RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 USTQ9Y2C2 406 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 NUB1Q9Y5A7 615 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 PCDHB13Q9Y5F0 798 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 BACE2Q9Y5Z0 518 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 CDY1Q9Y6F8 540 aa11.9□□□□□ -0.5
SPG11-216ENST00000559347 CLUHO75153 1309 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 ZNF318Q5VUA4 2279 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 ZMYND10O75800 440 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 OR1D2P34982 312 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 AARSP49588 968 aaKnown RBP eCLIP11.89□□□□□ -0.51
SPG11-216ENST00000559347 GUCY2FP51841 1108 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 ASIC1P78348 528 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 KRT85P78386 507 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 AMPD3Q01432 767 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 ROR1Q01973 937 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 RAB33AQ14088 237 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 PTPN21Q16825 1174 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 VARS2Q5ST30 1063 aaKnown RBP11.89□□□□□ -0.51
SPG11-216ENST00000559347 LIN9Q5TKA1 542 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 SPATA1Q5VX52 437 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 SLC8B1Q6J4K2 584 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 CRELD2Q6UXH1 353 aaPredicted RBP11.89□□□□□ -0.51
SPG11-216ENST00000559347 CYP26C1Q6V0L0 522 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 LEO1Q8WVC0 666 aaPredicted RBP11.89□□□□□ -0.51
SPG11-216ENST00000559347 SMG7Q92540 1137 aaKnown RBP11.89□□□□□ -0.51
SPG11-216ENST00000559347 HPS3Q969F9 1004 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 FAM212AQ96EL1 285 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 DERAQ9Y315 318 aa11.89□□□□□ -0.51
SPG11-216ENST00000559347 WDR27A2RRH5 827 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 PRR33A8MZF0 331 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 M0QZQ0 153 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 PPEF2O14830 753 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 EIF3DO15371 548 aaKnown RBP eCLIP11.88□□□□□ -0.51
SPG11-216ENST00000559347 TBC1D4O60343 1298 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 N4BP1O75113 896 aaKnown RBP11.88□□□□□ -0.51
SPG11-216ENST00000559347 PRPF6O94906 941 aaKnown RBP11.88□□□□□ -0.51
SPG11-216ENST00000559347 C8AP07357 584 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 PFKFB1P16118 471 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 GARTP22102 1010 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 CASP1P29466 404 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 HOXA9P31269 272 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 POU5F1Q01860 360 aaKnown RBP11.88□□□□□ -0.51
SPG11-216ENST00000559347 EHHADHQ08426 723 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 MRPL58Q14197 206 aaKnown RBP11.88□□□□□ -0.51
SPG11-216ENST00000559347 TMEM132DQ14C87 1099 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 POSTNQ15063 836 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 FAM26FQ5R3K3 315 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 ZNF280DQ6N043 979 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 BRSK2Q8IWQ3 736 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 EFCAB13Q8IY85 973 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 ZDHHC14Q8IZN3 488 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 SYCP3Q8IZU3 236 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 ZSWIM2Q8NEG5 633 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 BEST2Q8NFU1 509 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 SLC7A14Q8TBB6 771 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 EDAQ92838 391 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 SAAL1Q96ER3 474 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 SPATA32Q96LK8 384 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 C7orf25Q9BPX7 421 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 PYM1Q9BRP8 204 aaKnown RBP11.88□□□□□ -0.51
SPG11-216ENST00000559347 CBWD1Q9BRT8 395 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 PRKD2Q9BZL6 878 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 ASB7Q9H672 318 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 WDR6Q9NNW5 1121 aaKnown RBP11.88□□□□□ -0.51
SPG11-216ENST00000559347 PCDHB8Q9UN66 801 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 C2CD2Q9Y426 696 aa11.88□□□□□ -0.51
SPG11-216ENST00000559347 UBE4BO95155 1302 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 ANO9A1A5B4 782 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 ACTN4O43707 911 aaKnown RBP11.87□□□□□ -0.51
SPG11-216ENST00000559347 IL18RAPO95256 599 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 POU2F2P09086 479 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 HNRNPA1P09651 372 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPG11-216ENST00000559347 HOXD13P35453 343 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 WNT7BP56706 349 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 ZXDAP98168 799 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 BECN1Q14457 450 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 PPM1LQ5SGD2 360 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 STXBP4Q6ZWJ1 553 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 UNC13DQ70J99 1090 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 EPM2AIP1Q7L775 607 aaPredicted RBP11.87□□□□□ -0.51
SPG11-216ENST00000559347 OTOP3Q7RTS5 596 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 GRAMD1CQ8IYS0 662 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 PLCD3Q8N3E9 789 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 FAM213AQ9BRX8 229 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 BLZF1Q9H2G9 400 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 TMEM206Q9H813 350 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 FBXL5Q9UKA1 691 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 KCNH3Q9ULD8 1083 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 HPSEQ9Y251 543 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 ATP6V1DQ9Y5K8 247 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 OBSL1O75147 1896 aa11.87□□□□□ -0.51
SPG11-216ENST00000559347 A0A1B0GVL5 298 aa11.86□□□□□ -0.51
SPG11-216ENST00000559347 H7C4K7 107 aa11.86□□□□□ -0.51
SPG11-216ENST00000559347 PIRO00625 290 aa11.86□□□□□ -0.51
SPG11-216ENST00000559347 ABLIM3O94929 683 aa11.86□□□□□ -0.51
SPG11-216ENST00000559347 LDHAP00338 332 aaKnown RBP11.86□□□□□ -0.51
SPG11-216ENST00000559347 COL9A1P20849 921 aa11.86□□□□□ -0.51
SPG11-216ENST00000559347 CMA1P23946 247 aa11.86□□□□□ -0.51
SPG11-216ENST00000559347 AFMP43652 599 aa11.86□□□□□ -0.51
SPG11-216ENST00000559347 CUL4BQ13620 913 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms