RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 KYAT1Q16773 422 aa14.8□□□□□ -0.04
SMAD3-214ENST00000560402 TPGS2Q68CL5 300 aa14.8□□□□□ -0.04
SMAD3-214ENST00000560402 ZNF280DQ6N043 979 aa14.8□□□□□ -0.04
SMAD3-214ENST00000560402 KCNK18Q7Z418 384 aa14.8□□□□□ -0.04
SMAD3-214ENST00000560402 BRAPQ7Z569 592 aa14.8□□□□□ -0.04
SMAD3-214ENST00000560402 SYT2Q8N9I0 419 aaPredicted RBP14.8□□□□□ -0.04
SMAD3-214ENST00000560402 APPL2Q8NEU8 664 aa14.8□□□□□ -0.04
SMAD3-214ENST00000560402 SUSD3Q96L08 255 aa14.8□□□□□ -0.04
SMAD3-214ENST00000560402 SPATA32Q96LK8 384 aa14.8□□□□□ -0.04
SMAD3-214ENST00000560402 ZMAT2Q96NC0 199 aaKnown RBP14.8□□□□□ -0.04
SMAD3-214ENST00000560402 OSBPL6Q9BZF3 934 aa14.8□□□□□ -0.04
SMAD3-214ENST00000560402 LARSQ9P2J5 1176 aaKnown RBP14.8□□□□□ -0.04
SMAD3-214ENST00000560402 ANKFY1Q9P2R3 1169 aa14.8□□□□□ -0.04
SMAD3-214ENST00000560402 MAFFQ9ULX9 164 aa14.8□□□□□ -0.04
SMAD3-214ENST00000560402 MRPS23Q9Y3D9 190 aaKnown RBP14.8□□□□□ -0.04
SMAD3-214ENST00000560402 WDR27A2RRH5 827 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 I3L4J1 428 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 PRRG1O14668 218 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 TBC1D4O60343 1298 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 ECI2O75521 394 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 ABLIM3O94929 683 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 RHOP08100 348 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 HARSP12081 509 aaKnown RBP14.79□□□□□ -0.04
SMAD3-214ENST00000560402 ATF2P15336 505 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 CDC25AP30304 524 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 GPC5P78333 572 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 MCL1Q07820 350 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 RESTQ13127 1097 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 MRPL58Q14197 206 aaKnown RBP14.79□□□□□ -0.04
SMAD3-214ENST00000560402 TMEM161BQ8NDZ6 487 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 AK8Q96MA6 479 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 DDX23Q9BUQ8 820 aaKnown RBP14.79□□□□□ -0.04
SMAD3-214ENST00000560402 OXCT2Q9BYC2 517 aaPredicted RBP14.79□□□□□ -0.04
SMAD3-214ENST00000560402 PLEKHA5Q9HAU0 1116 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 HCFC1R1Q9NWW0 138 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 ODF2LQ9ULJ1 636 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 SPTBN4Q9H254 2564 aa14.79□□□□□ -0.04
SMAD3-214ENST00000560402 KANSL1LA0AUZ9 987 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 ZNF197O14709 1029 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 CLDN3O15551 220 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 MICAL2O94851 1124 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 BMP15O95972 392 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 DCNP07585 359 aaKnown RBP14.78□□□□□ -0.04
SMAD3-214ENST00000560402 MAPTP10636 758 aaKnown RBP14.78□□□□□ -0.04
SMAD3-214ENST00000560402 PTPN2P17706 415 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 ABCD1P33897 745 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 SLC12A3P55017 1021 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 NCKAP1LP55160 1127 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 ZNF445P59923 1031 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 FOXK2Q01167 660 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 TMEM119Q4V9L6 283 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 SPECC1Q5M775 1068 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 C1orf210Q8IVY1 113 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 TCEAL8Q8IYN2 117 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 ADSSL1Q8N142 457 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 ELMOD1Q8N336 334 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 ANP32BQ92688 251 aaKnown RBP14.78□□□□□ -0.04
SMAD3-214ENST00000560402 BORCS6Q96GS4 357 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 PNMA5Q96PV4 448 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 TSPAN18Q96SJ8 248 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 BCO2Q9BYV7 579 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 FBXL5Q9UKA1 691 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 INSL5Q9Y5Q6 135 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 COL4A2P08572 1712 aa14.78□□□□□ -0.04
SMAD3-214ENST00000560402 VWA3AA6NCI4 1184 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 XPOTO43592 962 aaKnown RBP14.77□□□□□ -0.05
SMAD3-214ENST00000560402 LMNAP02545 664 aaKnown RBP14.77□□□□□ -0.05
SMAD3-214ENST00000560402 CLTAP09496 248 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 PLA2G4BP0C869 781 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 IGFBP6P24592 240 aaPredicted RBP14.77□□□□□ -0.05
SMAD3-214ENST00000560402 LRPAP1P30533 357 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 ZRSR1Q15695 479 aaKnown RBP14.77□□□□□ -0.05
SMAD3-214ENST00000560402 SLC10A6Q3KNW5 377 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 CTXN3Q4LDR2 81 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 CCDC183Q5T5S1 534 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 LEMD2Q8NC56 503 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 GPT2Q8TD30 523 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 ING5Q8WYH8 240 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 DNASE1L2Q92874 299 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 C18orf25Q96B23 403 aaPredicted RBP14.77□□□□□ -0.05
SMAD3-214ENST00000560402 ELSPBP1Q96BH3 223 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 KXD1Q9BQD3 176 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 RPP25Q9BUL9 199 aaKnown RBP14.77□□□□□ -0.05
SMAD3-214ENST00000560402 FOXQ1Q9C009 403 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 CYP4F11Q9HBI6 524 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 GDPD2Q9HCC8 539 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 AFF4Q9UHB7 1163 aaKnown RBP14.77□□□□□ -0.05
SMAD3-214ENST00000560402 UBQLN1Q9UMX0 589 aaKnown RBP14.77□□□□□ -0.05
SMAD3-214ENST00000560402 PCDHB8Q9UN66 801 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 TSC2P49815 1807 aa14.77□□□□□ -0.05
SMAD3-214ENST00000560402 SFI1A8K8P3 1242 aa14.76□□□□□ -0.05
SMAD3-214ENST00000560402 PIGRP01833 764 aa14.76□□□□□ -0.05
SMAD3-214ENST00000560402 CEBPBP17676 345 aa14.76□□□□□ -0.05
SMAD3-214ENST00000560402 CYP3A5P20815 502 aa14.76□□□□□ -0.05
SMAD3-214ENST00000560402 MATR3P43243 847 aaKnown RBP eCLIP14.76□□□□□ -0.05
SMAD3-214ENST00000560402 PPP2R3AQ06190 1150 aa14.76□□□□□ -0.05
SMAD3-214ENST00000560402 RAD51AP2Q09MP3 1159 aa14.76□□□□□ -0.05
SMAD3-214ENST00000560402 SNW1Q13573 536 aaKnown RBP14.76□□□□□ -0.05
SMAD3-214ENST00000560402 SLC5A9Q2M3M2 681 aa14.76□□□□□ -0.05
SMAD3-214ENST00000560402 ZSCAN23Q3MJ62 389 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms