RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 LRRN2O75325 713 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 MAFO75444 373 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-219ENST00000553488 PSMD10O75832 226 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 GLUD1P00367 558 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 URODP06132 367 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 AMPD1P23109 780 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 GLUD2P49448 558 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 CDC42EP1Q00587 391 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 DSC1Q08554 894 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 NONOQ15233 471 aaKnown RBP eCLIP8.15□□□□□ -1.1
ATXN3-219ENST00000553488 ADCK5Q3MIX3 580 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 XKR3Q5GH77 459 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 SPECC1Q5M775 1068 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 KIAA0319Q5VV43 1072 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 SYNE3Q6ZMZ3 975 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 C20orf204Q6ZNR8 217 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 TAS1R1Q7RTX1 841 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 CATSPER4Q7RTX7 472 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 RHPN2Q8IUC4 686 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 KSR1Q8IVT5 923 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 COLGALT2Q8IYK4 626 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 RDM1Q8NG50 284 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 URGCPQ8TCY9 931 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 SMG7Q92540 1137 aaKnown RBP8.15□□□□□ -1.1
ATXN3-219ENST00000553488 BHMTQ93088 406 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 DDX23Q9BUQ8 820 aaKnown RBP8.15□□□□□ -1.1
ATXN3-219ENST00000553488 TEKT3Q9BXF9 490 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 FOXQ1Q9C009 403 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 MINDY3Q9H8M7 445 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 C6orf50Q9HD87 102 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 SUCLA2Q9P2R7 463 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-219ENST00000553488 NUMBLQ9Y6R0 609 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 SPEGQ15772 3267 aa8.15□□□□□ -1.11
ATXN3-219ENST00000553488 WDFY3Q8IZQ1 3526 aa8.15□□□□□ -1.11
ATXN3-219ENST00000553488 BAHCC1Q9P281 2608 aa8.15□□□□□ -1.11
ATXN3-219ENST00000553488 GAS7O60861 476 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 C1RP00736 705 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 POMCP01189 267 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 LAMP2P13473 410 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 NCLP19338 710 aaKnown RBP8.14□□□□□ -1.11
ATXN3-219ENST00000553488 HOXA11P31270 313 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-219ENST00000553488 ADH7P40394 386 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 AK2P54819 239 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 STARD6P59095 220 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 DSG1Q02413 1049 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 RSPO4Q2I0M5 234 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-219ENST00000553488 LRCH2Q5VUJ6 765 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 PLA2G4FQ68DD2 849 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 ANO5Q75V66 913 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 GET4Q7L5D6 327 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-219ENST00000553488 DHX32Q7L7V1 743 aaKnown RBP8.14□□□□□ -1.11
ATXN3-219ENST00000553488 TREML1Q86YW5 311 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 SMG8Q8ND04 991 aaKnown RBP8.14□□□□□ -1.11
ATXN3-219ENST00000553488 CCDC12Q8WUD4 166 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-219ENST00000553488 HDAC7Q8WUI4 952 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 PGBD4Q96DM1 585 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 TRIM11Q96F44 468 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 NLRP4Q96MN2 994 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 MBOAT7Q96N66 472 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 INO80BQ9C086 356 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-219ENST00000553488 ANO2Q9NQ90 1003 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 CHST7Q9NS84 486 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 ZDHHC7Q9NXF8 308 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 FAN1Q9Y2M0 1017 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 PRG3Q9Y2Y8 225 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-219ENST00000553488 SIT1Q9Y3P8 196 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 KCNMB2Q9Y691 235 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 SPAG17Q6Q759 2223 aa8.14□□□□□ -1.11
ATXN3-219ENST00000553488 PDCD11Q14690 1871 aaKnown RBP8.13□□□□□ -1.11
ATXN3-219ENST00000553488 PRPF3O43395 683 aaKnown RBP8.13□□□□□ -1.11
ATXN3-219ENST00000553488 TGM5O43548 720 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 KINO60870 393 aaKnown RBP8.13□□□□□ -1.11
ATXN3-219ENST00000553488 MAP3K6O95382 1288 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 TDP2O95551 362 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 ALDH2P05091 517 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 MYBP10242 640 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 EPB42P16452 691 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 ALAS2P22557 587 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 GNA11P29992 359 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 NTRK3Q16288 839 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 ZNF528Q3MIS6 628 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 Q4G0T1 1027 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 LILRA6Q6PI73 481 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 DCLRE1AQ6PJP8 1040 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 MIER3Q7Z3K6 550 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 ST13P5Q8NFI4 369 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-219ENST00000553488 ETNPPLQ8TBG4 499 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 NELL1Q92832 810 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 FGF14Q92915 247 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 CCDC136Q96JN2 1154 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 B3GALT6Q96L58 329 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 MKNK1Q9BUB5 465 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 RPP25Q9BUL9 199 aaKnown RBP8.13□□□□□ -1.11
ATXN3-219ENST00000553488 NT5C3AQ9H0P0 336 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 PLEKHA4Q9H4M7 779 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.13□□□□□ -1.11
ATXN3-219ENST00000553488 ZFATQ9P243 1243 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 KANSL3Q9P2N6 904 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 DPP7Q9UHL4 492 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 SSX2IPQ9Y2D8 614 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms