aa21.52■■□□□ 1.04
CMTM3-211ENST00000565922 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.51■■□□□ 1.03
CMTM3-211ENST00000565922 M0QZQ0 153 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 RFPL2O75678 378 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 ZMYND10O75800 440 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 HNRNPA1P09651 372 aaKnown RBP eCLIP21.51■■□□□ 1.03
CMTM3-211ENST00000565922 HOXA9P31269 272 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 AARSP49588 968 aaKnown RBP eCLIP21.51■■□□□ 1.03
CMTM3-211ENST00000565922 UVSSAQ2YD98 709 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 KANK3Q6NY19 840 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 DSTYKQ6XUX3 929 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 HS2ST1Q7LGA3 356 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 OTOP3Q7RTS5 596 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 KHSRPQ92945 711 aaKnown RBP eCLIP21.51■■□□□ 1.03
CMTM3-211ENST00000565922 HPS3Q969F9 1004 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 SAAL1Q96ER3 474 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 PAGE5Q96GU1 130 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 CHAMP1Q96JM3 812 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 CBWD1Q9BRT8 395 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 PRKD2Q9BZL6 878 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 EPHX3Q9H6B9 360 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 KIAA1586Q9HCI6 787 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 EXOC1Q9NV70 894 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 CGNQ9P2M7 1197 aaKnown RBP21.51■■□□□ 1.03
CMTM3-211ENST00000565922 MYO10Q9HD67 2058 aa21.51■■□□□ 1.03
CMTM3-211ENST00000565922 C8AP07357 584 aa21.5■■□□□ 1.03
CMTM3-211ENST00000565922 CASP1P29466 404 aa21.5■■□□□ 1.03
CMTM3-211ENST00000565922 YWHAHQ04917 246 aaPredicted RBP21.5■■□□□ 1.03
CMTM3-211ENST00000565922 PSMD2Q13200 908 aa21.5■■□□□ 1.03
CMTM3-211ENST00000565922 MRPL58Q14197 206 aaKnown RBP21.5■■□□□ 1.03
CMTM3-211ENST00000565922 SURF1Q15526 300 aa21.5■■□□□ 1.03
CMTM3-211ENST00000565922 CTXN3Q4LDR2 81 aa21.5■■□□□ 1.03
CMTM3-211ENST00000565922 PPM1LQ5SGD2 360 aa21.5■■□□□ 1.03
CMTM3-211ENST00000565922 C9orf57Q5W0N0 161 aa21.5■■□□□ 1.03
CMTM3-211ENST00000565922 USP37Q86T82 979 aa21.5■■□□□ 1.03
CMTM3-211ENST00000565922 FSIP1Q8NA03 581 aa21.5■■□□□ 1.03
CMTM3-211ENST00000565922 GLIS3Q8NEA6 775 aa21.5■■□□□ 1.03
CMTM3-211ENST00000565922 NOC3LQ8WTT2 800 aaKnown RBP21.5■■□□□ 1.03
CMTM3-211ENST00000565922 CACTINQ8WUQ7 758 aaKnown RBP21.5■■□□□ 1.03
CMTM3-211ENST00000565922 CCDC47Q96A33 483 aaKnown RBP21.5■■□□□ 1.03
CMTM3-211ENST00000565922 DPP3Q9NY33 737 aa21.5■■□□□ 1.03
CMTM3-211ENST00000565922 MUTYHQ9UIF7 546 aa21.5■■□□□ 1.03
CMTM3-211ENST00000565922 GOLGA6L4A6NEF3 574 aa21.49■■□□□ 1.03
CMTM3-211ENST00000565922 ADAM12O43184 909 aa21.49■■□□□ 1.03
CMTM3-211ENST00000565922 XYLBO75191 536 aa21.49■■□□□ 1.03
CMTM3-211ENST00000565922 ODC1P11926 461 aa21.49■■□□□ 1.03
CMTM3-211ENST00000565922 SP100P23497 879 aaPredicted RBP21.49■■□□□ 1.03
CMTM3-211ENST00000565922 GUCY2FP51841 1108 aa21.49■■□□□ 1.03
CMTM3-211ENST00000565922 NDUFA8P51970 172 aa21.49■■□□□ 1.03
CMTM3-211ENST00000565922 ROR1Q01973 937 aa21.49■■□□□ 1.03
CMTM3-211ENST00000565922 BMT2Q1RMZ1 405 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms