RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 IL18RAPO95256 599 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 WEE2P0C1S8 567 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 SLFN14P0C7P3 912 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 SPATA31D3P0C874 917 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 MCM4P33991 863 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 OR1D2P34982 312 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 AARSP49588 968 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 SPAG1Q07617 926 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 TMEM31Q5JXX7 168 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 VARS2Q5ST30 1063 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 JADE1Q6IE81 842 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 SLC8B1Q6J4K2 584 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 CRELD2Q6UXH1 353 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 SPATA31D4Q6ZUB0 917 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 UNC13DQ70J99 1090 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 NT5DC4Q86YG4 428 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 CEP57L1Q8IYX8 460 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 ZDHHC14Q8IZN3 488 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 APPL2Q8NEU8 664 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 FAM212AQ96EL1 285 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 PRKD2Q9BZL6 878 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 CDH22Q9UJ99 828 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 PCDHB8Q9UN66 801 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 MUC3AQ02505 3323 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 FAM237AA0A1B0GTK4 181 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 ADAM12O43184 909 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 RFPL2O75678 378 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 HNRNPA1P09651 372 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 HOXA9P31269 272 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 EHHADHQ08426 723 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 TMEM132DQ14C87 1099 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 CCDC149Q6ZUS6 474 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 EPM2AIP1Q7L775 607 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 OTOP3Q7RTS5 596 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 ZNF461Q8TAF7 563 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 ZNF507Q8TCN5 953 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 SMG7Q92540 1137 aaKnown RBP13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 EDAQ92838 391 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 ZNF707Q96C28 371 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 ACSF2Q96CM8 615 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 OXCT2Q9BYC2 517 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 FGFBP2Q9BYJ0 223 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 IKZF4Q9H2S9 585 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 WDR6Q9NNW5 1121 aaKnown RBP13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 MUTYHQ9UIF7 546 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 HPSEQ9Y251 543 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 CDY1Q9Y6F8 540 aa13.14□□□□□ -0.31
TRAPPC4-209ENST00000528230 SCN1AP35498 2009 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 C5orf42Q9H799 3197 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 ANO9A1A5B4 782 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 C2CD4DB7Z1M9 353 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 PIRO00625 290 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 EXTL3O43909 919 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 ABLIM3O94929 683 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 OAZ2O95190 189 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 MYL1P05976 194 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 NFICP08651 508 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 POU2F2P09086 479 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 LILRA4P59901 499 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 SNRPFP62306 86 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 NUCB2P80303 420 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 FAM26FQ5R3K3 315 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 LIN9Q5TKA1 542 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 C9orf57Q5W0N0 161 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 RSPO2Q6UXX9 243 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 TDRD5Q8NAT2 981 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 LRFN3Q9BTN0 628 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 PIDD1Q9HB75 910 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 C11orf16Q9NQ32 467 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 TSHZ2Q9NRE2 1034 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 SERTAD1Q9UHV2 236 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 MAFFQ9ULX9 164 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 UBE4BO95155 1302 aa13.13□□□□□ -0.31
TRAPPC4-209ENST00000528230 DOCK6Q96HP0 2047 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 A0A1B0GVL5 298 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 A0A1W2PQ27 194 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 A0A1W2PQ64 194 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 A0A1W2PQD8 194 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 ARHGEF37A1IGU5 675 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 PRR33A8MZF0 331 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 ACTN4O43707 911 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 C8AP07357 584 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 PFKFB1P16118 471 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 TYMPP19971 482 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 HOXD13P35453 343 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 AFMP43652 599 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 ZXDAP98168 799 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 CUL4BQ13620 913 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 PTPN21Q16825 1174 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 CTXN3Q4LDR2 81 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 PPM1LQ5SGD2 360 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 TPGS2Q68CL5 300 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 ZNF280DQ6N043 979 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 ARMCX5Q6P1M9 558 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 DSTYKQ6XUX3 929 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 BRSK2Q8IWQ3 736 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 GPD1LQ8N335 351 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 FEZF2Q8TBJ5 459 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 CACTINQ8WUQ7 758 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 HPS3Q969F9 1004 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms