RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 DARSP14868 501 aaKnown RBP9.5□□□□□ -0.89
DDB1-213ENST00000539332 EIF4BP23588 611 aaKnown RBP9.5□□□□□ -0.89
DDB1-213ENST00000539332 GJA8P48165 433 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 CDK7P50613 346 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 CRYBB1P53674 252 aaPredicted RBP9.5□□□□□ -0.89
DDB1-213ENST00000539332 AP3M2P53677 418 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 PTK2Q05397 1052 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 PTK7Q13308 1070 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 MAP9Q49MG5 647 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 C10orf76Q5T2E6 689 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 EEF1DP3Q658K8 133 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 SND1Q7KZF4 910 aaKnown RBP eCLIP9.5□□□□□ -0.893e-6■■□□□ 14.4
DDB1-213ENST00000539332 KIAA1328Q86T90 577 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 RSPH3Q86UC2 560 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 HELQQ8TDG4 1101 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 TAS1R2Q8TE23 839 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 TMEM40Q8WWA1 233 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 FAM81BQ96LP2 452 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 KREMEN1Q96MU8 473 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 SEZ6LQ9BYH1 1024 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 CELF4Q9BZC1 486 aaKnown RBP9.5□□□□□ -0.89
DDB1-213ENST00000539332 IRX2Q9BZI1 471 aaPredicted RBP9.5□□□□□ -0.89
DDB1-213ENST00000539332 TRPV6Q9H1D0 765 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 CDT1Q9H211 546 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 PDE11AQ9HCR9 933 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 VPS18Q9P253 973 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 TRIM10Q9UDY6 481 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 NOD1Q9Y239 953 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 BTNL10A8MVZ5 291 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 H3BQF6 201 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 B4GALT4O60513 344 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 ERLIN2O94905 339 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 VNN1O95497 513 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 DLATP10515 647 aaKnown RBP9.5□□□□□ -0.89
DDB1-213ENST00000539332 MCF2P10911 925 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 CORO7P57737 925 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 GCNT1Q02742 428 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 GFPT1Q06210 699 aaPredicted RBP9.5□□□□□ -0.89
DDB1-213ENST00000539332 SNX17Q15036 470 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 SURF1Q15526 300 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 CCDC122Q5T0U0 273 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 TDRD10Q5VZ19 366 aaKnown RBP9.5□□□□□ -0.89
DDB1-213ENST00000539332 FAM43BQ6ZT52 329 aaPredicted RBP9.5□□□□□ -0.89
DDB1-213ENST00000539332 ENOSF1Q7L5Y1 443 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 WDR49Q8IV35 697 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 SUGP1Q8IWZ8 645 aaKnown RBP9.5□□□□□ -0.89
DDB1-213ENST00000539332 FAM71AQ8IYT1 594 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 SLC30A5Q8TAD4 765 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 SREK1Q8WXA9 508 aaKnown RBP9.5□□□□□ -0.89
DDB1-213ENST00000539332 DHX38Q92620 1227 aaKnown RBP9.5□□□□□ -0.89
DDB1-213ENST00000539332 SGSM3Q96HU1 749 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 NT5C1BQ96P26 610 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 FNBP1Q96RU3 617 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 SENP6Q9GZR1 1112 aaPredicted RBP9.5□□□□□ -0.89
DDB1-213ENST00000539332 PDZD7Q9H5P4 517 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 UBE2TQ9NPD8 197 aaPredicted RBP9.5□□□□□ -0.89
DDB1-213ENST00000539332 L1RE1Q9UN81 338 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 CTAGE9A4FU28 777 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 M0QZ92 97 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 FOXN3O00409 490 aaPredicted RBP9.49□□□□□ -0.89
DDB1-213ENST00000539332 TSPAN1O60635 241 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 HLA-DRAP01903 254 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 CHRNA1P02708 482 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 CTSHP09668 335 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 CCDC172P0C7W6 258 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 CHRM1P11229 460 aaPredicted RBP9.49□□□□□ -0.89
DDB1-213ENST00000539332 ARF4P18085 180 aaPredicted RBP9.49□□□□□ -0.89
DDB1-213ENST00000539332 FGFR4P22455 802 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 HOXD11P31277 338 aaPredicted RBP9.49□□□□□ -0.89
DDB1-213ENST00000539332 THPOP40225 353 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 USP8P40818 1118 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 TNFSF9P41273 254 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 MAGEA1P43355 309 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 AARSP49588 968 aaKnown RBP eCLIP9.49□□□□□ -0.89
DDB1-213ENST00000539332 PCBP1Q15365 356 aaKnown RBP eCLIP9.49□□□□□ -0.89
DDB1-213ENST00000539332 NAB2Q15742 525 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 ENOX2Q16206 610 aaKnown RBP9.49□□□□□ -0.89
DDB1-213ENST00000539332 TRIM71Q2Q1W2 868 aaKnown RBP9.49□□□□□ -0.89
DDB1-213ENST00000539332 ZNF568Q3ZCX4 644 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 WDR93Q6P2C0 686 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 SLC35F6Q8N357 371 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 TCHPQ9BT92 498 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 LUC7LQ9NQ29 371 aaKnown RBP9.49□□□□□ -0.89
DDB1-213ENST00000539332 NAGPAQ9UK23 515 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 INTUQ9ULD6 942 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 JRKLQ9Y4A0 524 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 TRPV2Q9Y5S1 764 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 CDY2AQ9Y6F7 541 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 SCN1AP35498 2009 aa9.49□□□□□ -0.89
DDB1-213ENST00000539332 A0A1B0GUA9 196 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 CTAGE15A4D2H0 777 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 DDX3XO00571 662 aaKnown RBP eCLIP9.48□□□□□ -0.89
DDB1-213ENST00000539332 IL18RAPO95256 599 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 CTAGE8P0CG41 777 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 COL6A1P12109 1028 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 MATR3P43243 847 aaKnown RBP eCLIP9.48□□□□□ -0.89
DDB1-213ENST00000539332 MFAP3P55082 362 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 ARID5AQ03989 594 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 MGAT3Q09327 533 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 KIF5AQ12840 1032 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms