RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 NCKAP1LP55160 1127 aa11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 SNW1Q13573 536 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 ZC2HC1CQ53FD0 456 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 CWF19L1Q69YN2 538 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 DSTYKQ6XUX3 929 aa11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 USP49Q70CQ1 688 aa11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 APPL2Q8NEU8 664 aa11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 CLIC6Q96NY7 704 aa11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 RPF1Q9H9Y2 349 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 TBC1D17Q9HA65 648 aa11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 FBXL5Q9UKA1 691 aa11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 ODF2LQ9ULJ1 636 aa11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 ZFP37Q9Y6Q3 630 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 TRIP11Q15643 1979 aa11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 VPS13AQ96RL7 3174 aa11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 USP34Q70CQ2 3546 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 PTPRZ1P23471 2315 aaPredicted RBP11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 MTCL1Q9Y4B5 1905 aaKnown RBP11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 WDR27A2RRH5 827 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 ANKRD63C9JTQ0 380 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 SYN3O14994 580 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 SLC26A4O43511 780 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 GFRA3O60609 400 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 DCNP07585 359 aaKnown RBP11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 RHOP08100 348 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 CPB1P15086 417 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 AOC1P19801 751 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 SYT1P21579 422 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 HOXA9P31269 272 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 ACOT2P49753 483 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 PPP2R3AQ06190 1150 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 ADCY1Q08828 1119 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 CUL4AQ13619 759 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 ENOX2Q16206 610 aaKnown RBP11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 RRAGBQ5VZM2 374 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 USP37Q86T82 979 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 KRI1Q8N9T8 703 aaKnown RBP11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 DTWD2Q8NBA8 298 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 DDX12PQ92771 950 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 SUSD3Q96L08 255 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 RTP3Q9BQQ7 232 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 PLEKHA5Q9HAU0 1116 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 TBC1D7Q9P0N9 293 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 CCDC39Q9UFE4 941 aa11.14□□□□□ -0.63
CTNNA1-235ENST00000522730 TTC26A0AVF1 554 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 TISP43B9A030 160 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 OGTO15294 1046 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 ABLIM3O94929 683 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 PAPLNO95428 1278 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 OR4Q2P0C623 313 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 MYL4P12829 197 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 ATF2P15336 505 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 YWHAHQ04917 246 aaPredicted RBP11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 MRPL58Q14197 206 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 SLC5A9Q2M3M2 681 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 CYP4A22Q5TCH4 519 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 FOXD4L5Q5VV16 416 aaPredicted RBP11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 ADALQ6DHV7 355 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 SLC8B1Q6J4K2 584 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 ZNF280DQ6N043 979 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 RNF19BQ6ZMZ0 732 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 MTSS1LQ765P7 747 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 FRMD5Q7Z6J6 570 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 NPAS3Q8IXF0 933 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 HS6ST3Q8IZP7 471 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 ELMOD1Q8N336 334 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 NOC3LQ8WTT2 800 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 FOXD4L4Q8WXT5 416 aaPredicted RBP11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 LARP4BQ92615 738 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 TCEAL4Q96EI5 215 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 ZNF512Q96ME7 567 aaPredicted RBP11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 PGLYRP2Q96PD5 576 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 FOXQ1Q9C009 403 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 IKZF4Q9H2S9 585 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 ARHGEF3Q9NR81 526 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 UBQLN1Q9UMX0 589 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 PCDHB8Q9UN66 801 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 SIT1Q9Y3P8 196 aa11.13□□□□□ -0.63
CTNNA1-235ENST00000522730 DENND4AQ7Z401 1863 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 VWA8A3KMH1 1905 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 CFAP54Q96N23 3096 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 A0A0B4J269 797 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 PPEF2O14830 753 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 XPOTO43592 962 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 TBC1D4O60343 1298 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 LRRN2O75325 713 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 GJA1P17302 382 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 CEBPBP17676 345 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 CD72P21854 359 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 ANP32AP39687 249 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 TXLNAP40222 546 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 ZNF131P52739 623 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 TWF1Q12792 350 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 RESTQ13127 1097 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 PTPAQ15257 358 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 ANGPT1Q15389 498 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 KYAT1Q16773 422 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 SLC44A4Q53GD3 710 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 TPGS2Q68CL5 300 aa11.12□□□□□ -0.63
CTNNA1-235ENST00000522730 JADE1Q6IE81 842 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms